RNA–Protein interactions for RNA: ENST00000345436.8

CKLF-202, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-202ENST00000345436 SPDYE2Q495Y8 402 aa22.12■■□□□ 1.13
CKLF-202ENST00000345436 LDLRAD1Q5T700 205 aa22.12■■□□□ 1.13
CKLF-202ENST00000345436 FRAT1Q92837 279 aaPredicted RBP22.12■■□□□ 1.13
CKLF-202ENST00000345436 SIL1Q9H173 461 aa22.12■■□□□ 1.13
CKLF-202ENST00000345436 ZNF70Q9UC06 446 aaPredicted RBP22.12■■□□□ 1.13
CKLF-202ENST00000345436 HNRNPUQ00839 825 aaKnown RBP eCLIP22.11■■□□□ 1.13
CKLF-202ENST00000345436 MAP3K11Q16584 847 aa22.11■■□□□ 1.13
CKLF-202ENST00000345436 ATP2B3Q16720 1220 aa22.11■■□□□ 1.13
CKLF-202ENST00000345436 ATF7IPQ6VMQ6 1270 aa22.11■■□□□ 1.13
CKLF-202ENST00000345436 TDRD3Q9H7E2 651 aaKnown RBP22.11■■□□□ 1.13
CKLF-202ENST00000345436 TM4SF4P48230 202 aa22.1■■□□□ 1.13
CKLF-202ENST00000345436 ATG9AQ7Z3C6 839 aa22.1■■□□□ 1.13
CKLF-202ENST00000345436 MIER1Q8N108 512 aa22.1■■□□□ 1.13
CKLF-202ENST00000345436 HOOK2Q96ED9 719 aa22.1■■□□□ 1.13
CKLF-202ENST00000345436 COPRSQ9NQ92 184 aa22.1■■□□□ 1.13
CKLF-202ENST00000345436 A0A1B0GUL6 1792 aa22.1■■□□□ 1.13
CKLF-202ENST00000345436 ALDH1A1P00352 501 aa22.09■■□□□ 1.13
CKLF-202ENST00000345436 DGKZQ13574 1117 aa22.09■■□□□ 1.13
CKLF-202ENST00000345436 MEIS3Q99687 375 aa22.09■■□□□ 1.13
CKLF-202ENST00000345436 AKAP2Q9Y2D5 859 aa22.09■■□□□ 1.13
CKLF-202ENST00000345436 PCDHAC2Q9Y5I4 1007 aa22.09■■□□□ 1.13
CKLF-202ENST00000345436 ZNF646O15015 1829 aaPredicted RBP22.08■■□□□ 1.13
CKLF-202ENST00000345436 MANSC4A6NHS7 340 aaPredicted RBP22.08■■□□□ 1.13
CKLF-202ENST00000345436 SEMA3EO15041 775 aa22.08■■□□□ 1.13
CKLF-202ENST00000345436 ANKRD13AQ8IZ07 590 aa22.08■■□□□ 1.13
CKLF-202ENST00000345436 SRGAP3O43295 1099 aa22.07■■□□□ 1.12
CKLF-202ENST00000345436 GNAI2P04899 355 aa22.07■■□□□ 1.12
CKLF-202ENST00000345436 ZBTB48P10074 688 aaPredicted RBP22.07■■□□□ 1.12
CKLF-202ENST00000345436 NBPF12Q5TAG4 269 aaPredicted RBP22.07■■□□□ 1.12
CKLF-202ENST00000345436 SPRYD7Q5W111 196 aa22.07■■□□□ 1.12
CKLF-202ENST00000345436 ZKSCAN2Q63HK3 967 aa22.07■■□□□ 1.12
CKLF-202ENST00000345436 HHIPL2Q6UWX4 724 aa22.07■■□□□ 1.12
CKLF-202ENST00000345436 ZDHHC15Q96MV8 337 aa22.07■■□□□ 1.12
CKLF-202ENST00000345436 DENND2AQ9ULE3 1009 aa22.07■■□□□ 1.12
CKLF-202ENST00000345436 CCDC85CA6NKD9 419 aa22.06■■□□□ 1.12
CKLF-202ENST00000345436 TCP10L2B9ZVM9 353 aa22.06■■□□□ 1.12
CKLF-202ENST00000345436 MKRN3Q13064 507 aaKnown RBP22.06■■□□□ 1.12
CKLF-202ENST00000345436 OTUD7BQ6GQQ9 843 aa22.06■■□□□ 1.12
CKLF-202ENST00000345436 ZGPATQ8N5A5 531 aaKnown RBP22.06■■□□□ 1.12
CKLF-202ENST00000345436 MCOLN1Q9GZU1 580 aa22.06■■□□□ 1.12
CKLF-202ENST00000345436 BCAR3O75815 825 aa22.05■■□□□ 1.12
CKLF-202ENST00000345436 TRIM27P14373 513 aa22.05■■□□□ 1.12
CKLF-202ENST00000345436 FKBP1CQ5VVH2 108 aa22.05■■□□□ 1.12
CKLF-202ENST00000345436 USP2O75604 605 aaPredicted RBP22.04■■□□□ 1.12
CKLF-202ENST00000345436 MTX1Q13505 466 aa22.04■■□□□ 1.12
CKLF-202ENST00000345436 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.04■■□□□ 1.12
CKLF-202ENST00000345436 LDHBP07195 334 aaKnown RBP22.03■■□□□ 1.12
CKLF-202ENST00000345436 NOM1Q5C9Z4 860 aaKnown RBP22.03■■□□□ 1.12
CKLF-202ENST00000345436 FAM83AQ86UY5 434 aa22.03■■□□□ 1.12
CKLF-202ENST00000345436 SLF2Q8IX21 1173 aa22.03■■□□□ 1.12
CKLF-202ENST00000345436 PA2G4Q9UQ80 394 aaKnown RBP22.03■■□□□ 1.12
CKLF-202ENST00000345436 AKAP11Q9UKA4 1901 aa22.02■■□□□ 1.12
CKLF-202ENST00000345436 ZBTB22O15209 634 aa22.02■■□□□ 1.12
CKLF-202ENST00000345436 G3BP1Q13283 466 aaKnown RBP eCLIP22.02■■□□□ 1.12
CKLF-202ENST00000345436 PKN2Q16513 984 aaKnown RBP22.02■■□□□ 1.12
CKLF-202ENST00000345436 CTU1Q7Z7A3 348 aaKnown RBP22.02■■□□□ 1.12
CKLF-202ENST00000345436 FTSJ3Q8IY81 847 aaKnown RBP22.02■■□□□ 1.12
CKLF-202ENST00000345436 CLUAP1Q96AJ1 413 aa22.02■■□□□ 1.12
CKLF-202ENST00000345436 WNK4Q96J92 1243 aa22.02■■□□□ 1.12
CKLF-202ENST00000345436 CSADQ9Y600 493 aa22.02■■□□□ 1.12
CKLF-202ENST00000345436 TBC1D8O95759 1140 aa22.01■■□□□ 1.11
CKLF-202ENST00000345436 MVPQ14764 893 aaKnown RBP22.01■■□□□ 1.11
CKLF-202ENST00000345436 GRIK5Q16478 980 aa22.01■■□□□ 1.11
CKLF-202ENST00000345436 SPTY2D1Q68D10 685 aaPredicted RBP22.01■■□□□ 1.11
CKLF-202ENST00000345436 TMEM39BQ9GZU3 492 aa22.01■■□□□ 1.11
CKLF-202ENST00000345436 MAP3K9P80192 1104 aa22■■□□□ 1.11
CKLF-202ENST00000345436 GORABQ5T7V8 394 aa22■■□□□ 1.11
CKLF-202ENST00000345436 DCAF15Q66K64 600 aa22■■□□□ 1.11
CKLF-202ENST00000345436 APOBEC3HQ6NTF7 200 aaKnown RBP22■■□□□ 1.11
CKLF-202ENST00000345436 CFHR5Q9BXR6 569 aa22■■□□□ 1.11
CKLF-202ENST00000345436 FZD1Q9UP38 647 aa22■■□□□ 1.11
CKLF-202ENST00000345436 AOX1Q06278 1338 aa22■■□□□ 1.11
CKLF-202ENST00000345436 SALL1Q9NSC2 1324 aa22■■□□□ 1.11
CKLF-202ENST00000345436 ECM29Q5VYK3 1845 aa21.99■■□□□ 1.11
CKLF-202ENST00000345436 CCDC102BQ68D86 513 aa21.99■■□□□ 1.11
CKLF-202ENST00000345436 CLMNQ96JQ2 1002 aa21.99■■□□□ 1.11
CKLF-202ENST00000345436 TEPSINQ96N21 525 aa21.99■■□□□ 1.11
CKLF-202ENST00000345436 CASP8AP2Q9UKL3 1982 aa21.99■■□□□ 1.11
CKLF-202ENST00000345436 GPR25O00155 361 aa21.98■■□□□ 1.11
CKLF-202ENST00000345436 WDHD1O75717 1129 aaPredicted RBP21.98■■□□□ 1.11
CKLF-202ENST00000345436 PHKA1P46020 1223 aa21.98■■□□□ 1.11
CKLF-202ENST00000345436 TIMM10P62072 90 aa21.98■■□□□ 1.11
CKLF-202ENST00000345436 IFNL1Q8IU54 200 aa21.98■■□□□ 1.11
CKLF-202ENST00000345436 NEUROD6Q96NK8 337 aa21.98■■□□□ 1.11
CKLF-202ENST00000345436 A0A1B0GUL7 405 aa21.97■■□□□ 1.11
CKLF-202ENST00000345436 TFCP2Q12800 502 aa21.97■■□□□ 1.11
CKLF-202ENST00000345436 FKTNO75072 461 aa21.96■■□□□ 1.11
CKLF-202ENST00000345436 MS4A1P11836 297 aa21.96■■□□□ 1.11
CKLF-202ENST00000345436 CACNB3P54284 484 aa21.96■■□□□ 1.11
CKLF-202ENST00000345436 DZIP1Q86YF9 867 aaKnown RBP21.96■■□□□ 1.11
CKLF-202ENST00000345436 TMEM57Q8N5G2 664 aa21.96■■□□□ 1.11
CKLF-202ENST00000345436 ZNF296Q8WUU4 475 aaPredicted RBP21.96■■□□□ 1.11
CKLF-202ENST00000345436 FAM151AQ8WW52 585 aa21.96■■□□□ 1.11
CKLF-202ENST00000345436 OPTNQ96CV9 577 aa21.96■■□□□ 1.11
CKLF-202ENST00000345436 XAGE2Q96GT9 111 aa21.96■■□□□ 1.11
CKLF-202ENST00000345436 ELP3Q9H9T3 547 aa21.96■■□□□ 1.11
CKLF-202ENST00000345436 PDS5AQ29RF7 1337 aaKnown RBP21.96■■□□□ 1.11
CKLF-202ENST00000345436 ZBED9Q6R2W3 1325 aa21.96■■□□□ 1.11
CKLF-202ENST00000345436 SSC5DA1L4H1 1573 aa21.95■■□□□ 1.11
CKLF-202ENST00000345436 GTF2A2P52657 109 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms