RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 HMMRO75330 724 aa16.96■□□□□ 0.31
TPM4-202ENST00000344824 PHKA1P46020 1223 aa16.96■□□□□ 0.31
TPM4-202ENST00000344824 MMP14P50281 582 aa16.96■□□□□ 0.31
TPM4-202ENST00000344824 HDAC1Q13547 482 aaPredicted RBP16.96■□□□□ 0.31
TPM4-202ENST00000344824 PRAMEF18Q5VWM3 479 aa16.96■□□□□ 0.31
TPM4-202ENST00000344824 CYP4F22Q6NT55 531 aa16.96■□□□□ 0.31
TPM4-202ENST00000344824 GBA2Q9HCG7 927 aaPredicted RBP16.96■□□□□ 0.31
TPM4-202ENST00000344824 TLL2Q9Y6L7 1015 aa16.96■□□□□ 0.31
TPM4-202ENST00000344824 PAPPA2Q9BXP8 1791 aa16.96■□□□□ 0.31
TPM4-202ENST00000344824 SURF6O75683 361 aaKnown RBP16.96■□□□□ 0.3
TPM4-202ENST00000344824 HUNKP57058 714 aa16.96■□□□□ 0.3
TPM4-202ENST00000344824 TIMM10P62072 90 aa16.96■□□□□ 0.3
TPM4-202ENST00000344824 POLA2Q14181 598 aa16.96■□□□□ 0.3
TPM4-202ENST00000344824 GRIK5Q16478 980 aa16.96■□□□□ 0.3
TPM4-202ENST00000344824 GORABQ5T7V8 394 aa16.96■□□□□ 0.3
TPM4-202ENST00000344824 CENPQQ7L2Z9 268 aaPredicted RBP16.96■□□□□ 0.3
TPM4-202ENST00000344824 SPDYE2BA6NHP3 402 aa16.95■□□□□ 0.3
TPM4-202ENST00000344824 SPDYE6P0CI01 402 aa16.95■□□□□ 0.3
TPM4-202ENST00000344824 CRKP46108 304 aa16.95■□□□□ 0.3
TPM4-202ENST00000344824 TTLL12Q14166 644 aaPredicted RBP16.95■□□□□ 0.3
TPM4-202ENST00000344824 APOBEC3FQ8IUX4 373 aaKnown RBP16.95■□□□□ 0.3
TPM4-202ENST00000344824 C2orf69Q8N8R5 385 aa16.95■□□□□ 0.3
TPM4-202ENST00000344824 JMYQ8N9B5 988 aa16.95■□□□□ 0.3
TPM4-202ENST00000344824 SSH3Q8TE77 659 aa16.95■□□□□ 0.3
TPM4-202ENST00000344824 XAGE2Q96GT9 111 aa16.95■□□□□ 0.3
TPM4-202ENST00000344824 CAPNS2Q96L46 248 aa16.95■□□□□ 0.3
TPM4-202ENST00000344824 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.95■□□□□ 0.3
TPM4-202ENST00000344824 THSD7BQ9C0I4 1608 aa16.94■□□□□ 0.3
TPM4-202ENST00000344824 CCDC102BQ68D86 513 aa16.94■□□□□ 0.3
TPM4-202ENST00000344824 SAPCD2Q86UD0 394 aa16.94■□□□□ 0.3
TPM4-202ENST00000344824 AOX1Q06278 1338 aa16.94■□□□□ 0.3
TPM4-202ENST00000344824 WDR33Q9C0J8 1336 aaKnown RBP16.94■□□□□ 0.3
TPM4-202ENST00000344824 APBB1O00213 710 aa16.93■□□□□ 0.3
TPM4-202ENST00000344824 NF2P35240 595 aa16.93■□□□□ 0.3
TPM4-202ENST00000344824 PRKG1Q13976 671 aa16.93■□□□□ 0.3
TPM4-202ENST00000344824 WDR66Q8TBY9 1149 aa16.93■□□□□ 0.3
TPM4-202ENST00000344824 ZBED3Q96IU2 234 aaPredicted RBP16.93■□□□□ 0.3
TPM4-202ENST00000344824 PRMT6Q96LA8 375 aaPredicted RBP16.93■□□□□ 0.3
TPM4-202ENST00000344824 BCL11AQ9H165 835 aa16.93■□□□□ 0.3
TPM4-202ENST00000344824 DENND2AQ9ULE3 1009 aa16.93■□□□□ 0.3
TPM4-202ENST00000344824 MAST3O60307 1309 aa16.93■□□□□ 0.3
TPM4-202ENST00000344824 MYO5AQ9Y4I1 1855 aaKnown RBP16.93■□□□□ 0.3
TPM4-202ENST00000344824 HSPA1AP0DMV8 641 aaKnown RBP16.92■□□□□ 0.3
TPM4-202ENST00000344824 HSPA1BP0DMV9 641 aaKnown RBP16.92■□□□□ 0.3
TPM4-202ENST00000344824 ECE1P42892 770 aa16.92■□□□□ 0.3
TPM4-202ENST00000344824 MTMR14Q8NCE2 650 aa16.92■□□□□ 0.3
TPM4-202ENST00000344824 TEKT1Q969V4 418 aa16.92■□□□□ 0.3
TPM4-202ENST00000344824 SERPINA10Q9UK55 444 aa16.92■□□□□ 0.3
TPM4-202ENST00000344824 EXOC6BQ9Y2D4 811 aa16.92■□□□□ 0.3
TPM4-202ENST00000344824 RASGRF1Q13972 1273 aa16.91■□□□□ 0.3
TPM4-202ENST00000344824 TDRD3Q9H7E2 651 aaKnown RBP16.91■□□□□ 0.3
TPM4-202ENST00000344824 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.91■□□□□ 0.3
TPM4-202ENST00000344824 MAST2Q6P0Q8 1798 aa16.9■□□□□ 0.3
TPM4-202ENST00000344824 AOC2O75106 756 aa16.9■□□□□ 0.3
TPM4-202ENST00000344824 PRDX5P30044 214 aa16.9■□□□□ 0.3
TPM4-202ENST00000344824 TNNI3KQ59H18 835 aa16.9■□□□□ 0.3
TPM4-202ENST00000344824 ZNF70Q9UC06 446 aaPredicted RBP16.9■□□□□ 0.3
TPM4-202ENST00000344824 ABCF2Q9UG63 623 aa16.9■□□□□ 0.3
TPM4-202ENST00000344824 FPGT-TNNI3KV9GXZ4 949 aa16.9■□□□□ 0.3
TPM4-202ENST00000344824 OTOFQ9HC10 1997 aa16.9■□□□□ 0.3
TPM4-202ENST00000344824 AKAP11Q9UKA4 1901 aa16.9■□□□□ 0.3
TPM4-202ENST00000344824 TCP10L2B9ZVM9 353 aa16.89■□□□□ 0.29
TPM4-202ENST00000344824 SEMA3EO15041 775 aa16.89■□□□□ 0.29
TPM4-202ENST00000344824 LDHBP07195 334 aaKnown RBP16.89■□□□□ 0.29
TPM4-202ENST00000344824 MOB2Q70IA6 237 aa16.89■□□□□ 0.29
TPM4-202ENST00000344824 SKAP1Q86WV1 359 aa16.89■□□□□ 0.29
TPM4-202ENST00000344824 GCC1Q96CN9 775 aa16.89■□□□□ 0.29
TPM4-202ENST00000344824 DEFB129Q9H1M3 183 aa16.89■□□□□ 0.29
TPM4-202ENST00000344824 DCTPP1Q9H773 170 aa16.89■□□□□ 0.29
TPM4-202ENST00000344824 ZNF157P51786 506 aaPredicted RBP16.88■□□□□ 0.29
TPM4-202ENST00000344824 DIXDC1Q155Q3 683 aa16.88■□□□□ 0.29
TPM4-202ENST00000344824 SPDYE2Q495Y8 402 aa16.88■□□□□ 0.29
TPM4-202ENST00000344824 TTC39AQ5SRH9 613 aa16.88■□□□□ 0.29
TPM4-202ENST00000344824 PI16Q6UXB8 463 aa16.88■□□□□ 0.29
TPM4-202ENST00000344824 DZIP1Q86YF9 867 aaKnown RBP16.88■□□□□ 0.29
TPM4-202ENST00000344824 SMC5Q8IY18 1101 aa16.88■□□□□ 0.29
TPM4-202ENST00000344824 AIDAQ96BJ3 306 aa16.88■□□□□ 0.29
TPM4-202ENST00000344824 DBNDD2Q9BQY9 259 aa16.88■□□□□ 0.29
TPM4-202ENST00000344824 TMOD2Q9NZR1 351 aa16.88■□□□□ 0.29
TPM4-202ENST00000344824 CACNB3P54284 484 aa16.87■□□□□ 0.29
TPM4-202ENST00000344824 TNFAIP1Q13829 316 aa16.87■□□□□ 0.29
TPM4-202ENST00000344824 ANKRD45Q5TZF3 282 aa16.87■□□□□ 0.29
TPM4-202ENST00000344824 RGMBQ6NW40 437 aa16.87■□□□□ 0.29
TPM4-202ENST00000344824 ZGPATQ8N5A5 531 aaKnown RBP16.87■□□□□ 0.29
TPM4-202ENST00000344824 FZD1Q9UP38 647 aa16.87■□□□□ 0.29
TPM4-202ENST00000344824 SUGT1Q9Y2Z0 365 aa16.87■□□□□ 0.29
TPM4-202ENST00000344824 UBE2Q2LH0YL09 131 aa16.87■□□□□ 0.29
TPM4-202ENST00000344824 HDLBPQ00341 1268 aaKnown RBP16.87■□□□□ 0.29
TPM4-202ENST00000344824 HHIPL1Q96JK4 782 aa16.87■□□□□ 0.29
TPM4-202ENST00000344824 CCDC8Q9H0W5 538 aaPredicted RBP16.87■□□□□ 0.29
TPM4-202ENST00000344824 NOP58Q9Y2X3 529 aaKnown RBP16.87■□□□□ 0.29
TPM4-202ENST00000344824 SSC5DA1L4H1 1573 aa16.86■□□□□ 0.29
TPM4-202ENST00000344824 DOCK2Q92608 1830 aa16.86■□□□□ 0.29
TPM4-202ENST00000344824 SALL1Q9NSC2 1324 aa16.86■□□□□ 0.29
TPM4-202ENST00000344824 SMARCA5O60264 1052 aaPredicted RBP16.86■□□□□ 0.29
TPM4-202ENST00000344824 TNNI2P48788 182 aa16.86■□□□□ 0.29
TPM4-202ENST00000344824 FKBP1BP68106 108 aa16.86■□□□□ 0.29
TPM4-202ENST00000344824 RASA3Q14644 834 aa16.86■□□□□ 0.29
TPM4-202ENST00000344824 CCDC158Q5M9N0 1113 aa16.86■□□□□ 0.29
TPM4-202ENST00000344824 ERC1Q8IUD2 1116 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms