RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 XAGE2Q96GT9 111 aa19.43■□□□□ 0.7
TSPAN4-201ENST00000346501 ZBED3Q96IU2 234 aaPredicted RBP19.43■□□□□ 0.7
TSPAN4-201ENST00000346501 PRMT6Q96LA8 375 aaPredicted RBP19.43■□□□□ 0.7
TSPAN4-201ENST00000346501 MRIQ9BWK5 157 aa19.43■□□□□ 0.7
TSPAN4-201ENST00000346501 ZNF646O15015 1829 aaPredicted RBP19.43■□□□□ 0.7
TSPAN4-201ENST00000346501 COL1A1P02452 1464 aaPredicted RBP19.42■□□□□ 0.7
TSPAN4-201ENST00000346501 CLRN2A0PK11 232 aa19.42■□□□□ 0.7
TSPAN4-201ENST00000346501 LDHBP07195 334 aaKnown RBP19.42■□□□□ 0.7
TSPAN4-201ENST00000346501 HSPA1AP0DMV8 641 aaKnown RBP19.42■□□□□ 0.7
TSPAN4-201ENST00000346501 HSPA1BP0DMV9 641 aaKnown RBP19.42■□□□□ 0.7
TSPAN4-201ENST00000346501 MAP2K2P36507 400 aa19.42■□□□□ 0.7
TSPAN4-201ENST00000346501 PHKA1P46020 1223 aa19.42■□□□□ 0.7
TSPAN4-201ENST00000346501 SUPT20HL1Q3ZLR7 823 aa19.42■□□□□ 0.7
TSPAN4-201ENST00000346501 RGMBQ6NW40 437 aa19.42■□□□□ 0.7
TSPAN4-201ENST00000346501 RPAP2Q8IXW5 612 aaPredicted RBP19.42■□□□□ 0.7
TSPAN4-201ENST00000346501 CCDC102AQ96A19 550 aa19.42■□□□□ 0.7
TSPAN4-201ENST00000346501 DEFB129Q9H1M3 183 aa19.42■□□□□ 0.7
TSPAN4-201ENST00000346501 GPR108Q9NPR9 543 aa19.42■□□□□ 0.7
TSPAN4-201ENST00000346501 ZNF157P51786 506 aaPredicted RBP19.41■□□□□ 0.7
TSPAN4-201ENST00000346501 SPTY2D1Q68D10 685 aaPredicted RBP19.41■□□□□ 0.7
TSPAN4-201ENST00000346501 CEP85Q6P2H3 762 aa19.41■□□□□ 0.7
TSPAN4-201ENST00000346501 DLK2Q6UY11 383 aa19.41■□□□□ 0.7
TSPAN4-201ENST00000346501 ARMC9Q7Z3E5 817 aa19.41■□□□□ 0.7
TSPAN4-201ENST00000346501 SLF2Q8IX21 1173 aa19.41■□□□□ 0.7
TSPAN4-201ENST00000346501 ZBTB22O15209 634 aa19.4■□□□□ 0.7
TSPAN4-201ENST00000346501 UQCRFS1P1P0C7P4 283 aa19.4■□□□□ 0.7
TSPAN4-201ENST00000346501 ADORA1P30542 326 aa19.4■□□□□ 0.7
TSPAN4-201ENST00000346501 NOGQ13253 232 aa19.4■□□□□ 0.7
TSPAN4-201ENST00000346501 CCDC158Q5M9N0 1113 aa19.4■□□□□ 0.7
TSPAN4-201ENST00000346501 SCAF8Q9UPN6 1271 aaKnown RBP19.4■□□□□ 0.7
TSPAN4-201ENST00000346501 NOP58Q9Y2X3 529 aaKnown RBP19.4■□□□□ 0.7
TSPAN4-201ENST00000346501 PPP1R12BO60237 982 aaPredicted RBP19.39■□□□□ 0.69
TSPAN4-201ENST00000346501 PRAMEF18Q5VWM3 479 aa19.39■□□□□ 0.69
TSPAN4-201ENST00000346501 HHIPL2Q6UWX4 724 aa19.39■□□□□ 0.69
TSPAN4-201ENST00000346501 TDRD3Q9H7E2 651 aaKnown RBP19.39■□□□□ 0.69
TSPAN4-201ENST00000346501 ZNF70Q9UC06 446 aaPredicted RBP19.39■□□□□ 0.69
TSPAN4-201ENST00000346501 SALL1Q9NSC2 1324 aa19.39■□□□□ 0.69
TSPAN4-201ENST00000346501 MYH13Q9UKX3 1938 aa19.39■□□□□ 0.69
TSPAN4-201ENST00000346501 PDS5AQ29RF7 1337 aaKnown RBP19.38■□□□□ 0.69
TSPAN4-201ENST00000346501 SPDYE2Q495Y8 402 aa19.38■□□□□ 0.69
TSPAN4-201ENST00000346501 DZIP1Q86YF9 867 aaKnown RBP19.38■□□□□ 0.69
TSPAN4-201ENST00000346501 ARAP2Q8WZ64 1704 aa19.38■□□□□ 0.69
TSPAN4-201ENST00000346501 ZDHHC15Q96MV8 337 aa19.38■□□□□ 0.69
TSPAN4-201ENST00000346501 ABCF2Q9UG63 623 aa19.38■□□□□ 0.69
TSPAN4-201ENST00000346501 RASGRF1Q13972 1273 aa19.37■□□□□ 0.69
TSPAN4-201ENST00000346501 TNNI3KQ59H18 835 aa19.37■□□□□ 0.69
TSPAN4-201ENST00000346501 TTC39AQ5SRH9 613 aa19.37■□□□□ 0.69
TSPAN4-201ENST00000346501 ZBTB40Q9NUA8 1239 aa19.37■□□□□ 0.69
TSPAN4-201ENST00000346501 PCDHAC2Q9Y5I4 1007 aa19.37■□□□□ 0.69
TSPAN4-201ENST00000346501 FPGT-TNNI3KV9GXZ4 949 aa19.37■□□□□ 0.69
TSPAN4-201ENST00000346501 RASA3Q14644 834 aa19.36■□□□□ 0.69
TSPAN4-201ENST00000346501 GRIK5Q16478 980 aa19.36■□□□□ 0.69
TSPAN4-201ENST00000346501 HOOK2Q96ED9 719 aa19.36■□□□□ 0.69
TSPAN4-201ENST00000346501 PAPPA2Q9BXP8 1791 aa19.36■□□□□ 0.69
TSPAN4-201ENST00000346501 ECM29Q5VYK3 1845 aa19.35■□□□□ 0.69
TSPAN4-201ENST00000346501 TCP10L2B9ZVM9 353 aa19.35■□□□□ 0.69
TSPAN4-201ENST00000346501 PRDX5P30044 214 aa19.35■□□□□ 0.69
TSPAN4-201ENST00000346501 PRKG1Q13976 671 aa19.35■□□□□ 0.69
TSPAN4-201ENST00000346501 ERICH6Q7L0X2 663 aa19.35■□□□□ 0.69
TSPAN4-201ENST00000346501 SPATA5Q8NB90 893 aa19.35■□□□□ 0.69
TSPAN4-201ENST00000346501 WBP1LQ9NX94 342 aa19.35■□□□□ 0.69
TSPAN4-201ENST00000346501 ANGEL1Q9UNK9 670 aaKnown RBP19.35■□□□□ 0.69
TSPAN4-201ENST00000346501 UBE2Q2LH0YL09 131 aa19.34■□□□□ 0.69
TSPAN4-201ENST00000346501 CA12O43570 354 aa19.34■□□□□ 0.69
TSPAN4-201ENST00000346501 CTCFP49711 727 aaPredicted RBP19.34■□□□□ 0.69
TSPAN4-201ENST00000346501 GSTO1P78417 241 aa19.34■□□□□ 0.69
TSPAN4-201ENST00000346501 REM2Q8IYK8 340 aaPredicted RBP19.34■□□□□ 0.69
TSPAN4-201ENST00000346501 EXOC6BQ9Y2D4 811 aa19.34■□□□□ 0.69
TSPAN4-201ENST00000346501 AOC2O75106 756 aa19.33■□□□□ 0.68
TSPAN4-201ENST00000346501 LDHCP07864 332 aa19.33■□□□□ 0.68
TSPAN4-201ENST00000346501 ARID4AP29374 1257 aaPredicted RBP19.33■□□□□ 0.68
TSPAN4-201ENST00000346501 IREB2P48200 963 aaKnown RBP19.33■□□□□ 0.68
TSPAN4-201ENST00000346501 FKBP1CQ5VVH2 108 aa19.33■□□□□ 0.68
TSPAN4-201ENST00000346501 UNCXA6NJT0 531 aa19.32■□□□□ 0.68
TSPAN4-201ENST00000346501 RAB11FIP3O75154 756 aa19.32■□□□□ 0.68
TSPAN4-201ENST00000346501 SLC10A3P09131 477 aa19.32■□□□□ 0.68
TSPAN4-201ENST00000346501 IFFO2Q5TF58 517 aa19.32■□□□□ 0.68
TSPAN4-201ENST00000346501 CLASRPQ8N2M8 674 aaKnown RBP19.32■□□□□ 0.68
TSPAN4-201ENST00000346501 KIF1BPQ96EK5 621 aa19.32■□□□□ 0.68
TSPAN4-201ENST00000346501 NOL10Q9BSC4 688 aaKnown RBP19.32■□□□□ 0.68
TSPAN4-201ENST00000346501 HMG20BQ9P0W2 317 aa19.32■□□□□ 0.68
TSPAN4-201ENST00000346501 LRP2BPQ9P2M1 347 aa19.32■□□□□ 0.68
TSPAN4-201ENST00000346501 DIXDC1Q155Q3 683 aa19.31■□□□□ 0.68
TSPAN4-201ENST00000346501 C20orf194Q5TEA3 1177 aa19.31■□□□□ 0.68
TSPAN4-201ENST00000346501 APOBEC3HQ6NTF7 200 aaKnown RBP19.31■□□□□ 0.68
TSPAN4-201ENST00000346501 MOB2Q70IA6 237 aa19.31■□□□□ 0.68
TSPAN4-201ENST00000346501 FAM83AQ86UY5 434 aa19.31■□□□□ 0.68
TSPAN4-201ENST00000346501 DBNDD2Q9BQY9 259 aa19.31■□□□□ 0.68
TSPAN4-201ENST00000346501 RAI14Q9P0K7 980 aa19.31■□□□□ 0.68
TSPAN4-201ENST00000346501 DAGLAQ9Y4D2 1042 aa19.31■□□□□ 0.68
TSPAN4-201ENST00000346501 APBB1O00213 710 aa19.3■□□□□ 0.68
TSPAN4-201ENST00000346501 NBPF12Q5TAG4 269 aaPredicted RBP19.3■□□□□ 0.68
TSPAN4-201ENST00000346501 AACSQ86V21 672 aa19.3■□□□□ 0.68
TSPAN4-201ENST00000346501 RHPN1Q8TCX5 695 aa19.3■□□□□ 0.68
TSPAN4-201ENST00000346501 SLC10A4Q96EP9 437 aa19.3■□□□□ 0.68
TSPAN4-201ENST00000346501 CCDC8Q9H0W5 538 aaPredicted RBP19.3■□□□□ 0.68
TSPAN4-201ENST00000346501 USP40Q9NVE5 1235 aa19.3■□□□□ 0.68
TSPAN4-201ENST00000346501 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.3■□□□□ 0.68
TSPAN4-201ENST00000346501 FOXN1O15353 648 aa19.29■□□□□ 0.68
TSPAN4-201ENST00000346501 IGSF3O75054 1194 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms