RNA–Protein interactions for RNA: ENST00000338145.7

UBE2D3-202, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 896 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-202ENST00000338145 GJA3Q9Y6H8 435 aa12.43□□□□□ -0.42
UBE2D3-202ENST00000338145 NRG2O14511 850 aaPredicted RBP12.42□□□□□ -0.42
UBE2D3-202ENST00000338145 MCCD1P59942 119 aaPredicted RBP12.42□□□□□ -0.42
UBE2D3-202ENST00000338145 GRM1Q13255 1194 aa12.42□□□□□ -0.42
UBE2D3-202ENST00000338145 WASHC4Q2M389 1173 aa12.42□□□□□ -0.42
UBE2D3-202ENST00000338145 CST9Q5W186 159 aa12.42□□□□□ -0.42
UBE2D3-202ENST00000338145 NIP7Q9Y221 180 aaKnown RBP eCLIP12.42□□□□□ -0.42
UBE2D3-202ENST00000338145 BTBD11A6QL63 1104 aa12.41□□□□□ -0.42
UBE2D3-202ENST00000338145 GTF2E1P29083 439 aaPredicted RBP12.41□□□□□ -0.42
UBE2D3-202ENST00000338145 SCNN1DP51172 638 aa12.41□□□□□ -0.42
UBE2D3-202ENST00000338145 OLFM4Q6UX06 510 aa12.41□□□□□ -0.42
UBE2D3-202ENST00000338145 ZBTB33Q86T24 672 aa12.41□□□□□ -0.42
UBE2D3-202ENST00000338145 CYP4X1Q8N118 509 aa12.41□□□□□ -0.42
UBE2D3-202ENST00000338145 CDK15Q96Q40 435 aa12.41□□□□□ -0.42
UBE2D3-202ENST00000338145 OCSTAMPQ9BR26 566 aa12.41□□□□□ -0.42
UBE2D3-202ENST00000338145 BCORQ6W2J9 1755 aa12.41□□□□□ -0.42
UBE2D3-202ENST00000338145 TNFRSF10AO00220 468 aa12.4□□□□□ -0.42
UBE2D3-202ENST00000338145 EPS15P42566 896 aa12.4□□□□□ -0.42
UBE2D3-202ENST00000338145 IRF5Q13568 498 aa12.4□□□□□ -0.42
UBE2D3-202ENST00000338145 SAPCD2Q86UD0 394 aa12.4□□□□□ -0.42
UBE2D3-202ENST00000338145 CCER1Q8TC90 406 aaPredicted RBP12.4□□□□□ -0.42
UBE2D3-202ENST00000338145 IRX2Q9BZI1 471 aaPredicted RBP12.4□□□□□ -0.42
UBE2D3-202ENST00000338145 NYXQ9GZU5 481 aa12.4□□□□□ -0.42
UBE2D3-202ENST00000338145 USP16Q9Y5T5 823 aa12.4□□□□□ -0.42
UBE2D3-202ENST00000338145 MAGEB6P1A0A0J9YX57 407 aa12.39□□□□□ -0.43
UBE2D3-202ENST00000338145 A6NJR5 290 aa12.39□□□□□ -0.43
UBE2D3-202ENST00000338145 SNRPA1P09661 255 aaKnown RBP12.39□□□□□ -0.43
UBE2D3-202ENST00000338145 FBXO45P0C2W1 286 aa12.39□□□□□ -0.43
UBE2D3-202ENST00000338145 DGKZQ13574 1117 aa12.39□□□□□ -0.43
UBE2D3-202ENST00000338145 CRY2Q49AN0 593 aa12.39□□□□□ -0.43
UBE2D3-202ENST00000338145 LARGE2Q8N3Y3 721 aa12.39□□□□□ -0.43
UBE2D3-202ENST00000338145 ADAM32Q8TC27 787 aa12.39□□□□□ -0.43
UBE2D3-202ENST00000338145 VPS33BQ9H267 617 aa12.39□□□□□ -0.43
UBE2D3-202ENST00000338145 ADARB2Q9NS39 739 aaKnown RBP12.39□□□□□ -0.43
UBE2D3-202ENST00000338145 CEMIPQ8WUJ3 1361 aa12.39□□□□□ -0.43
UBE2D3-202ENST00000338145 SNED1Q8TER0 1413 aa12.38□□□□□ -0.43
UBE2D3-202ENST00000338145 TRPM7Q96QT4 1865 aa12.38□□□□□ -0.43
UBE2D3-202ENST00000338145 AOC2O75106 756 aa12.38□□□□□ -0.43
UBE2D3-202ENST00000338145 TRAF5O00463 557 aa12.37□□□□□ -0.43
UBE2D3-202ENST00000338145 GFRA3O60609 400 aa12.37□□□□□ -0.43
UBE2D3-202ENST00000338145 CELF2O95319 508 aaKnown RBP12.37□□□□□ -0.43
UBE2D3-202ENST00000338145 HSPA5P11021 654 aaKnown RBP12.37□□□□□ -0.43
UBE2D3-202ENST00000338145 ABL2P42684 1182 aa12.37□□□□□ -0.43
UBE2D3-202ENST00000338145 FMR1Q06787 632 aaKnown RBP eCLIP12.37□□□□□ -0.43
UBE2D3-202ENST00000338145 NIM1KQ8IY84 436 aa12.37□□□□□ -0.43
UBE2D3-202ENST00000338145 RPGRQ92834 1020 aaKnown RBP12.37□□□□□ -0.43
UBE2D3-202ENST00000338145 SLC10A4Q96EP9 437 aa12.37□□□□□ -0.43
UBE2D3-202ENST00000338145 TMX4Q9H1E5 349 aaPredicted RBP12.37□□□□□ -0.43
UBE2D3-202ENST00000338145 GPRC5DQ9NZD1 345 aa12.37□□□□□ -0.43
UBE2D3-202ENST00000338145 KIF7Q2M1P5 1343 aa12.37□□□□□ -0.43
UBE2D3-202ENST00000338145 SIPA1L3O60292 1781 aaPredicted RBP12.36□□□□□ -0.43
UBE2D3-202ENST00000338145 TTC24A2A3L6 582 aaPredicted RBP12.36□□□□□ -0.43
UBE2D3-202ENST00000338145 FAM177BA6PVY3 158 aa12.36□□□□□ -0.43
UBE2D3-202ENST00000338145 HOXA10P31260 410 aaPredicted RBP12.36□□□□□ -0.43
UBE2D3-202ENST00000338145 NOGQ13253 232 aa12.36□□□□□ -0.43
UBE2D3-202ENST00000338145 PGAP2Q9UHJ9 254 aa12.36□□□□□ -0.43
UBE2D3-202ENST00000338145 LTBP1Q14766 1721 aa12.35□□□□□ -0.43
UBE2D3-202ENST00000338145 U2SURPO15042 1029 aaKnown RBP12.35□□□□□ -0.43
UBE2D3-202ENST00000338145 KCNQ3O43525 872 aa12.35□□□□□ -0.43
UBE2D3-202ENST00000338145 PIP4K2AP48426 406 aaPredicted RBP12.35□□□□□ -0.43
UBE2D3-202ENST00000338145 ERICH6Q7L0X2 663 aa12.35□□□□□ -0.43
UBE2D3-202ENST00000338145 POM121Q96HA1 1249 aa12.35□□□□□ -0.43
UBE2D3-202ENST00000338145 RBM17Q96I25 401 aaKnown RBP12.35□□□□□ -0.43
UBE2D3-202ENST00000338145 CRAMP1Q96RY5 1269 aa12.35□□□□□ -0.43
UBE2D3-202ENST00000338145 CDHR2Q9BYE9 1310 aa12.35□□□□□ -0.43
UBE2D3-202ENST00000338145 ERVV-1B6SEH8 477 aa12.34□□□□□ -0.43
UBE2D3-202ENST00000338145 SOX11P35716 441 aa12.34□□□□□ -0.43
UBE2D3-202ENST00000338145 NBPF20Q3BBV1 942 aa12.34□□□□□ -0.43
UBE2D3-202ENST00000338145 CIAPIN1Q6FI81 312 aa12.34□□□□□ -0.43
UBE2D3-202ENST00000338145 CDC37L1Q7L3B6 337 aa12.34□□□□□ -0.43
UBE2D3-202ENST00000338145 SUPT20HQ8NEM7 779 aa12.34□□□□□ -0.43
UBE2D3-202ENST00000338145 RIC1Q4ADV7 1423 aa12.34□□□□□ -0.43
UBE2D3-202ENST00000338145 PPIP5K2O43314 1243 aa12.33□□□□□ -0.44
UBE2D3-202ENST00000338145 DGAT1O75907 488 aa12.33□□□□□ -0.44
UBE2D3-202ENST00000338145 ADH1CP00326 375 aa12.33□□□□□ -0.44
UBE2D3-202ENST00000338145 HLFQ16534 295 aa12.33□□□□□ -0.44
UBE2D3-202ENST00000338145 NBPF10Q6P3W6 841 aaKnown RBP12.33□□□□□ -0.44
UBE2D3-202ENST00000338145 NBPF15Q8N660 670 aa12.33□□□□□ -0.44
UBE2D3-202ENST00000338145 RTF1Q92541 710 aaKnown RBP12.33□□□□□ -0.44
UBE2D3-202ENST00000338145 SAGE1Q9NXZ1 904 aa12.33□□□□□ -0.44
UBE2D3-202ENST00000338145 ZNRF3Q9ULT6 936 aa12.33□□□□□ -0.44
UBE2D3-202ENST00000338145 CASP8AP2Q9UKL3 1982 aa12.32□□□□□ -0.44
UBE2D3-202ENST00000338145 COL4A5P29400 1685 aa12.32□□□□□ -0.44
UBE2D3-202ENST00000338145 IBTKQ9P2D0 1353 aaPredicted RBP12.32□□□□□ -0.44
UBE2D3-202ENST00000338145 NPC1L1Q9UHC9 1359 aa12.32□□□□□ -0.44
UBE2D3-202ENST00000338145 PRAMEF22A3QJZ6 481 aa12.32□□□□□ -0.44
UBE2D3-202ENST00000338145 ALDH1A1P00352 501 aa12.32□□□□□ -0.44
UBE2D3-202ENST00000338145 NR5A1Q13285 461 aa12.32□□□□□ -0.44
UBE2D3-202ENST00000338145 GLIS2Q9BZE0 524 aaPredicted RBP12.32□□□□□ -0.44
UBE2D3-202ENST00000338145 SMPD1P17405 629 aa12.31□□□□□ -0.44
UBE2D3-202ENST00000338145 CXCL9Q07325 125 aa12.31□□□□□ -0.44
UBE2D3-202ENST00000338145 TNIP1Q15025 636 aa12.31□□□□□ -0.44
UBE2D3-202ENST00000338145 ZNF408Q9H9D4 720 aa12.31□□□□□ -0.44
UBE2D3-202ENST00000338145 ABCC12Q96J65 1359 aa12.3□□□□□ -0.44
UBE2D3-202ENST00000338145 HTATSF1O43719 755 aaKnown RBP12.3□□□□□ -0.44
UBE2D3-202ENST00000338145 GMPSP49915 693 aaPredicted RBP12.3□□□□□ -0.44
UBE2D3-202ENST00000338145 HUNKP57058 714 aa12.3□□□□□ -0.44
UBE2D3-202ENST00000338145 AOC3Q16853 763 aa12.3□□□□□ -0.44
UBE2D3-202ENST00000338145 CC2D1BQ5T0F9 858 aaKnown RBP12.3□□□□□ -0.44
UBE2D3-202ENST00000338145 VASH1Q7L8A9 365 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms