RNA–Protein interactions for RNA: ENST00000346330.6

UBE2A-201, Transcript of ubiquitin conjugating enzyme E2 A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2A, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2A-201ENST00000346330 CACNA1FO60840 1977 aa13.8□□□□□ -0.2
UBE2A-201ENST00000346330 TCP10L2B9ZVM9 353 aa13.8□□□□□ -0.2
UBE2A-201ENST00000346330 MYO1BO43795 1136 aa13.8□□□□□ -0.2
UBE2A-201ENST00000346330 CRKP46108 304 aa13.8□□□□□ -0.2
UBE2A-201ENST00000346330 BCAMP50895 628 aa13.8□□□□□ -0.2
UBE2A-201ENST00000346330 SLFN5Q08AF3 891 aa13.8□□□□□ -0.2
UBE2A-201ENST00000346330 METTL24Q5JXM2 366 aa13.8□□□□□ -0.2
UBE2A-201ENST00000346330 PTPN18Q99952 460 aa13.8□□□□□ -0.2
UBE2A-201ENST00000346330 CFHR5Q9BXR6 569 aa13.8□□□□□ -0.2
UBE2A-201ENST00000346330 TMEM39BQ9GZU3 492 aa13.8□□□□□ -0.2
UBE2A-201ENST00000346330 SERPINA10Q9UK55 444 aa13.8□□□□□ -0.2
UBE2A-201ENST00000346330 MROH5Q6ZUA9 1318 aa13.8□□□□□ -0.2
UBE2A-201ENST00000346330 ECM29Q5VYK3 1845 aa13.8□□□□□ -0.2
UBE2A-201ENST00000346330 PPP1R12BO60237 982 aaPredicted RBP13.79□□□□□ -0.2
UBE2A-201ENST00000346330 PDE8BO95263 885 aa13.79□□□□□ -0.2
UBE2A-201ENST00000346330 RFX5P48382 616 aaPredicted RBP13.79□□□□□ -0.2
UBE2A-201ENST00000346330 SUPT20HL1Q3ZLR7 823 aa13.79□□□□□ -0.2
UBE2A-201ENST00000346330 ELP3Q9H9T3 547 aa13.79□□□□□ -0.2
UBE2A-201ENST00000346330 E9PSI1 815 aa13.78□□□□□ -0.2
UBE2A-201ENST00000346330 FKTNO75072 461 aa13.78□□□□□ -0.2
UBE2A-201ENST00000346330 FGFR2P21802 821 aa13.78□□□□□ -0.2
UBE2A-201ENST00000346330 NOM1Q5C9Z4 860 aaKnown RBP13.78□□□□□ -0.2
UBE2A-201ENST00000346330 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.78□□□□□ -0.2
UBE2A-201ENST00000346330 PTPRCP08575 1304 aa13.78□□□□□ -0.2
UBE2A-201ENST00000346330 ARAP2Q8WZ64 1704 aa13.78□□□□□ -0.2
UBE2A-201ENST00000346330 MANSC4A6NHS7 340 aaPredicted RBP13.77□□□□□ -0.21
UBE2A-201ENST00000346330 ZBTB48P10074 688 aaPredicted RBP13.77□□□□□ -0.21
UBE2A-201ENST00000346330 MS4A4AQ96JQ5 239 aa13.77□□□□□ -0.21
UBE2A-201ENST00000346330 IREB2P48200 963 aaKnown RBP13.76□□□□□ -0.21
UBE2A-201ENST00000346330 CRHR2Q13324 411 aa13.76□□□□□ -0.21
UBE2A-201ENST00000346330 VGLL4Q14135 290 aa13.76□□□□□ -0.21
UBE2A-201ENST00000346330 APOBEC3HQ6NTF7 200 aaKnown RBP13.76□□□□□ -0.21
UBE2A-201ENST00000346330 FBXO46Q6PJ61 603 aaPredicted RBP13.76□□□□□ -0.21
UBE2A-201ENST00000346330 ATG9AQ7Z3C6 839 aa13.76□□□□□ -0.21
UBE2A-201ENST00000346330 VPS37DQ86XT2 251 aa13.76□□□□□ -0.21
UBE2A-201ENST00000346330 ANKRD13AQ8IZ07 590 aa13.76□□□□□ -0.21
UBE2A-201ENST00000346330 TRMT2AQ8IZ69 625 aaKnown RBP13.76□□□□□ -0.21
UBE2A-201ENST00000346330 OPTNQ96CV9 577 aa13.76□□□□□ -0.21
UBE2A-201ENST00000346330 PKN2Q16513 984 aaKnown RBP13.75□□□□□ -0.21
UBE2A-201ENST00000346330 OTOP1Q7RTM1 612 aa13.75□□□□□ -0.21
UBE2A-201ENST00000346330 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.75□□□□□ -0.21
UBE2A-201ENST00000346330 BRI3BPQ8WY22 251 aa13.75□□□□□ -0.21
UBE2A-201ENST00000346330 SMC4Q9NTJ3 1288 aa13.75□□□□□ -0.21
UBE2A-201ENST00000346330 ZSWIM8A7E2V4 1837 aa13.74□□□□□ -0.21
UBE2A-201ENST00000346330 TESPA1A2RU30 521 aaPredicted RBP13.74□□□□□ -0.21
UBE2A-201ENST00000346330 EYA2O00167 538 aa13.74□□□□□ -0.21
UBE2A-201ENST00000346330 FRAT2O75474 233 aaPredicted RBP13.74□□□□□ -0.21
UBE2A-201ENST00000346330 TNFAIP1Q13829 316 aa13.74□□□□□ -0.21
UBE2A-201ENST00000346330 PUM3Q15397 648 aaKnown RBP13.74□□□□□ -0.21
UBE2A-201ENST00000346330 CAVIN4Q5BKX8 364 aa13.74□□□□□ -0.21
UBE2A-201ENST00000346330 CD99L2Q8TCZ2 262 aa13.74□□□□□ -0.21
UBE2A-201ENST00000346330 SIL1Q9H173 461 aa13.74□□□□□ -0.21
UBE2A-201ENST00000346330 TRIM17Q9Y577 477 aa13.74□□□□□ -0.21
UBE2A-201ENST00000346330 UNCXA6NJT0 531 aa13.73□□□□□ -0.21
UBE2A-201ENST00000346330 ALDH1A1P00352 501 aa13.73□□□□□ -0.21
UBE2A-201ENST00000346330 INHBEP58166 350 aa13.73□□□□□ -0.21
UBE2A-201ENST00000346330 TEKT1Q969V4 418 aa13.73□□□□□ -0.21
UBE2A-201ENST00000346330 ZDHHC15Q96MV8 337 aa13.73□□□□□ -0.21
UBE2A-201ENST00000346330 NOB1Q9ULX3 412 aaKnown RBP13.73□□□□□ -0.21
UBE2A-201ENST00000346330 PA2G4Q9UQ80 394 aaKnown RBP13.73□□□□□ -0.21
UBE2A-201ENST00000346330 SNCAIPQ9Y6H5 919 aa13.73□□□□□ -0.21
UBE2A-201ENST00000346330 PRDX5P30044 214 aa13.72□□□□□ -0.21
UBE2A-201ENST00000346330 HDLBPQ00341 1268 aaKnown RBP13.72□□□□□ -0.21
UBE2A-201ENST00000346330 DIXDC1Q155Q3 683 aa13.72□□□□□ -0.21
UBE2A-201ENST00000346330 ALDH1L2Q3SY69 923 aa13.72□□□□□ -0.21
UBE2A-201ENST00000346330 FAM43AQ8N2R8 423 aa13.72□□□□□ -0.21
UBE2A-201ENST00000346330 TBC1D22AQ8WUA7 517 aa13.72□□□□□ -0.21
UBE2A-201ENST00000346330 ZKSCAN4Q969J2 545 aaPredicted RBP13.72□□□□□ -0.21
UBE2A-201ENST00000346330 OTUD5Q96G74 571 aa13.72□□□□□ -0.21
UBE2A-201ENST00000346330 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.72□□□□□ -0.21
UBE2A-201ENST00000346330 POTEFA5A3E0 1075 aa13.71□□□□□ -0.21
UBE2A-201ENST00000346330 IFIT1P09914 478 aaKnown RBP13.71□□□□□ -0.21
UBE2A-201ENST00000346330 ADORA1P30542 326 aa13.71□□□□□ -0.21
UBE2A-201ENST00000346330 MAP3K9P80192 1104 aa13.71□□□□□ -0.21
UBE2A-201ENST00000346330 NFIAQ12857 509 aa13.71□□□□□ -0.21
UBE2A-201ENST00000346330 MEIS3Q99687 375 aa13.71□□□□□ -0.21
UBE2A-201ENST00000346330 TNNQ9UQP3 1299 aa13.71□□□□□ -0.21
UBE2A-201ENST00000346330 LRRFIP2Q9Y608 721 aaKnown RBP13.71□□□□□ -0.21
UBE2A-201ENST00000346330 KIF16BQ96L93 1317 aa13.7□□□□□ -0.22
UBE2A-201ENST00000346330 CCL15-CCL14A0A0B4J2E2 113 aa13.7□□□□□ -0.22
UBE2A-201ENST00000346330 INPP5BP32019 993 aa13.7□□□□□ -0.22
UBE2A-201ENST00000346330 PHKA1P46020 1223 aa13.7□□□□□ -0.22
UBE2A-201ENST00000346330 TNNI2P48788 182 aa13.7□□□□□ -0.22
UBE2A-201ENST00000346330 CCL15Q16663 113 aa13.7□□□□□ -0.22
UBE2A-201ENST00000346330 MIGA2Q7L4E1 593 aa13.7□□□□□ -0.22
UBE2A-201ENST00000346330 LPIN2Q92539 896 aa13.7□□□□□ -0.22
UBE2A-201ENST00000346330 WRNIP1Q96S55 665 aa13.7□□□□□ -0.22
UBE2A-201ENST00000346330 DAGLAQ9Y4D2 1042 aa13.7□□□□□ -0.22
UBE2A-201ENST00000346330 RBBP6Q7Z6E9 1792 aaKnown RBP13.69□□□□□ -0.22
UBE2A-201ENST00000346330 SPDYE5A6NIY4 337 aa13.69□□□□□ -0.22
UBE2A-201ENST00000346330 UBTFL1P0CB47 393 aaPredicted RBP13.69□□□□□ -0.22
UBE2A-201ENST00000346330 SLURP2P0DP57 97 aa13.69□□□□□ -0.22
UBE2A-201ENST00000346330 SLC5A1P13866 664 aa13.69□□□□□ -0.22
UBE2A-201ENST00000346330 ATP2B3Q16720 1220 aa13.69□□□□□ -0.22
UBE2A-201ENST00000346330 CDC42EP5Q6NZY7 148 aa13.69□□□□□ -0.22
UBE2A-201ENST00000346330 FAM83AQ86UY5 434 aa13.69□□□□□ -0.22
UBE2A-201ENST00000346330 ZFPM1Q8IX07 1006 aa13.69□□□□□ -0.22
UBE2A-201ENST00000346330 MRIQ9BWK5 157 aa13.69□□□□□ -0.22
UBE2A-201ENST00000346330 PTPN22Q9Y2R2 807 aa13.69□□□□□ -0.22
UBE2A-201ENST00000346330 BTBD19C9JJ37 291 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms