RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 ADAMTSL1Q8N6G6 1762 aa25.42■■□□□ 1.66
SMARCB1-202ENST00000344921 C1QTNF8P60827 252 aa25.41■■□□□ 1.66
SMARCB1-202ENST00000344921 ERICH6Q7L0X2 663 aa25.41■■□□□ 1.66
SMARCB1-202ENST00000344921 CNTROBQ8N137 903 aa25.41■■□□□ 1.66
SMARCB1-202ENST00000344921 TEKT1Q969V4 418 aa25.41■■□□□ 1.66
SMARCB1-202ENST00000344921 DCPSQ96C86 337 aaKnown RBP25.41■■□□□ 1.66
SMARCB1-202ENST00000344921 ZAP70P43403 619 aa25.4■■□□□ 1.66
SMARCB1-202ENST00000344921 CRKP46108 304 aa25.4■■□□□ 1.66
SMARCB1-202ENST00000344921 DZIP1Q86YF9 867 aaKnown RBP25.4■■□□□ 1.66
SMARCB1-202ENST00000344921 GPATCH3Q96I76 525 aa25.4■■□□□ 1.66
SMARCB1-202ENST00000344921 LRP2BPQ9P2M1 347 aa25.4■■□□□ 1.66
SMARCB1-202ENST00000344921 PCDHAC2Q9Y5I4 1007 aa25.4■■□□□ 1.66
SMARCB1-202ENST00000344921 SMC5Q8IY18 1101 aa25.4■■□□□ 1.66
SMARCB1-202ENST00000344921 GGA3Q9NZ52 723 aa25.4■■□□□ 1.66
SMARCB1-202ENST00000344921 ASTN2O75129 1339 aaPredicted RBP25.39■■□□□ 1.66
SMARCB1-202ENST00000344921 MYO1BO43795 1136 aa25.39■■□□□ 1.65
SMARCB1-202ENST00000344921 HDLBPQ00341 1268 aaKnown RBP25.39■■□□□ 1.65
SMARCB1-202ENST00000344921 ANGEL2Q5VTE6 544 aaKnown RBP25.39■■□□□ 1.65
SMARCB1-202ENST00000344921 MTMR14Q8NCE2 650 aa25.39■■□□□ 1.65
SMARCB1-202ENST00000344921 RAI14Q9P0K7 980 aa25.39■■□□□ 1.65
SMARCB1-202ENST00000344921 PGAP2Q9UHJ9 254 aa25.39■■□□□ 1.65
SMARCB1-202ENST00000344921 NDUFB9Q9Y6M9 179 aa25.39■■□□□ 1.65
SMARCB1-202ENST00000344921 AKAP11Q9UKA4 1901 aa25.39■■□□□ 1.65
SMARCB1-202ENST00000344921 CYP2E1P05181 493 aaPredicted RBP25.38■■□□□ 1.65
SMARCB1-202ENST00000344921 SPDYE2BA6NHP3 402 aa25.37■■□□□ 1.65
SMARCB1-202ENST00000344921 SPDYE6P0CI01 402 aa25.37■■□□□ 1.65
SMARCB1-202ENST00000344921 PRMT6Q96LA8 375 aaPredicted RBP25.37■■□□□ 1.65
SMARCB1-202ENST00000344921 DNAJC2Q99543 621 aaKnown RBP25.37■■□□□ 1.65
SMARCB1-202ENST00000344921 ECHDC1Q9NTX5 307 aa25.37■■□□□ 1.65
SMARCB1-202ENST00000344921 DIXDC1Q155Q3 683 aa25.37■■□□□ 1.65
SMARCB1-202ENST00000344921 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.37■■□□□ 1.65
SMARCB1-202ENST00000344921 MRIQ9BWK5 157 aa25.37■■□□□ 1.65
SMARCB1-202ENST00000344921 BOLA2Q9H3K6 86 aa25.37■■□□□ 1.65
SMARCB1-202ENST00000344921 ATP5JP18859 108 aa25.36■■□□□ 1.65
SMARCB1-202ENST00000344921 HHIPL2Q6UWX4 724 aa25.36■■□□□ 1.65
SMARCB1-202ENST00000344921 CDC37L1Q7L3B6 337 aa25.36■■□□□ 1.65
SMARCB1-202ENST00000344921 SULF1Q8IWU6 871 aa25.36■■□□□ 1.65
SMARCB1-202ENST00000344921 ZBED3Q96IU2 234 aaPredicted RBP25.36■■□□□ 1.65
SMARCB1-202ENST00000344921 GLIS2Q9BZE0 524 aaPredicted RBP25.36■■□□□ 1.65
SMARCB1-202ENST00000344921 LNPKQ9C0E8 428 aa25.36■■□□□ 1.65
SMARCB1-202ENST00000344921 KRT26Q7Z3Y9 468 aa25.35■■□□□ 1.65
SMARCB1-202ENST00000344921 SLF2Q8IX21 1173 aa25.35■■□□□ 1.65
SMARCB1-202ENST00000344921 POLR2AP24928 1970 aaKnown RBP25.35■■□□□ 1.65
SMARCB1-202ENST00000344921 CLRN2A0PK11 232 aa25.34■■□□□ 1.65
SMARCB1-202ENST00000344921 MECOMQ03112 1051 aa25.34■■□□□ 1.65
SMARCB1-202ENST00000344921 USP48Q86UV5 1035 aa25.34■■□□□ 1.65
SMARCB1-202ENST00000344921 ITGBL1O95965 494 aaPredicted RBP25.34■■□□□ 1.65
SMARCB1-202ENST00000344921 TSHZ3Q63HK5 1081 aa25.34■■□□□ 1.65
SMARCB1-202ENST00000344921 ZDHHC15Q96MV8 337 aa25.34■■□□□ 1.65
SMARCB1-202ENST00000344921 TDRD3Q9H7E2 651 aaKnown RBP25.34■■□□□ 1.65
SMARCB1-202ENST00000344921 VEZTQ9HBM0 779 aa25.34■■□□□ 1.65
SMARCB1-202ENST00000344921 SCAF8Q9UPN6 1271 aaKnown RBP25.34■■□□□ 1.65
SMARCB1-202ENST00000344921 IDH1O75874 414 aaKnown RBP25.33■■□□□ 1.65
SMARCB1-202ENST00000344921 TTF1Q15361 905 aaPredicted RBP25.33■■□□□ 1.65
SMARCB1-202ENST00000344921 CHD1LQ86WJ1 897 aa25.33■■□□□ 1.65
SMARCB1-202ENST00000344921 OTUD7AQ8TE49 926 aaPredicted RBP25.33■■□□□ 1.65
SMARCB1-202ENST00000344921 ANTXR1Q9H6X2 564 aa25.33■■□□□ 1.65
SMARCB1-202ENST00000344921 PIH1D3Q9NQM4 214 aaKnown RBP25.33■■□□□ 1.65
SMARCB1-202ENST00000344921 PITPNM2Q9BZ72 1349 aa25.33■■□□□ 1.65
SMARCB1-202ENST00000344921 GOLIM4O00461 696 aa25.32■■□□□ 1.64
SMARCB1-202ENST00000344921 MX1P20591 662 aa25.32■■□□□ 1.64
SMARCB1-202ENST00000344921 GSTO1P78417 241 aa25.32■■□□□ 1.64
SMARCB1-202ENST00000344921 NUCB1Q02818 461 aa25.32■■□□□ 1.64
SMARCB1-202ENST00000344921 NSUN4Q96CB9 384 aaKnown RBP25.32■■□□□ 1.64
SMARCB1-202ENST00000344921 DAGLAQ9Y4D2 1042 aa25.32■■□□□ 1.64
SMARCB1-202ENST00000344921 TRAF5O00463 557 aa25.32■■□□□ 1.64
SMARCB1-202ENST00000344921 MYH2Q9UKX2 1941 aa25.31■■□□□ 1.64
SMARCB1-202ENST00000344921 ADM5C9JUS6 153 aa25.31■■□□□ 1.64
SMARCB1-202ENST00000344921 ERC2O15083 957 aa25.31■■□□□ 1.64
SMARCB1-202ENST00000344921 LDHCP07864 332 aa25.31■■□□□ 1.64
SMARCB1-202ENST00000344921 APOBEC3FQ8IUX4 373 aaKnown RBP25.31■■□□□ 1.64
SMARCB1-202ENST00000344921 HAUS7Q99871 368 aa25.31■■□□□ 1.64
SMARCB1-202ENST00000344921 PAG1Q9NWQ8 432 aa25.31■■□□□ 1.64
SMARCB1-202ENST00000344921 TTC41PQ6P2S7 1318 aa25.31■■□□□ 1.64
SMARCB1-202ENST00000344921 ECM29Q5VYK3 1845 aa25.3■■□□□ 1.64
SMARCB1-202ENST00000344921 MAP3K12Q12852 859 aa25.3■■□□□ 1.64
SMARCB1-202ENST00000344921 NAA16Q6N069 864 aaPredicted RBP25.3■■□□□ 1.64
SMARCB1-202ENST00000344921 APOBEC3HQ6NTF7 200 aaKnown RBP25.3■■□□□ 1.64
SMARCB1-202ENST00000344921 ZNF70Q9UC06 446 aaPredicted RBP25.3■■□□□ 1.64
SMARCB1-202ENST00000344921 AOX1Q06278 1338 aa25.3■■□□□ 1.64
SMARCB1-202ENST00000344921 MYO5AQ9Y4I1 1855 aaKnown RBP25.3■■□□□ 1.64
SMARCB1-202ENST00000344921 FMR1Q06787 632 aaKnown RBP eCLIP25.29■■□□□ 1.64
SMARCB1-202ENST00000344921 EDC3Q96F86 508 aaKnown RBP25.29■■□□□ 1.64
SMARCB1-202ENST00000344921 TMOD2Q9NZR1 351 aa25.29■■□□□ 1.64
SMARCB1-202ENST00000344921 SPDYE2Q495Y8 402 aa25.29■■□□□ 1.64
SMARCB1-202ENST00000344921 DLK2Q6UY11 383 aa25.29■■□□□ 1.64
SMARCB1-202ENST00000344921 ZNF408Q9H9D4 720 aa25.29■■□□□ 1.64
SMARCB1-202ENST00000344921 MROH7-TTC4A0A0A0MT08 1334 aa25.28■■□□□ 1.64
SMARCB1-202ENST00000344921 PASKQ96RG2 1323 aa25.28■■□□□ 1.64
SMARCB1-202ENST00000344921 ZNF384Q8TF68 577 aa25.28■■□□□ 1.64
SMARCB1-202ENST00000344921 FAM163AQ96GL9 167 aaPredicted RBP25.27■■□□□ 1.64
SMARCB1-202ENST00000344921 NOL10Q9BSC4 688 aaKnown RBP25.27■■□□□ 1.64
SMARCB1-202ENST00000344921 TCP10L2B9ZVM9 353 aa25.26■■□□□ 1.63
SMARCB1-202ENST00000344921 IGSF3O75054 1194 aa25.26■■□□□ 1.63
SMARCB1-202ENST00000344921 GLRX3O76003 335 aaKnown RBP25.26■■□□□ 1.63
SMARCB1-202ENST00000344921 BTDP43251 543 aa25.26■■□□□ 1.63
SMARCB1-202ENST00000344921 TNFAIP1Q13829 316 aa25.26■■□□□ 1.63
SMARCB1-202ENST00000344921 MAGEB6Q8N7X4 407 aa25.26■■□□□ 1.63
SMARCB1-202ENST00000344921 USP40Q9NVE5 1235 aa25.26■■□□□ 1.63
SMARCB1-202ENST00000344921 GAKO14976 1311 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms