RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 FAM169AQ9Y6X4 670 aa21.71■■□□□ 1.07
HDAC4-201ENST00000345617 MYL5Q02045 173 aa21.71■■□□□ 1.07
HDAC4-201ENST00000345617 IQUBQ8NA54 791 aa21.71■■□□□ 1.07
HDAC4-201ENST00000345617 TRIM35Q9UPQ4 493 aa21.71■■□□□ 1.07
HDAC4-201ENST00000345617 MRVI1Q9Y6F6 885 aa21.71■■□□□ 1.07
HDAC4-201ENST00000345617 LGSNQ5TDP6 509 aa21.71■■□□□ 1.07
HDAC4-201ENST00000345617 AP1ARQ63HQ0 302 aa21.71■■□□□ 1.07
HDAC4-201ENST00000345617 CCT6BQ92526 530 aa21.71■■□□□ 1.07
HDAC4-201ENST00000345617 CRCPO75575 148 aa21.7■■□□□ 1.06
HDAC4-201ENST00000345617 DENND2CQ68D51 928 aa21.7■■□□□ 1.06
HDAC4-201ENST00000345617 FAM160A1Q05DH4 1040 aa21.7■■□□□ 1.06
HDAC4-201ENST00000345617 AFMP43652 599 aa21.7■■□□□ 1.06
HDAC4-201ENST00000345617 CCDC25Q86WR0 208 aa21.7■■□□□ 1.06
HDAC4-201ENST00000345617 ARHGEF2Q92974 986 aaKnown RBP21.7■■□□□ 1.06
HDAC4-201ENST00000345617 C6orf50Q9HD87 102 aa21.7■■□□□ 1.06
HDAC4-201ENST00000345617 ZNF830Q96NB3 372 aaPredicted RBP21.7■■□□□ 1.06
HDAC4-201ENST00000345617 TEX13AQ9BXU3 409 aaPredicted RBP21.7■■□□□ 1.06
HDAC4-201ENST00000345617 ANKRD36BQ8N2N9 1353 aa21.7■■□□□ 1.06
HDAC4-201ENST00000345617 KLHL34Q8N239 644 aa21.7■■□□□ 1.06
HDAC4-201ENST00000345617 RGS22Q8NE09 1264 aa21.7■■□□□ 1.06
HDAC4-201ENST00000345617 B4DLN1 442 aa21.69■■□□□ 1.06
HDAC4-201ENST00000345617 ERCC5P28715 1186 aaPredicted RBP21.69■■□□□ 1.06
HDAC4-201ENST00000345617 GNA11P29992 359 aa21.69■■□□□ 1.06
HDAC4-201ENST00000345617 KRT2P35908 639 aa21.69■■□□□ 1.06
HDAC4-201ENST00000345617 MRPL12P52815 198 aaKnown RBP21.69■■□□□ 1.06
HDAC4-201ENST00000345617 TACC3Q9Y6A5 838 aa21.69■■□□□ 1.06
HDAC4-201ENST00000345617 CCDC61Q9Y6R9 512 aa21.69■■□□□ 1.06
HDAC4-201ENST00000345617 UQCRFS1P1P0C7P4 283 aa21.69■■□□□ 1.06
HDAC4-201ENST00000345617 HSPA1LP34931 641 aa21.69■■□□□ 1.06
HDAC4-201ENST00000345617 BRD3Q15059 726 aa21.69■■□□□ 1.06
HDAC4-201ENST00000345617 IFNKQ9P0W0 207 aa21.68■■□□□ 1.06
HDAC4-201ENST00000345617 SYT10Q6XYQ8 523 aa21.68■■□□□ 1.06
HDAC4-201ENST00000345617 NUCKS1Q9H1E3 243 aaKnown RBP21.68■■□□□ 1.06
HDAC4-201ENST00000345617 MUM1Q2TAK8 710 aa21.68■■□□□ 1.06
HDAC4-201ENST00000345617 CFAP221Q4G0U5 840 aa21.68■■□□□ 1.06
HDAC4-201ENST00000345617 TMEM87AQ8NBN3 555 aa21.68■■□□□ 1.06
HDAC4-201ENST00000345617 TMOD3Q9NYL9 352 aa21.68■■□□□ 1.06
HDAC4-201ENST00000345617 KIF1BO60333 1816 aa21.68■■□□□ 1.06
HDAC4-201ENST00000345617 EVI5O60447 810 aa21.68■■□□□ 1.06
HDAC4-201ENST00000345617 GOLGA8QA0A0J9YX86 632 aa21.68■■□□□ 1.06
HDAC4-201ENST00000345617 GOLGA8OA6NCC3 632 aa21.68■■□□□ 1.06
HDAC4-201ENST00000345617 GOLGA8NF8WBI6 632 aa21.68■■□□□ 1.06
HDAC4-201ENST00000345617 NCBP1Q09161 790 aaKnown RBP21.68■■□□□ 1.06
HDAC4-201ENST00000345617 MCMDC2Q4G0Z9 681 aa21.68■■□□□ 1.06
HDAC4-201ENST00000345617 PRPF31Q8WWY3 499 aaKnown RBP21.68■■□□□ 1.06
HDAC4-201ENST00000345617 CABS1Q96KC9 395 aa21.68■■□□□ 1.06
HDAC4-201ENST00000345617 RAB17Q9H0T7 212 aa21.68■■□□□ 1.06
HDAC4-201ENST00000345617 GOLGA4Q13439 2230 aaKnown RBP21.67■■□□□ 1.06
HDAC4-201ENST00000345617 ARHGAP6O43182 974 aa21.67■■□□□ 1.06
HDAC4-201ENST00000345617 PPM1FP49593 454 aaPredicted RBP21.67■■□□□ 1.06
HDAC4-201ENST00000345617 PRR16Q569H4 304 aa21.67■■□□□ 1.06
HDAC4-201ENST00000345617 PSMD1Q99460 953 aa21.67■■□□□ 1.06
HDAC4-201ENST00000345617 NAP1L4Q99733 375 aaKnown RBP21.67■■□□□ 1.06
HDAC4-201ENST00000345617 ESYT1Q9BSJ8 1104 aa21.67■■□□□ 1.06
HDAC4-201ENST00000345617 GIPC1O14908 333 aa21.67■■□□□ 1.06
HDAC4-201ENST00000345617 DNM1Q05193 864 aaKnown RBP21.67■■□□□ 1.06
HDAC4-201ENST00000345617 CNNM4Q6P4Q7 775 aa21.67■■□□□ 1.06
HDAC4-201ENST00000345617 ITIH3Q06033 890 aa21.67■■□□□ 1.06
HDAC4-201ENST00000345617 C20orf194Q5TEA3 1177 aa21.67■■□□□ 1.06
HDAC4-201ENST00000345617 MIER3Q7Z3K6 550 aa21.67■■□□□ 1.06
HDAC4-201ENST00000345617 ZMAT2Q96NC0 199 aaKnown RBP21.67■■□□□ 1.06
HDAC4-201ENST00000345617 RBM26Q5T8P6 1007 aaKnown RBP21.66■■□□□ 1.06
HDAC4-201ENST00000345617 ISM2Q6H9L7 571 aa21.66■■□□□ 1.06
HDAC4-201ENST00000345617 MMRN2Q9H8L6 949 aa21.66■■□□□ 1.06
HDAC4-201ENST00000345617 FCHSD1Q86WN1 690 aa21.66■■□□□ 1.06
HDAC4-201ENST00000345617 PANK2Q9BZ23 570 aa21.66■■□□□ 1.06
HDAC4-201ENST00000345617 HIP1RO75146 1068 aa21.66■■□□□ 1.06
HDAC4-201ENST00000345617 RRS1Q15050 365 aaKnown RBP21.66■■□□□ 1.06
HDAC4-201ENST00000345617 TTC36A6NLP5 189 aa21.66■■□□□ 1.06
HDAC4-201ENST00000345617 SDSP20132 328 aa21.66■■□□□ 1.06
HDAC4-201ENST00000345617 KLF18A0A0U1RQI7 1052 aa21.65■■□□□ 1.06
HDAC4-201ENST00000345617 P3H4Q92791 437 aa21.65■■□□□ 1.06
HDAC4-201ENST00000345617 TSPY3P0CV98 308 aa21.65■■□□□ 1.06
HDAC4-201ENST00000345617 TSPY8P0CW00 308 aa21.65■■□□□ 1.06
HDAC4-201ENST00000345617 GCKP35557 465 aa21.65■■□□□ 1.06
HDAC4-201ENST00000345617 SYNRGQ9UMZ2 1314 aa21.65■■□□□ 1.06
HDAC4-201ENST00000345617 SATB1Q01826 763 aa21.65■■□□□ 1.06
HDAC4-201ENST00000345617 LLPHQ9BRT6 129 aaKnown RBP21.65■■□□□ 1.06
HDAC4-201ENST00000345617 EIF2AQ9BY44 585 aaKnown RBP21.65■■□□□ 1.06
HDAC4-201ENST00000345617 SPATS2LQ9NUQ6 558 aaKnown RBP21.65■■□□□ 1.06
HDAC4-201ENST00000345617 ZNF131P52739 623 aa21.65■■□□□ 1.06
HDAC4-201ENST00000345617 TMTC1Q8IUR5 882 aa21.65■■□□□ 1.06
HDAC4-201ENST00000345617 RAD54L2Q9Y4B4 1467 aa21.65■■□□□ 1.06
HDAC4-201ENST00000345617 FAM13AO94988 1023 aa21.64■■□□□ 1.06
HDAC4-201ENST00000345617 RLBP1P12271 317 aa21.64■■□□□ 1.06
HDAC4-201ENST00000345617 RPGRQ92834 1020 aaKnown RBP21.64■■□□□ 1.06
HDAC4-201ENST00000345617 PRDM11Q9NQV5 511 aa21.64■■□□□ 1.06
HDAC4-201ENST00000345617 GEN1Q17RS7 908 aa21.64■■□□□ 1.06
HDAC4-201ENST00000345617 EPB41P11171 864 aaKnown RBP21.64■■□□□ 1.05
HDAC4-201ENST00000345617 TRIM4Q9C037 500 aa21.64■■□□□ 1.05
HDAC4-201ENST00000345617 SPDYE3A6NKU9 549 aa21.64■■□□□ 1.05
HDAC4-201ENST00000345617 GOLGA5Q8TBA6 731 aa21.64■■□□□ 1.05
HDAC4-201ENST00000345617 VSIG1Q86XK7 387 aa21.63■■□□□ 1.05
HDAC4-201ENST00000345617 MCM10Q7L590 875 aa21.63■■□□□ 1.05
HDAC4-201ENST00000345617 TXNDC2Q86VQ3 553 aa21.63■■□□□ 1.05
HDAC4-201ENST00000345617 DDX27Q96GQ7 796 aaKnown RBP21.63■■□□□ 1.05
HDAC4-201ENST00000345617 PLCD1P51178 756 aa21.63■■□□□ 1.05
HDAC4-201ENST00000345617 DRC3Q9H069 523 aa21.63■■□□□ 1.05
HDAC4-201ENST00000345617 E7EVH7 732 aa21.63■■□□□ 1.05
HDAC4-201ENST00000345617 IGSF22Q8N9C0 903 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms