RNA–Protein interactions for RNA: ENST00000343139.9

HLA-DQA1-201, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-201ENST00000343139 ZDHHC15Q96MV8 337 aa16.04■□□□□ 0.16
HLA-DQA1-201ENST00000343139 HMG20BQ9P0W2 317 aa16.04■□□□□ 0.16
HLA-DQA1-201ENST00000343139 LDHBP07195 334 aaKnown RBP16.04■□□□□ 0.16
HLA-DQA1-201ENST00000343139 GRIK5Q16478 980 aa16.04■□□□□ 0.16
HLA-DQA1-201ENST00000343139 TTC39AQ5SRH9 613 aa16.04■□□□□ 0.16
HLA-DQA1-201ENST00000343139 PRMT6Q96LA8 375 aaPredicted RBP16.04■□□□□ 0.16
HLA-DQA1-201ENST00000343139 LRRCC1Q9C099 1032 aa16.04■□□□□ 0.16
HLA-DQA1-201ENST00000343139 ASTN2O75129 1339 aaPredicted RBP16.03■□□□□ 0.16
HLA-DQA1-201ENST00000343139 TRAF5O00463 557 aa16.03■□□□□ 0.16
HLA-DQA1-201ENST00000343139 MCAMP43121 646 aa16.03■□□□□ 0.16
HLA-DQA1-201ENST00000343139 HDAC1Q13547 482 aaPredicted RBP16.03■□□□□ 0.16
HLA-DQA1-201ENST00000343139 CST9Q5W186 159 aa16.03■□□□□ 0.16
HLA-DQA1-201ENST00000343139 AACSQ86V21 672 aa16.03■□□□□ 0.16
HLA-DQA1-201ENST00000343139 PPP2R3BQ9Y5P8 575 aa16.03■□□□□ 0.16
HLA-DQA1-201ENST00000343139 PRDX5P30044 214 aa16.02■□□□□ 0.16
HLA-DQA1-201ENST00000343139 RBM5P52756 815 aaKnown RBP eCLIP16.02■□□□□ 0.16
HLA-DQA1-201ENST00000343139 SLF2Q8IX21 1173 aa16.02■□□□□ 0.16
HLA-DQA1-201ENST00000343139 FAM163AQ96GL9 167 aaPredicted RBP16.02■□□□□ 0.16
HLA-DQA1-201ENST00000343139 CCDC8Q9H0W5 538 aaPredicted RBP16.02■□□□□ 0.16
HLA-DQA1-201ENST00000343139 IL1RAPL2Q9NP60 686 aa16.02■□□□□ 0.16
HLA-DQA1-201ENST00000343139 SPDYE2Q495Y8 402 aa16.01■□□□□ 0.15
HLA-DQA1-201ENST00000343139 DNAJC5GQ8N7S2 189 aa16.01■□□□□ 0.15
HLA-DQA1-201ENST00000343139 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.01■□□□□ 0.15
HLA-DQA1-201ENST00000343139 TLR7Q9NYK1 1049 aaKnown RBP16.01■□□□□ 0.15
HLA-DQA1-201ENST00000343139 ADM5C9JUS6 153 aa16■□□□□ 0.15
HLA-DQA1-201ENST00000343139 CELF2O95319 508 aaKnown RBP16■□□□□ 0.15
HLA-DQA1-201ENST00000343139 IFIT2P09913 472 aaKnown RBP16■□□□□ 0.15
HLA-DQA1-201ENST00000343139 TNFAIP1Q13829 316 aa16■□□□□ 0.15
HLA-DQA1-201ENST00000343139 FKBP1CQ5VVH2 108 aa16■□□□□ 0.15
HLA-DQA1-201ENST00000343139 APOBEC3HQ6NTF7 200 aaKnown RBP16■□□□□ 0.15
HLA-DQA1-201ENST00000343139 TMED8Q6PL24 325 aaPredicted RBP16■□□□□ 0.15
HLA-DQA1-201ENST00000343139 HHIPL1Q96JK4 782 aa16■□□□□ 0.15
HLA-DQA1-201ENST00000343139 RASSF10A6NK89 507 aa16■□□□□ 0.15
HLA-DQA1-201ENST00000343139 FKBP1BP68106 108 aa16■□□□□ 0.15
HLA-DQA1-201ENST00000343139 ERICH6Q7L0X2 663 aa16■□□□□ 0.15
HLA-DQA1-201ENST00000343139 CDCA5Q96FF9 252 aa16■□□□□ 0.15
HLA-DQA1-201ENST00000343139 ABCF2Q9UG63 623 aa16■□□□□ 0.15
HLA-DQA1-201ENST00000343139 PCDHAC2Q9Y5I4 1007 aa16■□□□□ 0.15
HLA-DQA1-201ENST00000343139 GAKO14976 1311 aa15.99■□□□□ 0.15
HLA-DQA1-201ENST00000343139 FMR1Q06787 632 aaKnown RBP eCLIP15.99■□□□□ 0.15
HLA-DQA1-201ENST00000343139 PI16Q6UXB8 463 aa15.99■□□□□ 0.15
HLA-DQA1-201ENST00000343139 GCC1Q96CN9 775 aa15.99■□□□□ 0.15
HLA-DQA1-201ENST00000343139 DEFB129Q9H1M3 183 aa15.99■□□□□ 0.15
HLA-DQA1-201ENST00000343139 ZNF70Q9UC06 446 aaPredicted RBP15.99■□□□□ 0.15
HLA-DQA1-201ENST00000343139 TLL2Q9Y6L7 1015 aa15.99■□□□□ 0.15
HLA-DQA1-201ENST00000343139 CEP350Q5VT06 3117 aa15.99■□□□□ 0.15
HLA-DQA1-201ENST00000343139 APBB1O00213 710 aa15.98■□□□□ 0.15
HLA-DQA1-201ENST00000343139 GSTO1P78417 241 aa15.98■□□□□ 0.15
HLA-DQA1-201ENST00000343139 SAPCD2Q86UD0 394 aa15.98■□□□□ 0.15
HLA-DQA1-201ENST00000343139 DZIP1Q86YF9 867 aaKnown RBP15.98■□□□□ 0.15
HLA-DQA1-201ENST00000343139 KLRG1Q96E93 195 aa15.98■□□□□ 0.15
HLA-DQA1-201ENST00000343139 DAGLAQ9Y4D2 1042 aa15.98■□□□□ 0.15
HLA-DQA1-201ENST00000343139 CNTNAP1P78357 1384 aa15.97■□□□□ 0.15
HLA-DQA1-201ENST00000343139 MAP4K4O95819 1239 aaPredicted RBP15.97■□□□□ 0.15
HLA-DQA1-201ENST00000343139 CYP2E1P05181 493 aaPredicted RBP15.97■□□□□ 0.15
HLA-DQA1-201ENST00000343139 MECOMQ03112 1051 aa15.97■□□□□ 0.15
HLA-DQA1-201ENST00000343139 DIXDC1Q155Q3 683 aa15.97■□□□□ 0.15
HLA-DQA1-201ENST00000343139 EXOC6Q8TAG9 804 aa15.97■□□□□ 0.15
HLA-DQA1-201ENST00000343139 NSUN4Q96CB9 384 aaKnown RBP15.97■□□□□ 0.15
HLA-DQA1-201ENST00000343139 TDRD3Q9H7E2 651 aaKnown RBP15.97■□□□□ 0.15
HLA-DQA1-201ENST00000343139 CLRN2A0PK11 232 aa15.96■□□□□ 0.15
HLA-DQA1-201ENST00000343139 LDHCP07864 332 aa15.96■□□□□ 0.15
HLA-DQA1-201ENST00000343139 ATP5JP18859 108 aa15.96■□□□□ 0.15
HLA-DQA1-201ENST00000343139 NF2P35240 595 aa15.96■□□□□ 0.15
HLA-DQA1-201ENST00000343139 ZAP70P43403 619 aa15.96■□□□□ 0.15
HLA-DQA1-201ENST00000343139 TNNI2P48788 182 aa15.96■□□□□ 0.15
HLA-DQA1-201ENST00000343139 HTRA3P83110 453 aa15.96■□□□□ 0.15
HLA-DQA1-201ENST00000343139 FAM83AQ86UY5 434 aa15.96■□□□□ 0.15
HLA-DQA1-201ENST00000343139 C2orf69Q8N8R5 385 aa15.96■□□□□ 0.15
HLA-DQA1-201ENST00000343139 GBA2Q9HCG7 927 aaPredicted RBP15.96■□□□□ 0.15
HLA-DQA1-201ENST00000343139 TMOD2Q9NZR1 351 aa15.96■□□□□ 0.15
HLA-DQA1-201ENST00000343139 LRP2BPQ9P2M1 347 aa15.96■□□□□ 0.15
HLA-DQA1-201ENST00000343139 MYH13Q9UKX3 1938 aa15.96■□□□□ 0.15
HLA-DQA1-201ENST00000343139 AOX1Q06278 1338 aa15.96■□□□□ 0.15
HLA-DQA1-201ENST00000343139 TTF1Q15361 905 aaPredicted RBP15.96■□□□□ 0.14
HLA-DQA1-201ENST00000343139 ZNF384Q8TF68 577 aa15.96■□□□□ 0.14
HLA-DQA1-201ENST00000343139 RWDD1Q9H446 243 aaPredicted RBP15.96■□□□□ 0.14
HLA-DQA1-201ENST00000343139 VEZTQ9HBM0 779 aa15.96■□□□□ 0.14
HLA-DQA1-201ENST00000343139 ABT1Q9ULW3 272 aaKnown RBP15.96■□□□□ 0.14
HLA-DQA1-201ENST00000343139 MROH7-TTC4A0A0A0MT08 1334 aa15.95■□□□□ 0.14
HLA-DQA1-201ENST00000343139 GPR75-ASB3A0A0A6YYF3 556 aa15.95■□□□□ 0.14
HLA-DQA1-201ENST00000343139 RASA3Q14644 834 aa15.95■□□□□ 0.14
HLA-DQA1-201ENST00000343139 DEFB115Q30KQ5 88 aa15.95■□□□□ 0.14
HLA-DQA1-201ENST00000343139 SUPT20HL1Q3ZLR7 823 aa15.95■□□□□ 0.14
HLA-DQA1-201ENST00000343139 DLK2Q6UY11 383 aa15.95■□□□□ 0.14
HLA-DQA1-201ENST00000343139 TBC1D9Q6ZT07 1266 aa15.95■□□□□ 0.14
HLA-DQA1-201ENST00000343139 JMYQ8N9B5 988 aa15.95■□□□□ 0.14
HLA-DQA1-201ENST00000343139 ZNF408Q9H9D4 720 aa15.95■□□□□ 0.14
HLA-DQA1-201ENST00000343139 SNRKQ9NRH2 765 aa15.95■□□□□ 0.14
HLA-DQA1-201ENST00000343139 RAI14Q9P0K7 980 aa15.95■□□□□ 0.14
HLA-DQA1-201ENST00000343139 UNCXA6NJT0 531 aa15.94■□□□□ 0.14
HLA-DQA1-201ENST00000343139 CDC42EP5Q6NZY7 148 aa15.94■□□□□ 0.14
HLA-DQA1-201ENST00000343139 IDI2Q9BXS1 227 aa15.94■□□□□ 0.14
HLA-DQA1-201ENST00000343139 TRPM7Q96QT4 1865 aa15.94■□□□□ 0.14
HLA-DQA1-201ENST00000343139 RPAP1Q9BWH6 1393 aaPredicted RBP15.94■□□□□ 0.14
HLA-DQA1-201ENST00000343139 ECM29Q5VYK3 1845 aa15.93■□□□□ 0.14
HLA-DQA1-201ENST00000343139 SMARCA5O60264 1052 aaPredicted RBP15.93■□□□□ 0.14
HLA-DQA1-201ENST00000343139 NPM3O75607 178 aaKnown RBP15.93■□□□□ 0.14
HLA-DQA1-201ENST00000343139 MAP3K11Q16584 847 aa15.93■□□□□ 0.14
HLA-DQA1-201ENST00000343139 SMC5Q8IY18 1101 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms