RNA–Protein interactions for RNA: ENST00000343017.11

SNX18-202, Transcript of sorting nexin 18, humanhuman

BASIC

Gene SNX18, Length 3,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18-202ENST00000343017 MROH7-TTC4A0A0A0MT08 1334 aa17.56■□□□□ 0.4
SNX18-202ENST00000343017 KIF28PB7ZC32 967 aa17.56■□□□□ 0.4
SNX18-202ENST00000343017 GTF2A1P52655 376 aaPredicted RBP17.56■□□□□ 0.4
SNX18-202ENST00000343017 TFCP2Q12800 502 aa17.56■□□□□ 0.4
SNX18-202ENST00000343017 KIFC2Q96AC6 838 aa17.56■□□□□ 0.4
SNX18-202ENST00000343017 DBF4Q9UBU7 674 aaPredicted RBP17.56■□□□□ 0.4
SNX18-202ENST00000343017 TTLL5Q6EMB2 1281 aa17.56■□□□□ 0.4
SNX18-202ENST00000343017 PACS2Q86VP3 889 aa17.56■□□□□ 0.4
SNX18-202ENST00000343017 BAG1Q99933 345 aaPredicted RBP17.56■□□□□ 0.4
SNX18-202ENST00000343017 DBNDD2Q9BQY9 259 aa17.56■□□□□ 0.4
SNX18-202ENST00000343017 FAN1Q9Y2M0 1017 aa17.56■□□□□ 0.4
SNX18-202ENST00000343017 ARHGAP23Q9P227 1491 aa17.55■□□□□ 0.4
SNX18-202ENST00000343017 RABGGTAQ92696 567 aa17.55■□□□□ 0.4
SNX18-202ENST00000343017 SALL1Q9NSC2 1324 aa17.55■□□□□ 0.4
SNX18-202ENST00000343017 EXOSC10Q01780 885 aaKnown RBP17.55■□□□□ 0.4
SNX18-202ENST00000343017 AXDND1Q5T1B0 1012 aaPredicted RBP17.55■□□□□ 0.4
SNX18-202ENST00000343017 LZTFL1Q9NQ48 299 aa17.55■□□□□ 0.4
SNX18-202ENST00000343017 TXLNAP40222 546 aa17.54■□□□□ 0.4
SNX18-202ENST00000343017 GOLGA1Q92805 767 aa17.54■□□□□ 0.4
SNX18-202ENST00000343017 DDX17Q92841 729 aaKnown RBP17.54■□□□□ 0.4
SNX18-202ENST00000343017 PNKPQ96T60 521 aa17.54■□□□□ 0.4
SNX18-202ENST00000343017 MRPL44Q9H9J2 332 aaKnown RBP17.54■□□□□ 0.4
SNX18-202ENST00000343017 ARHGAP6O43182 974 aa17.54■□□□□ 0.4
SNX18-202ENST00000343017 CDC27P30260 824 aa17.54■□□□□ 0.4
SNX18-202ENST00000343017 MYL5Q02045 173 aa17.54■□□□□ 0.4
SNX18-202ENST00000343017 PDE4BQ07343 736 aa17.54■□□□□ 0.4
SNX18-202ENST00000343017 ATL3Q6DD88 541 aa17.54■□□□□ 0.4
SNX18-202ENST00000343017 LEKR1Q6ZMV7 388 aa17.54■□□□□ 0.4
SNX18-202ENST00000343017 BABAM1Q9NWV8 329 aa17.54■□□□□ 0.4
SNX18-202ENST00000343017 SLIT1O75093 1534 aa17.54■□□□□ 0.4
SNX18-202ENST00000343017 E7EWF7 191 aa17.54■□□□□ 0.4
SNX18-202ENST00000343017 TAF7LQ5H9L4 462 aa17.54■□□□□ 0.4
SNX18-202ENST00000343017 C8orf76Q96K31 380 aa17.54■□□□□ 0.4
SNX18-202ENST00000343017 MAP2K7O14733 419 aa17.53■□□□□ 0.4
SNX18-202ENST00000343017 IKBKBO14920 756 aa17.53■□□□□ 0.4
SNX18-202ENST00000343017 MYSM1Q5VVJ2 828 aa17.53■□□□□ 0.4
SNX18-202ENST00000343017 N4BP2Q86UW6 1770 aaPredicted RBP17.53■□□□□ 0.4
SNX18-202ENST00000343017 FOXN1O15353 648 aa17.53■□□□□ 0.4
SNX18-202ENST00000343017 SYNE3Q6ZMZ3 975 aa17.53■□□□□ 0.4
SNX18-202ENST00000343017 KCNG4Q8TDN1 519 aa17.53■□□□□ 0.4
SNX18-202ENST00000343017 CLIC6Q96NY7 704 aa17.53■□□□□ 0.4
SNX18-202ENST00000343017 ANKZF1Q9H8Y5 726 aa17.53■□□□□ 0.4
SNX18-202ENST00000343017 RHOXF2BP0C7M4 288 aa17.52■□□□□ 0.4
SNX18-202ENST00000343017 ATP5JP18859 108 aa17.52■□□□□ 0.4
SNX18-202ENST00000343017 FOXP4Q8IVH2 680 aaPredicted RBP17.52■□□□□ 0.4
SNX18-202ENST00000343017 AIFM3Q96NN9 605 aa17.52■□□□□ 0.4
SNX18-202ENST00000343017 RHOXF2Q9BQY4 288 aa17.52■□□□□ 0.4
SNX18-202ENST00000343017 IGKV5-2P06315 115 aa17.52■□□□□ 0.4
SNX18-202ENST00000343017 SYKP43405 635 aa17.52■□□□□ 0.4
SNX18-202ENST00000343017 HAND2P61296 217 aa17.52■□□□□ 0.4
SNX18-202ENST00000343017 BEND6Q5SZJ8 279 aaPredicted RBP17.52■□□□□ 0.4
SNX18-202ENST00000343017 ICE2Q659A1 982 aa17.52■□□□□ 0.4
SNX18-202ENST00000343017 DRC1Q96MC2 740 aa17.52■□□□□ 0.4
SNX18-202ENST00000343017 ABCB6Q9NP58 842 aa17.52■□□□□ 0.4
SNX18-202ENST00000343017 LRRC37A3O60309 1634 aa17.52■□□□□ 0.39
SNX18-202ENST00000343017 LOC102724159A0A0B4J2E5 919 aa17.52■□□□□ 0.39
SNX18-202ENST00000343017 CHMP4BP1P59074 171 aa17.52■□□□□ 0.39
SNX18-202ENST00000343017 PWP2Q15269 919 aaKnown RBP17.52■□□□□ 0.39
SNX18-202ENST00000343017 AEBP2Q6ZN18 517 aaPredicted RBP17.52■□□□□ 0.39
SNX18-202ENST00000343017 STK11IPQ8N1F8 1099 aa17.52■□□□□ 0.39
SNX18-202ENST00000343017 TC2NQ8N9U0 490 aa17.52■□□□□ 0.39
SNX18-202ENST00000343017 LINS1Q8NG48 757 aa17.52■□□□□ 0.39
SNX18-202ENST00000343017 CCDC151A5D8V7 595 aa17.51■□□□□ 0.39
SNX18-202ENST00000343017 CBFA2T2O43439 604 aa17.51■□□□□ 0.39
SNX18-202ENST00000343017 TNNI3KQ59H18 835 aa17.51■□□□□ 0.39
SNX18-202ENST00000343017 SPECC1Q5M775 1068 aa17.51■□□□□ 0.39
SNX18-202ENST00000343017 ANO1Q5XXA6 986 aa17.51■□□□□ 0.39
SNX18-202ENST00000343017 PSD3Q9NYI0 1048 aa17.51■□□□□ 0.39
SNX18-202ENST00000343017 FPGT-TNNI3KV9GXZ4 949 aa17.51■□□□□ 0.39
SNX18-202ENST00000343017 SETD1BQ9UPS6 1966 aaKnown RBP17.51■□□□□ 0.39
SNX18-202ENST00000343017 GOLIM4O00461 696 aa17.51■□□□□ 0.39
SNX18-202ENST00000343017 TRMT44Q8IYL2 757 aaKnown RBP17.51■□□□□ 0.39
SNX18-202ENST00000343017 RGS22Q8NE09 1264 aa17.51■□□□□ 0.39
SNX18-202ENST00000343017 PLEKHG2Q9H7P9 1386 aa17.51■□□□□ 0.39
SNX18-202ENST00000343017 DIP2AQ14689 1571 aa17.51■□□□□ 0.39
SNX18-202ENST00000343017 EIF3CLB5ME19 914 aaKnown RBP17.5■□□□□ 0.39
SNX18-202ENST00000343017 BMP6P22004 513 aa17.5■□□□□ 0.39
SNX18-202ENST00000343017 SART3Q15020 963 aaKnown RBP17.5■□□□□ 0.39
SNX18-202ENST00000343017 EIF3CQ99613 913 aaKnown RBP17.5■□□□□ 0.39
SNX18-202ENST00000343017 DNAJC5Q9H3Z4 198 aa17.5■□□□□ 0.39
SNX18-202ENST00000343017 AKAP2Q9Y2D5 859 aa17.5■□□□□ 0.39
SNX18-202ENST00000343017 SOWAHDA6NJG2 315 aa17.5■□□□□ 0.39
SNX18-202ENST00000343017 CMA1P23946 247 aa17.5■□□□□ 0.39
SNX18-202ENST00000343017 CPLX3Q8WVH0 158 aa17.5■□□□□ 0.39
SNX18-202ENST00000343017 CCDC102AQ96A19 550 aa17.5■□□□□ 0.39
SNX18-202ENST00000343017 POLR3EQ9NVU0 708 aa17.5■□□□□ 0.39
SNX18-202ENST00000343017 MYL6BP14649 208 aa17.5■□□□□ 0.39
SNX18-202ENST00000343017 PIP4K2AP48426 406 aaPredicted RBP17.5■□□□□ 0.39
SNX18-202ENST00000343017 ZNF827Q17R98 1081 aa17.5■□□□□ 0.39
SNX18-202ENST00000343017 LRRC59Q96AG4 307 aaKnown RBP17.5■□□□□ 0.39
SNX18-202ENST00000343017 RGPD8O14715 1765 aaPredicted RBP17.49■□□□□ 0.39
SNX18-202ENST00000343017 YEATS4O95619 227 aa17.49■□□□□ 0.39
SNX18-202ENST00000343017 HMGB1P09429 215 aaKnown RBP17.49■□□□□ 0.39
SNX18-202ENST00000343017 LONRF3Q496Y0 759 aa17.49■□□□□ 0.39
SNX18-202ENST00000343017 SHC4Q6S5L8 630 aa17.49■□□□□ 0.39
SNX18-202ENST00000343017 JRKLQ9Y4A0 524 aa17.49■□□□□ 0.39
SNX18-202ENST00000343017 ABCC6O95255 1503 aa17.49■□□□□ 0.39
SNX18-202ENST00000343017 CUTAO60888 179 aa17.49■□□□□ 0.39
SNX18-202ENST00000343017 TTC31Q49AM3 519 aaPredicted RBP17.49■□□□□ 0.39
SNX18-202ENST00000343017 JAKMIP3Q5VZ66 844 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms