RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 CTU1Q7Z7A3 348 aaKnown RBP13.35□□□□□ -0.27
CAPN3-202ENST00000337571 TBC1D22AQ8WUA7 517 aa13.35□□□□□ -0.27
CAPN3-202ENST00000337571 USP44Q9H0E7 712 aa13.35□□□□□ -0.27
CAPN3-202ENST00000337571 HDAC5Q9UQL6 1122 aa13.35□□□□□ -0.27
CAPN3-202ENST00000337571 MANSC4A6NHS7 340 aaPredicted RBP13.34□□□□□ -0.27
CAPN3-202ENST00000337571 ALDH1A1P00352 501 aa13.34□□□□□ -0.27
CAPN3-202ENST00000337571 IFIT1P09914 478 aaKnown RBP13.34□□□□□ -0.27
CAPN3-202ENST00000337571 TNNI2P48788 182 aa13.34□□□□□ -0.27
CAPN3-202ENST00000337571 RGS19P49795 217 aa13.34□□□□□ -0.27
CAPN3-202ENST00000337571 CHAF1AQ13111 956 aaPredicted RBP13.34□□□□□ -0.27
CAPN3-202ENST00000337571 SPRYD7Q5W111 196 aa13.34□□□□□ -0.27
CAPN3-202ENST00000337571 FBXO33Q7Z6M2 555 aa13.34□□□□□ -0.27
CAPN3-202ENST00000337571 DZIP1LQ8IYY4 767 aaKnown RBP13.34□□□□□ -0.27
CAPN3-202ENST00000337571 ANKRD44Q8N8A2 993 aa13.34□□□□□ -0.27
CAPN3-202ENST00000337571 CDCA7LQ96GN5 454 aa13.34□□□□□ -0.27
CAPN3-202ENST00000337571 TDRD3Q9H7E2 651 aaKnown RBP13.34□□□□□ -0.27
CAPN3-202ENST00000337571 FZD1Q9UP38 647 aa13.34□□□□□ -0.27
CAPN3-202ENST00000337571 IQSEC3Q9UPP2 1182 aaPredicted RBP13.34□□□□□ -0.27
CAPN3-202ENST00000337571 CT47B1P0C2W7 299 aaPredicted RBP13.33□□□□□ -0.28
CAPN3-202ENST00000337571 ZBTB48P10074 688 aaPredicted RBP13.33□□□□□ -0.28
CAPN3-202ENST00000337571 PKN2Q16513 984 aaKnown RBP13.33□□□□□ -0.28
CAPN3-202ENST00000337571 MAP3K11Q16584 847 aa13.33□□□□□ -0.28
CAPN3-202ENST00000337571 NBPF12Q5TAG4 269 aaPredicted RBP13.33□□□□□ -0.28
CAPN3-202ENST00000337571 OTUD7BQ6GQQ9 843 aa13.33□□□□□ -0.28
CAPN3-202ENST00000337571 KLHDC4Q8TBB5 520 aa13.33□□□□□ -0.28
CAPN3-202ENST00000337571 ZNF70Q9UC06 446 aaPredicted RBP13.33□□□□□ -0.28
CAPN3-202ENST00000337571 GPR25O00155 361 aa13.32□□□□□ -0.28
CAPN3-202ENST00000337571 USP2O75604 605 aaPredicted RBP13.32□□□□□ -0.28
CAPN3-202ENST00000337571 UBTFL1P0CB47 393 aaPredicted RBP13.32□□□□□ -0.28
CAPN3-202ENST00000337571 CRKP46108 304 aa13.32□□□□□ -0.28
CAPN3-202ENST00000337571 PUM3Q15397 648 aaKnown RBP13.32□□□□□ -0.28
CAPN3-202ENST00000337571 ANKRD13AQ8IZ07 590 aa13.32□□□□□ -0.28
CAPN3-202ENST00000337571 ZNF296Q8WUU4 475 aaPredicted RBP13.32□□□□□ -0.28
CAPN3-202ENST00000337571 TEKT1Q969V4 418 aa13.32□□□□□ -0.28
CAPN3-202ENST00000337571 TCP10L2B9ZVM9 353 aa13.31□□□□□ -0.28
CAPN3-202ENST00000337571 EYA2O00167 538 aa13.31□□□□□ -0.28
CAPN3-202ENST00000337571 PRKAR2AP13861 404 aaKnown RBP13.31□□□□□ -0.28
CAPN3-202ENST00000337571 SLC5A1P13866 664 aa13.31□□□□□ -0.28
CAPN3-202ENST00000337571 BCAMP50895 628 aa13.31□□□□□ -0.28
CAPN3-202ENST00000337571 HDLBPQ00341 1268 aaKnown RBP13.31□□□□□ -0.28
CAPN3-202ENST00000337571 NOM1Q5C9Z4 860 aaKnown RBP13.31□□□□□ -0.28
CAPN3-202ENST00000337571 WNK4Q96J92 1243 aa13.31□□□□□ -0.28
CAPN3-202ENST00000337571 API5Q9BZZ5 524 aaKnown RBP13.31□□□□□ -0.28
CAPN3-202ENST00000337571 TMOD2Q9NZR1 351 aa13.31□□□□□ -0.28
CAPN3-202ENST00000337571 NOB1Q9ULX3 412 aaKnown RBP13.31□□□□□ -0.28
CAPN3-202ENST00000337571 CCER2I3L3R5 266 aa13.3□□□□□ -0.28
CAPN3-202ENST00000337571 FKTNO75072 461 aa13.3□□□□□ -0.28
CAPN3-202ENST00000337571 IFNL1Q8IU54 200 aa13.3□□□□□ -0.28
CAPN3-202ENST00000337571 TRMT2AQ8IZ69 625 aaKnown RBP13.3□□□□□ -0.28
CAPN3-202ENST00000337571 VGLL2Q8N8G2 317 aa13.3□□□□□ -0.28
CAPN3-202ENST00000337571 LPIN2Q92539 896 aa13.3□□□□□ -0.28
CAPN3-202ENST00000337571 CLMNQ96JQ2 1002 aa13.3□□□□□ -0.28
CAPN3-202ENST00000337571 MRIQ9BWK5 157 aa13.3□□□□□ -0.28
CAPN3-202ENST00000337571 GNL3LQ9NVN8 582 aaKnown RBP13.3□□□□□ -0.28
CAPN3-202ENST00000337571 SUGT1Q9Y2Z0 365 aa13.3□□□□□ -0.28
CAPN3-202ENST00000337571 MAST3O60307 1309 aa13.3□□□□□ -0.28
CAPN3-202ENST00000337571 WDR66Q8TBY9 1149 aa13.29□□□□□ -0.28
CAPN3-202ENST00000337571 HOOK2Q96ED9 719 aa13.29□□□□□ -0.28
CAPN3-202ENST00000337571 CFHR5Q9BXR6 569 aa13.29□□□□□ -0.28
CAPN3-202ENST00000337571 CEP126Q9P2H0 1117 aa13.29□□□□□ -0.28
CAPN3-202ENST00000337571 FBXO3Q9UK99 471 aa13.29□□□□□ -0.28
CAPN3-202ENST00000337571 AOX1Q06278 1338 aa13.29□□□□□ -0.28
CAPN3-202ENST00000337571 KIF16BQ96L93 1317 aa13.29□□□□□ -0.28
CAPN3-202ENST00000337571 MAP3K9P80192 1104 aa13.28□□□□□ -0.28
CAPN3-202ENST00000337571 ZDHHC15Q96MV8 337 aa13.28□□□□□ -0.28
CAPN3-202ENST00000337571 TMEM39BQ9GZU3 492 aa13.28□□□□□ -0.28
CAPN3-202ENST00000337571 SIL1Q9H173 461 aa13.28□□□□□ -0.28
CAPN3-202ENST00000337571 ELP3Q9H9T3 547 aa13.28□□□□□ -0.28
CAPN3-202ENST00000337571 HPS5Q9UPZ3 1129 aa13.28□□□□□ -0.28
CAPN3-202ENST00000337571 CSADQ9Y600 493 aa13.28□□□□□ -0.28
CAPN3-202ENST00000337571 ARAP2Q8WZ64 1704 aa13.27□□□□□ -0.28
CAPN3-202ENST00000337571 CIAO1O76071 339 aa13.27□□□□□ -0.29
CAPN3-202ENST00000337571 FGFR2P21802 821 aa13.27□□□□□ -0.29
CAPN3-202ENST00000337571 RFX5P48382 616 aaPredicted RBP13.27□□□□□ -0.29
CAPN3-202ENST00000337571 SOX10P56693 466 aa13.27□□□□□ -0.29
CAPN3-202ENST00000337571 GRIK5Q16478 980 aa13.27□□□□□ -0.29
CAPN3-202ENST00000337571 OPTNQ96CV9 577 aa13.27□□□□□ -0.29
CAPN3-202ENST00000337571 TNRC18O15417 2968 aaPredicted RBP13.27□□□□□ -0.29
CAPN3-202ENST00000337571 SSC5DA1L4H1 1573 aa13.27□□□□□ -0.29
CAPN3-202ENST00000337571 IPO8O15397 1037 aaKnown RBP13.26□□□□□ -0.29
CAPN3-202ENST00000337571 WDHD1O75717 1129 aaPredicted RBP13.26□□□□□ -0.29
CAPN3-202ENST00000337571 IL15P40933 162 aaPredicted RBP13.26□□□□□ -0.29
CAPN3-202ENST00000337571 ATP2B3Q16720 1220 aa13.26□□□□□ -0.29
CAPN3-202ENST00000337571 FBXO46Q6PJ61 603 aaPredicted RBP13.26□□□□□ -0.29
CAPN3-202ENST00000337571 HHIPL2Q6UWX4 724 aa13.26□□□□□ -0.29
CAPN3-202ENST00000337571 FAM83AQ86UY5 434 aa13.26□□□□□ -0.29
CAPN3-202ENST00000337571 TEPSINQ96N21 525 aa13.26□□□□□ -0.29
CAPN3-202ENST00000337571 MYH13Q9UKX3 1938 aa13.26□□□□□ -0.29
CAPN3-202ENST00000337571 LRRFIP2Q9Y608 721 aaKnown RBP13.26□□□□□ -0.29
CAPN3-202ENST00000337571 IGF2BP3O00425 579 aaKnown RBP eCLIP13.25□□□□□ -0.29
CAPN3-202ENST00000337571 GTF2A2P52657 109 aa13.25□□□□□ -0.29
CAPN3-202ENST00000337571 CACNB3P54284 484 aa13.25□□□□□ -0.29
CAPN3-202ENST00000337571 FKBP1CQ5VVH2 108 aa13.25□□□□□ -0.29
CAPN3-202ENST00000337571 ATG9AQ7Z3C6 839 aa13.25□□□□□ -0.29
CAPN3-202ENST00000337571 ARHGAP45Q92619 1136 aa13.25□□□□□ -0.29
CAPN3-202ENST00000337571 R3HDMLQ9H3Y0 253 aa13.25□□□□□ -0.29
CAPN3-202ENST00000337571 LDHBP07195 334 aaKnown RBP13.24□□□□□ -0.29
CAPN3-202ENST00000337571 GNAI3P08754 354 aa13.24□□□□□ -0.29
CAPN3-202ENST00000337571 RARSP54136 660 aaKnown RBP13.24□□□□□ -0.29
CAPN3-202ENST00000337571 ARHGEF6Q15052 776 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms