RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 HABP4Q5JVS0 413 aaKnown RBP14.55□□□□□ -0.08
CSMD2-202ENST00000338325 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.55□□□□□ -0.08
CSMD2-202ENST00000338325 CDAN1Q8IWY9 1227 aa14.55□□□□□ -0.08
CSMD2-202ENST00000338325 BRI3BPQ8WY22 251 aa14.55□□□□□ -0.08
CSMD2-202ENST00000338325 FAM84BQ96KN1 310 aaPredicted RBP14.55□□□□□ -0.08
CSMD2-202ENST00000338325 ZSWIM8A7E2V4 1837 aa14.54□□□□□ -0.08
CSMD2-202ENST00000338325 MYH13Q9UKX3 1938 aa14.54□□□□□ -0.08
CSMD2-202ENST00000338325 CCL15-CCL14A0A0B4J2E2 113 aa14.54□□□□□ -0.08
CSMD2-202ENST00000338325 TCP10L2B9ZVM9 353 aa14.54□□□□□ -0.08
CSMD2-202ENST00000338325 ALDH1L1O75891 902 aa14.54□□□□□ -0.08
CSMD2-202ENST00000338325 EN2P19622 333 aaPredicted RBP14.54□□□□□ -0.08
CSMD2-202ENST00000338325 CRKP46108 304 aa14.54□□□□□ -0.08
CSMD2-202ENST00000338325 GTF2A2P52657 109 aa14.54□□□□□ -0.08
CSMD2-202ENST00000338325 VGLL4Q14135 290 aa14.54□□□□□ -0.08
CSMD2-202ENST00000338325 ARHGEF6Q15052 776 aa14.54□□□□□ -0.08
CSMD2-202ENST00000338325 TAF1CQ15572 869 aaPredicted RBP14.54□□□□□ -0.08
CSMD2-202ENST00000338325 CCL15Q16663 113 aa14.54□□□□□ -0.08
CSMD2-202ENST00000338325 CNKSR2Q8WXI2 1034 aa14.54□□□□□ -0.08
CSMD2-202ENST00000338325 TMEM39BQ9GZU3 492 aa14.54□□□□□ -0.08
CSMD2-202ENST00000338325 ZFYVE28Q9HCC9 887 aa14.54□□□□□ -0.08
CSMD2-202ENST00000338325 BRCA2P51587 3418 aa14.53□□□□□ -0.08
CSMD2-202ENST00000338325 MAP3K9P80192 1104 aa14.53□□□□□ -0.08
CSMD2-202ENST00000338325 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.53□□□□□ -0.08
CSMD2-202ENST00000338325 ZNF333Q96JL9 665 aa14.53□□□□□ -0.08
CSMD2-202ENST00000338325 TMEM106CQ9BVX2 250 aa14.53□□□□□ -0.08
CSMD2-202ENST00000338325 SALL2Q9Y467 1007 aaPredicted RBP14.53□□□□□ -0.08
CSMD2-202ENST00000338325 CSADQ9Y600 493 aa14.53□□□□□ -0.08
CSMD2-202ENST00000338325 OTUD5Q96G74 571 aa14.52□□□□□ -0.08
CSMD2-202ENST00000338325 SUCLG2Q96I99 432 aa14.52□□□□□ -0.08
CSMD2-202ENST00000338325 PUS3Q9BZE2 481 aaKnown RBP14.52□□□□□ -0.08
CSMD2-202ENST00000338325 SRCIN1Q9C0H9 1055 aa14.52□□□□□ -0.08
CSMD2-202ENST00000338325 PTCH2Q9Y6C5 1203 aa14.52□□□□□ -0.08
CSMD2-202ENST00000338325 MROH5Q6ZUA9 1318 aa14.52□□□□□ -0.08
CSMD2-202ENST00000338325 SLC9C1Q4G0N8 1177 aa14.51□□□□□ -0.09
CSMD2-202ENST00000338325 SLC4A10Q6U841 1118 aa14.51□□□□□ -0.09
CSMD2-202ENST00000338325 NBPF11Q86T75 865 aa14.51□□□□□ -0.09
CSMD2-202ENST00000338325 VPS37DQ86XT2 251 aa14.51□□□□□ -0.09
CSMD2-202ENST00000338325 FAM43AQ8N2R8 423 aa14.51□□□□□ -0.09
CSMD2-202ENST00000338325 SPDYE5A6NIY4 337 aa14.51□□□□□ -0.09
CSMD2-202ENST00000338325 HDLBPQ00341 1268 aaKnown RBP14.51□□□□□ -0.09
CSMD2-202ENST00000338325 GRIK5Q16478 980 aa14.51□□□□□ -0.09
CSMD2-202ENST00000338325 FBXO33Q7Z6M2 555 aa14.51□□□□□ -0.09
CSMD2-202ENST00000338325 TBC1D22AQ8WUA7 517 aa14.51□□□□□ -0.09
CSMD2-202ENST00000338325 MRS2Q9HD23 443 aa14.51□□□□□ -0.09
CSMD2-202ENST00000338325 RIPOR2Q9Y4F9 1068 aa14.51□□□□□ -0.09
CSMD2-202ENST00000338325 WDHD1O75717 1129 aaPredicted RBP14.5□□□□□ -0.09
CSMD2-202ENST00000338325 CHAF1AQ13111 956 aaPredicted RBP14.5□□□□□ -0.09
CSMD2-202ENST00000338325 TEKT1Q969V4 418 aa14.5□□□□□ -0.09
CSMD2-202ENST00000338325 KAZALD1Q96I82 304 aa14.5□□□□□ -0.09
CSMD2-202ENST00000338325 SPINK5Q9NQ38 1064 aaPredicted RBP14.5□□□□□ -0.09
CSMD2-202ENST00000338325 IQSEC3Q9UPP2 1182 aaPredicted RBP14.5□□□□□ -0.09
CSMD2-202ENST00000338325 SNCAIPQ9Y6H5 919 aa14.5□□□□□ -0.09
CSMD2-202ENST00000338325 UTYO14607 1347 aa14.49□□□□□ -0.09
CSMD2-202ENST00000338325 FRAT2O75474 233 aaPredicted RBP14.49□□□□□ -0.09
CSMD2-202ENST00000338325 CETPP11597 493 aa14.49□□□□□ -0.09
CSMD2-202ENST00000338325 CACNB3P54284 484 aa14.49□□□□□ -0.09
CSMD2-202ENST00000338325 CAVIN4Q5BKX8 364 aa14.49□□□□□ -0.09
CSMD2-202ENST00000338325 ERO1BQ86YB8 467 aa14.49□□□□□ -0.09
CSMD2-202ENST00000338325 ZCCHC17Q9NP64 241 aaKnown RBP14.49□□□□□ -0.09
CSMD2-202ENST00000338325 TMOD2Q9NZR1 351 aa14.49□□□□□ -0.09
CSMD2-202ENST00000338325 RPAP1Q9BWH6 1393 aaPredicted RBP14.48□□□□□ -0.09
CSMD2-202ENST00000338325 TLR2O60603 784 aa14.48□□□□□ -0.09
CSMD2-202ENST00000338325 NBPF7P0C2Y1 421 aaPredicted RBP14.48□□□□□ -0.09
CSMD2-202ENST00000338325 KIF22Q14807 665 aa14.48□□□□□ -0.09
CSMD2-202ENST00000338325 SLC4A8Q2Y0W8 1093 aa14.48□□□□□ -0.09
CSMD2-202ENST00000338325 METTL24Q5JXM2 366 aa14.48□□□□□ -0.09
CSMD2-202ENST00000338325 FAM83AQ86UY5 434 aa14.48□□□□□ -0.09
CSMD2-202ENST00000338325 HOOK2Q96ED9 719 aa14.48□□□□□ -0.09
CSMD2-202ENST00000338325 WRNIP1Q96S55 665 aa14.48□□□□□ -0.09
CSMD2-202ENST00000338325 BICC1Q9H694 974 aaKnown RBP14.48□□□□□ -0.09
CSMD2-202ENST00000338325 MAST3O60307 1309 aa14.47□□□□□ -0.09
CSMD2-202ENST00000338325 PPIL2Q13356 520 aa14.47□□□□□ -0.09
CSMD2-202ENST00000338325 SNAPC2Q13487 334 aa14.47□□□□□ -0.09
CSMD2-202ENST00000338325 RABL6Q3YEC7 729 aaPredicted RBP14.47□□□□□ -0.09
CSMD2-202ENST00000338325 FKBP1CQ5VVH2 108 aa14.47□□□□□ -0.09
CSMD2-202ENST00000338325 ZDHHC15Q96MV8 337 aa14.47□□□□□ -0.09
CSMD2-202ENST00000338325 AK9Q5TCS8 1911 aa14.47□□□□□ -0.09
CSMD2-202ENST00000338325 BTBD19C9JJ37 291 aa14.46□□□□□ -0.09
CSMD2-202ENST00000338325 LACTBP83111 547 aaPredicted RBP14.46□□□□□ -0.09
CSMD2-202ENST00000338325 LRRC24Q50LG9 513 aa14.46□□□□□ -0.09
CSMD2-202ENST00000338325 VGLL2Q8N8G2 317 aa14.46□□□□□ -0.09
CSMD2-202ENST00000338325 ZKSCAN4Q969J2 545 aaPredicted RBP14.46□□□□□ -0.09
CSMD2-202ENST00000338325 MRIQ9BWK5 157 aa14.46□□□□□ -0.09
CSMD2-202ENST00000338325 ARHGAP39Q9C0H5 1083 aa14.46□□□□□ -0.09
CSMD2-202ENST00000338325 SUGT1Q9Y2Z0 365 aa14.46□□□□□ -0.09
CSMD2-202ENST00000338325 IRF6O14896 467 aa14.46□□□□□ -0.1
CSMD2-202ENST00000338325 PDE8BO95263 885 aa14.46□□□□□ -0.1
CSMD2-202ENST00000338325 GNRH1P01148 92 aa14.46□□□□□ -0.1
CSMD2-202ENST00000338325 FXR1P51114 621 aaKnown RBP eCLIP14.46□□□□□ -0.1
CSMD2-202ENST00000338325 DCAF15Q66K64 600 aa14.46□□□□□ -0.1
CSMD2-202ENST00000338325 ANKRD44Q8N8A2 993 aa14.46□□□□□ -0.1
CSMD2-202ENST00000338325 SH3TC2Q8TF17 1288 aa14.46□□□□□ -0.1
CSMD2-202ENST00000338325 KIF16BQ96L93 1317 aa14.45□□□□□ -0.1
CSMD2-202ENST00000338325 MYCP01106 439 aaPredicted RBP14.45□□□□□ -0.1
CSMD2-202ENST00000338325 BCAMP50895 628 aa14.45□□□□□ -0.1
CSMD2-202ENST00000338325 PRMT2P55345 433 aa14.45□□□□□ -0.1
CSMD2-202ENST00000338325 APOBEC3HQ6NTF7 200 aaKnown RBP14.45□□□□□ -0.1
CSMD2-202ENST00000338325 ZNF341Q9BYN7 854 aa14.45□□□□□ -0.1
CSMD2-202ENST00000338325 MGAMO43451 1857 aa14.44□□□□□ -0.1
CSMD2-202ENST00000338325 DOCK2Q92608 1830 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms