RNA–Protein interactions for RNA: ENST00000341165.10

NBR1-201, Transcript of NBR1, autophagy cargo receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NBR1, Length 4,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBR1-201ENST00000341165 GREM2Q9H772 168 aa9.26□□□□□ -0.93
NBR1-201ENST00000341165 RCOR1Q9UKL0 485 aa9.26□□□□□ -0.93
NBR1-201ENST00000341165 LIG1P18858 919 aa9.26□□□□□ -0.93
NBR1-201ENST00000341165 METAP2P50579 478 aaKnown RBP eCLIP9.26□□□□□ -0.93
NBR1-201ENST00000341165 FSIP1Q8NA03 581 aa9.26□□□□□ -0.93
NBR1-201ENST00000341165 CDC5LQ99459 802 aaKnown RBP9.26□□□□□ -0.93
NBR1-201ENST00000341165 RNF41Q9H4P4 317 aaPredicted RBP9.26□□□□□ -0.93
NBR1-201ENST00000341165 CCDC87Q9NVE4 849 aa9.26□□□□□ -0.93
NBR1-201ENST00000341165 CWC15Q9P013 229 aaKnown RBP9.26□□□□□ -0.93
NBR1-201ENST00000341165 BCCIPQ9P287 314 aaKnown RBP eCLIP9.26□□□□□ -0.93
NBR1-201ENST00000341165 THRAP3Q9Y2W1 955 aaKnown RBP9.26□□□□□ -0.93
NBR1-201ENST00000341165 SPEF2Q9C093 1822 aa9.26□□□□□ -0.93
NBR1-201ENST00000341165 TDO2P48775 406 aa9.26□□□□□ -0.93
NBR1-201ENST00000341165 FAM160A1Q05DH4 1040 aa9.26□□□□□ -0.93
NBR1-201ENST00000341165 STOX1Q6ZVD7 989 aa9.26□□□□□ -0.93
NBR1-201ENST00000341165 MRPS27Q92552 414 aaKnown RBP9.26□□□□□ -0.93
NBR1-201ENST00000341165 RIPOR2Q9Y4F9 1068 aa9.26□□□□□ -0.93
NBR1-201ENST00000341165 TAF6LQ9Y6J9 622 aa9.26□□□□□ -0.93
NBR1-201ENST00000341165 GTF2E1P29083 439 aaPredicted RBP9.25□□□□□ -0.93
NBR1-201ENST00000341165 ADD2P35612 726 aa9.25□□□□□ -0.93
NBR1-201ENST00000341165 ATP6V1AP38606 617 aa9.25□□□□□ -0.93
NBR1-201ENST00000341165 TRIM22Q8IYM9 498 aa9.25□□□□□ -0.93
NBR1-201ENST00000341165 STK11IPQ8N1F8 1099 aa9.25□□□□□ -0.93
NBR1-201ENST00000341165 ANGEL1Q9UNK9 670 aaKnown RBP9.25□□□□□ -0.93
NBR1-201ENST00000341165 CCDC196A0A1B0GTZ2 297 aa9.25□□□□□ -0.93
NBR1-201ENST00000341165 RDXP35241 583 aaKnown RBP9.25□□□□□ -0.93
NBR1-201ENST00000341165 AKAP17AQ02040 695 aaKnown RBP9.25□□□□□ -0.93
NBR1-201ENST00000341165 VPS37DQ86XT2 251 aa9.25□□□□□ -0.93
NBR1-201ENST00000341165 PIBF1Q8WXW3 757 aa9.25□□□□□ -0.93
NBR1-201ENST00000341165 ZBTB1Q9Y2K1 713 aa9.25□□□□□ -0.93
NBR1-201ENST00000341165 CARMIL3Q8ND23 1372 aa9.25□□□□□ -0.93
NBR1-201ENST00000341165 NEMFO60524 1076 aa9.25□□□□□ -0.93
NBR1-201ENST00000341165 CHST3Q7LGC8 479 aa9.25□□□□□ -0.93
NBR1-201ENST00000341165 TMTC2Q8N394 836 aa9.25□□□□□ -0.93
NBR1-201ENST00000341165 SPC24Q8NBT2 197 aa9.25□□□□□ -0.93
NBR1-201ENST00000341165 PRIMPOLQ96LW4 560 aa9.25□□□□□ -0.93
NBR1-201ENST00000341165 SPDYE4A6NLX3 237 aa9.24□□□□□ -0.93
NBR1-201ENST00000341165 GUCY1B3Q02153 619 aa9.24□□□□□ -0.93
NBR1-201ENST00000341165 CCDC102BQ68D86 513 aa9.24□□□□□ -0.93
NBR1-201ENST00000341165 TTLL5Q6EMB2 1281 aa9.24□□□□□ -0.93
NBR1-201ENST00000341165 TIGD1Q96MW7 591 aa9.24□□□□□ -0.93
NBR1-201ENST00000341165 NCOA5Q9HCD5 579 aaKnown RBP9.24□□□□□ -0.93
NBR1-201ENST00000341165 YEATS4O95619 227 aa9.24□□□□□ -0.93
NBR1-201ENST00000341165 XBP1P17861 261 aa9.24□□□□□ -0.93
NBR1-201ENST00000341165 NOLC1Q14978 699 aaKnown RBP eCLIP9.24□□□□□ -0.93
NBR1-201ENST00000341165 HLFQ16534 295 aa9.24□□□□□ -0.93
NBR1-201ENST00000341165 LRP2BPQ9P2M1 347 aa9.24□□□□□ -0.93
NBR1-201ENST00000341165 SLC12A7Q9Y666 1083 aa9.24□□□□□ -0.93
NBR1-201ENST00000341165 MRVI1Q9Y6F6 885 aa9.24□□□□□ -0.93
NBR1-201ENST00000341165 GOLGA8AA7E2F4 631 aa9.24□□□□□ -0.93
NBR1-201ENST00000341165 ZBTB43O43298 467 aa9.24□□□□□ -0.93
NBR1-201ENST00000341165 TMEM67Q5HYA8 995 aa9.24□□□□□ -0.93
NBR1-201ENST00000341165 SPATA5Q8NB90 893 aa9.24□□□□□ -0.93
NBR1-201ENST00000341165 SECISBP2LQ93073 1101 aaKnown RBP9.24□□□□□ -0.93
NBR1-201ENST00000341165 PSMD1Q99460 953 aa9.24□□□□□ -0.93
NBR1-201ENST00000341165 FUCA2Q9BTY2 467 aa9.24□□□□□ -0.93
NBR1-201ENST00000341165 RTEL1Q9NZ71 1219 aa9.24□□□□□ -0.93
NBR1-201ENST00000341165 CALCOCO1Q9P1Z2 691 aa9.24□□□□□ -0.93
NBR1-201ENST00000341165 ZNF532Q9HCE3 1301 aa9.24□□□□□ -0.93
NBR1-201ENST00000341165 NR1I2O75469 434 aa9.23□□□□□ -0.93
NBR1-201ENST00000341165 IARSP41252 1262 aaKnown RBP9.23□□□□□ -0.93
NBR1-201ENST00000341165 EVCP57679 992 aa9.23□□□□□ -0.93
NBR1-201ENST00000341165 MFSD6Q6ZSS7 791 aa9.23□□□□□ -0.93
NBR1-201ENST00000341165 PUS7LQ9H0K6 701 aaKnown RBP9.23□□□□□ -0.93
NBR1-201ENST00000341165 CBX8Q9HC52 389 aa9.23□□□□□ -0.93
NBR1-201ENST00000341165 STRCP1A6NGW2 1772 aa9.23□□□□□ -0.93
NBR1-201ENST00000341165 A0A1W2PQ27 194 aa9.23□□□□□ -0.93
NBR1-201ENST00000341165 A0A1W2PQ64 194 aa9.23□□□□□ -0.93
NBR1-201ENST00000341165 A0A1W2PQD8 194 aa9.23□□□□□ -0.93
NBR1-201ENST00000341165 FAM177BA6PVY3 158 aa9.23□□□□□ -0.93
NBR1-201ENST00000341165 SMTNL1A8MU46 457 aa9.23□□□□□ -0.93
NBR1-201ENST00000341165 ARID4AP29374 1257 aaPredicted RBP9.23□□□□□ -0.93
NBR1-201ENST00000341165 SSRP1Q08945 709 aaKnown RBP9.23□□□□□ -0.93
NBR1-201ENST00000341165 ADALQ6DHV7 355 aa9.23□□□□□ -0.93
NBR1-201ENST00000341165 MB21D2Q8IYB1 491 aaPredicted RBP9.23□□□□□ -0.93
NBR1-201ENST00000341165 ZMYM6O95789 1325 aa9.23□□□□□ -0.93
NBR1-201ENST00000341165 IFIT3O14879 490 aaKnown RBP9.23□□□□□ -0.93
NBR1-201ENST00000341165 SPTLC2O15270 562 aa9.23□□□□□ -0.93
NBR1-201ENST00000341165 PDE6AP16499 860 aa9.23□□□□□ -0.93
NBR1-201ENST00000341165 MCAMP43121 646 aa9.23□□□□□ -0.93
NBR1-201ENST00000341165 AXDND1Q5T1B0 1012 aaPredicted RBP9.23□□□□□ -0.93
NBR1-201ENST00000341165 BCL9O00512 1426 aa9.23□□□□□ -0.93
NBR1-201ENST00000341165 DYNC1I1O14576 645 aa9.23□□□□□ -0.93
NBR1-201ENST00000341165 DTNBO60941 627 aa9.23□□□□□ -0.93
NBR1-201ENST00000341165 ALX1Q15699 326 aa9.23□□□□□ -0.93
NBR1-201ENST00000341165 SKIDA1Q1XH10 827 aa9.23□□□□□ -0.93
NBR1-201ENST00000341165 CAVIN4Q5BKX8 364 aa9.23□□□□□ -0.93
NBR1-201ENST00000341165 TDRD7Q8NHU6 1098 aaKnown RBP9.23□□□□□ -0.93
NBR1-201ENST00000341165 ALG1Q9BT22 464 aa9.23□□□□□ -0.93
NBR1-201ENST00000341165 SMAP1Q8IYB5 467 aaPredicted RBP9.22□□□□□ -0.93
NBR1-201ENST00000341165 ZNF34Q8IZ26 560 aa9.22□□□□□ -0.93
NBR1-201ENST00000341165 FBXO18Q8NFZ0 1043 aa9.22□□□□□ -0.93
NBR1-201ENST00000341165 NOC3LQ8WTT2 800 aaKnown RBP9.22□□□□□ -0.93
NBR1-201ENST00000341165 USP28Q96RU2 1077 aa9.22□□□□□ -0.93
NBR1-201ENST00000341165 DNAJC25Q9H1X3 360 aa9.22□□□□□ -0.93
NBR1-201ENST00000341165 NIP7Q9Y221 180 aaKnown RBP eCLIP9.22□□□□□ -0.93
NBR1-201ENST00000341165 H0YHG0 523 aa9.22□□□□□ -0.93
NBR1-201ENST00000341165 RBM43Q6ZSC3 357 aaKnown RBP9.22□□□□□ -0.93
NBR1-201ENST00000341165 LUZP1Q86V48 1076 aa9.22□□□□□ -0.93
NBR1-201ENST00000341165 PDCL2Q8N4E4 241 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms