RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 DDX41Q9UJV9 622 aaKnown RBP13.61□□□□□ -0.23
COL12A1-202ENST00000345356 PSDA5PKW4 1024 aaPredicted RBP13.61□□□□□ -0.23
COL12A1-202ENST00000345356 KIF3CO14782 793 aa13.61□□□□□ -0.23
COL12A1-202ENST00000345356 NBPF7P0C2Y1 421 aaPredicted RBP13.61□□□□□ -0.23
COL12A1-202ENST00000345356 LONRF2Q1L5Z9 754 aa13.61□□□□□ -0.23
COL12A1-202ENST00000345356 ESCO1Q5FWF5 840 aa13.61□□□□□ -0.23
COL12A1-202ENST00000345356 TRIM68Q6AZZ1 485 aa13.61□□□□□ -0.23
COL12A1-202ENST00000345356 VSIG1Q86XK7 387 aa13.61□□□□□ -0.23
COL12A1-202ENST00000345356 KCNH3Q9ULD8 1083 aa13.61□□□□□ -0.23
COL12A1-202ENST00000345356 BICDL2A1A5D9 508 aa13.61□□□□□ -0.23
COL12A1-202ENST00000345356 ANXA1P04083 346 aa13.61□□□□□ -0.23
COL12A1-202ENST00000345356 TBC1D5Q92609 795 aa13.61□□□□□ -0.23
COL12A1-202ENST00000345356 FAN1Q9Y2M0 1017 aa13.61□□□□□ -0.23
COL12A1-202ENST00000345356 SOS1Q07889 1333 aaPredicted RBP13.61□□□□□ -0.23
COL12A1-202ENST00000345356 RPSAP08865 295 aaKnown RBP13.61□□□□□ -0.23
COL12A1-202ENST00000345356 IRX5P78411 483 aaPredicted RBP13.61□□□□□ -0.23
COL12A1-202ENST00000345356 IFIT5Q13325 482 aaKnown RBP13.61□□□□□ -0.23
COL12A1-202ENST00000345356 MCTP2Q6DN12 878 aa13.61□□□□□ -0.23
COL12A1-202ENST00000345356 PSMB7Q99436 277 aa13.61□□□□□ -0.23
COL12A1-202ENST00000345356 PLEKHA4Q9H4M7 779 aa13.61□□□□□ -0.23
COL12A1-202ENST00000345356 ODF2LQ9ULJ1 636 aa13.61□□□□□ -0.23
COL12A1-202ENST00000345356 PA2G4Q9UQ80 394 aaKnown RBP13.61□□□□□ -0.23
COL12A1-202ENST00000345356 RNF10Q8N5U6 811 aaKnown RBP13.61□□□□□ -0.23
COL12A1-202ENST00000345356 USHBP1Q8N6Y0 703 aa13.61□□□□□ -0.23
COL12A1-202ENST00000345356 PAF1Q8N7H5 531 aa13.61□□□□□ -0.23
COL12A1-202ENST00000345356 SLC52A1Q9NWF4 448 aa13.61□□□□□ -0.23
COL12A1-202ENST00000345356 STK38LQ9Y2H1 464 aa13.61□□□□□ -0.23
COL12A1-202ENST00000345356 RNF168Q8IYW5 571 aaPredicted RBP13.6□□□□□ -0.23
COL12A1-202ENST00000345356 BLMP54132 1417 aaPredicted RBP13.6□□□□□ -0.23
COL12A1-202ENST00000345356 CIB2O75838 187 aa13.6□□□□□ -0.23
COL12A1-202ENST00000345356 FBLN1P23142 703 aa13.6□□□□□ -0.23
COL12A1-202ENST00000345356 MSH6P52701 1360 aa13.6□□□□□ -0.23
COL12A1-202ENST00000345356 CD2BP2O95400 341 aaKnown RBP13.6□□□□□ -0.23
COL12A1-202ENST00000345356 KRT9P35527 623 aa13.6□□□□□ -0.23
COL12A1-202ENST00000345356 CACTINQ8WUQ7 758 aaKnown RBP13.6□□□□□ -0.23
COL12A1-202ENST00000345356 SYNRGQ9UMZ2 1314 aa13.6□□□□□ -0.23
COL12A1-202ENST00000345356 TMEM110-MUSTN1A8MSY1 372 aa13.6□□□□□ -0.23
COL12A1-202ENST00000345356 SLC27A2O14975 620 aa13.6□□□□□ -0.23
COL12A1-202ENST00000345356 IGHMBP2P38935 993 aaKnown RBP13.6□□□□□ -0.23
COL12A1-202ENST00000345356 TTC19Q6DKK2 380 aaPredicted RBP13.6□□□□□ -0.23
COL12A1-202ENST00000345356 CCDC170Q8IYT3 715 aa13.6□□□□□ -0.23
COL12A1-202ENST00000345356 MLKLQ8NB16 471 aa13.6□□□□□ -0.23
COL12A1-202ENST00000345356 ARHGEF2Q92974 986 aaKnown RBP13.6□□□□□ -0.23
COL12A1-202ENST00000345356 TBC1D31Q96DN5 1066 aa13.6□□□□□ -0.23
COL12A1-202ENST00000345356 RPGRIP1Q96KN7 1286 aa13.6□□□□□ -0.23
COL12A1-202ENST00000345356 TESK2Q96S53 571 aa13.6□□□□□ -0.23
COL12A1-202ENST00000345356 SAR1BQ9Y6B6 198 aa13.6□□□□□ -0.23
COL12A1-202ENST00000345356 MRVI1Q9Y6F6 885 aa13.6□□□□□ -0.23
COL12A1-202ENST00000345356 CALCOCO2Q13137 446 aa13.59□□□□□ -0.23
COL12A1-202ENST00000345356 TTF1Q15361 905 aaPredicted RBP13.59□□□□□ -0.23
COL12A1-202ENST00000345356 UBE3BQ7Z3V4 1068 aa13.59□□□□□ -0.23
COL12A1-202ENST00000345356 WAPLQ7Z5K2 1190 aa13.59□□□□□ -0.23
COL12A1-202ENST00000345356 SGSM2O43147 1006 aa13.59□□□□□ -0.23
COL12A1-202ENST00000345356 ZBTB22O15209 634 aa13.59□□□□□ -0.23
COL12A1-202ENST00000345356 NOL3O60936 208 aaKnown RBP13.59□□□□□ -0.23
COL12A1-202ENST00000345356 RAD51AP2Q09MP3 1159 aa13.59□□□□□ -0.23
COL12A1-202ENST00000345356 MPRIPQ6WCQ1 1025 aa13.59□□□□□ -0.23
COL12A1-202ENST00000345356 GBP5Q96PP8 586 aa13.59□□□□□ -0.23
COL12A1-202ENST00000345356 PNMA6AP0CW24 399 aaPredicted RBP13.59□□□□□ -0.23
COL12A1-202ENST00000345356 GSPT1P15170 499 aaKnown RBP13.59□□□□□ -0.23
COL12A1-202ENST00000345356 ATP5DP30049 168 aa13.59□□□□□ -0.23
COL12A1-202ENST00000345356 TBC1D8BQ0IIM8 1120 aa13.59□□□□□ -0.23
COL12A1-202ENST00000345356 IQUBQ8NA54 791 aa13.59□□□□□ -0.23
COL12A1-202ENST00000345356 WWC2Q6AWC2 1192 aa13.59□□□□□ -0.23
COL12A1-202ENST00000345356 JARID2Q92833 1246 aaPredicted RBP13.59□□□□□ -0.23
COL12A1-202ENST00000345356 MAGEA9P43362 315 aa13.58□□□□□ -0.23
COL12A1-202ENST00000345356 ZNF287Q9HBT7 754 aa13.58□□□□□ -0.23
COL12A1-202ENST00000345356 E2F5Q15329 346 aa13.58□□□□□ -0.24
COL12A1-202ENST00000345356 RGS22Q8NE09 1264 aa13.58□□□□□ -0.24
COL12A1-202ENST00000345356 N4BP2L2Q92802 583 aaPredicted RBP13.58□□□□□ -0.24
COL12A1-202ENST00000345356 LLPHQ9BRT6 129 aaKnown RBP13.58□□□□□ -0.24
COL12A1-202ENST00000345356 BICC1Q9H694 974 aaKnown RBP13.58□□□□□ -0.24
COL12A1-202ENST00000345356 CWC25Q9NXE8 425 aaPredicted RBP13.58□□□□□ -0.24
COL12A1-202ENST00000345356 TPX2Q9ULW0 747 aaKnown RBP13.58□□□□□ -0.24
COL12A1-202ENST00000345356 ATP2A1O14983 1001 aa13.58□□□□□ -0.24
COL12A1-202ENST00000345356 CDC25BP30305 580 aa13.58□□□□□ -0.24
COL12A1-202ENST00000345356 APBB1IPQ7Z5R6 666 aaPredicted RBP13.58□□□□□ -0.24
COL12A1-202ENST00000345356 CFAP57Q96MR6 1250 aa13.58□□□□□ -0.24
COL12A1-202ENST00000345356 KRT24Q2M2I5 525 aa13.58□□□□□ -0.24
COL12A1-202ENST00000345356 GSTA5Q7RTV2 222 aa13.58□□□□□ -0.24
COL12A1-202ENST00000345356 KLHL7Q8IXQ5 586 aa13.58□□□□□ -0.24
COL12A1-202ENST00000345356 TDRD7Q8NHU6 1098 aaKnown RBP13.58□□□□□ -0.24
COL12A1-202ENST00000345356 KRT23Q9C075 422 aa13.58□□□□□ -0.24
COL12A1-202ENST00000345356 SPTLC3Q9NUV7 552 aa13.58□□□□□ -0.24
COL12A1-202ENST00000345356 CLTAP09496 248 aa13.57□□□□□ -0.24
COL12A1-202ENST00000345356 PRAG1Q86YV5 1406 aa13.57□□□□□ -0.24
COL12A1-202ENST00000345356 ZNF131P52739 623 aa13.57□□□□□ -0.24
COL12A1-202ENST00000345356 KRT71Q3SY84 523 aa13.57□□□□□ -0.24
COL12A1-202ENST00000345356 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.57□□□□□ -0.24
COL12A1-202ENST00000345356 NOX5Q96PH1 765 aa13.57□□□□□ -0.24
COL12A1-202ENST00000345356 TRIM31Q9BZY9 425 aa13.57□□□□□ -0.24
COL12A1-202ENST00000345356 UTP11Q9Y3A2 253 aaKnown RBP13.57□□□□□ -0.24
COL12A1-202ENST00000345356 SAMM50Q9Y512 469 aa13.57□□□□□ -0.24
COL12A1-202ENST00000345356 HIP1RO75146 1068 aa13.57□□□□□ -0.24
COL12A1-202ENST00000345356 RNF40O75150 1001 aa13.57□□□□□ -0.24
COL12A1-202ENST00000345356 RXRAP19793 462 aa13.57□□□□□ -0.24
COL12A1-202ENST00000345356 MMS22LQ6ZRQ5 1243 aa13.57□□□□□ -0.24
COL12A1-202ENST00000345356 TRMT44Q8IYL2 757 aaKnown RBP13.57□□□□□ -0.24
COL12A1-202ENST00000345356 MCUR1Q96AQ8 359 aa13.57□□□□□ -0.24
COL12A1-202ENST00000345356 MTMR6Q9Y217 621 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms