RNA–Protein interactions for RNA: ENST00000334731.6

C9orf85-201, Transcript of chromosome 9 open reading frame 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf85, Length 1,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-201ENST00000334731 TTF2Q9UNY4 1162 aaKnown RBP14.01□□□□□ -0.17
C9orf85-201ENST00000334731 IQSEC3Q9UPP2 1182 aaPredicted RBP14.01□□□□□ -0.17
C9orf85-201ENST00000334731 CLRN2A0PK11 232 aa14□□□□□ -0.17
C9orf85-201ENST00000334731 MYO1BO43795 1136 aa14□□□□□ -0.17
C9orf85-201ENST00000334731 CIAO1O76071 339 aa14□□□□□ -0.17
C9orf85-201ENST00000334731 IFIT1P09914 478 aaKnown RBP14□□□□□ -0.17
C9orf85-201ENST00000334731 TRIM27P14373 513 aa14□□□□□ -0.17
C9orf85-201ENST00000334731 RBM5P52756 815 aaKnown RBP eCLIP14□□□□□ -0.17
C9orf85-201ENST00000334731 TTLL12Q14166 644 aaPredicted RBP14□□□□□ -0.17
C9orf85-201ENST00000334731 GRIK5Q16478 980 aa14□□□□□ -0.17
C9orf85-201ENST00000334731 LPIN2Q92539 896 aa14□□□□□ -0.17
C9orf85-201ENST00000334731 CSRNP1Q96S65 589 aa14□□□□□ -0.17
C9orf85-201ENST00000334731 SIL1Q9H173 461 aa14□□□□□ -0.17
C9orf85-201ENST00000334731 SERPINA10Q9UK55 444 aa14□□□□□ -0.17
C9orf85-201ENST00000334731 FBXO3Q9UK99 471 aa14□□□□□ -0.17
C9orf85-201ENST00000334731 A0A1B0GUL6 1792 aa14□□□□□ -0.17
C9orf85-201ENST00000334731 FRAT2O75474 233 aaPredicted RBP13.99□□□□□ -0.17
C9orf85-201ENST00000334731 GNAI3P08754 354 aa13.99□□□□□ -0.17
C9orf85-201ENST00000334731 MNX1P50219 401 aaPredicted RBP13.99□□□□□ -0.17
C9orf85-201ENST00000334731 CHAF1AQ13111 956 aaPredicted RBP13.99□□□□□ -0.17
C9orf85-201ENST00000334731 ATF7IPQ6VMQ6 1270 aa13.99□□□□□ -0.17
C9orf85-201ENST00000334731 FRAT1Q92837 279 aaPredicted RBP13.99□□□□□ -0.17
C9orf85-201ENST00000334731 PA2G4Q9UQ80 394 aaKnown RBP13.99□□□□□ -0.17
C9orf85-201ENST00000334731 TNNQ9UQP3 1299 aa13.99□□□□□ -0.17
C9orf85-201ENST00000334731 SLC5A1P13866 664 aa13.98□□□□□ -0.17
C9orf85-201ENST00000334731 IL15P40933 162 aaPredicted RBP13.98□□□□□ -0.17
C9orf85-201ENST00000334731 CRKP46108 304 aa13.98□□□□□ -0.17
C9orf85-201ENST00000334731 PRKG1Q13976 671 aa13.98□□□□□ -0.17
C9orf85-201ENST00000334731 ARMC9Q7Z3E5 817 aa13.98□□□□□ -0.17
C9orf85-201ENST00000334731 TBC1D22AQ8WUA7 517 aa13.98□□□□□ -0.17
C9orf85-201ENST00000334731 VEZTQ9HBM0 779 aa13.98□□□□□ -0.17
C9orf85-201ENST00000334731 COPRSQ9NQ92 184 aa13.98□□□□□ -0.17
C9orf85-201ENST00000334731 RNF186Q9NXI6 227 aa13.98□□□□□ -0.17
C9orf85-201ENST00000334731 CEP126Q9P2H0 1117 aa13.98□□□□□ -0.17
C9orf85-201ENST00000334731 PPP2R3BQ9Y5P8 575 aa13.98□□□□□ -0.17
C9orf85-201ENST00000334731 HDLBPQ00341 1268 aaKnown RBP13.97□□□□□ -0.17
C9orf85-201ENST00000334731 RASA3Q14644 834 aa13.97□□□□□ -0.17
C9orf85-201ENST00000334731 LDLRAD1Q5T700 205 aa13.97□□□□□ -0.17
C9orf85-201ENST00000334731 DZIP1LQ8IYY4 767 aaKnown RBP13.97□□□□□ -0.17
C9orf85-201ENST00000334731 ZNF70Q9UC06 446 aaPredicted RBP13.97□□□□□ -0.17
C9orf85-201ENST00000334731 ANGEL1Q9UNK9 670 aaKnown RBP13.97□□□□□ -0.17
C9orf85-201ENST00000334731 FZD1Q9UP38 647 aa13.97□□□□□ -0.17
C9orf85-201ENST00000334731 PAPPA2Q9BXP8 1791 aa13.96□□□□□ -0.17
C9orf85-201ENST00000334731 COL1A1P02452 1464 aaPredicted RBP13.96□□□□□ -0.17
C9orf85-201ENST00000334731 TRPA1O75762 1119 aa13.96□□□□□ -0.17
C9orf85-201ENST00000334731 MTX1Q13505 466 aa13.96□□□□□ -0.17
C9orf85-201ENST00000334731 SUPT20HL1Q3ZLR7 823 aa13.96□□□□□ -0.17
C9orf85-201ENST00000334731 NBPF12Q5TAG4 269 aaPredicted RBP13.96□□□□□ -0.17
C9orf85-201ENST00000334731 CLUAP1Q96AJ1 413 aa13.96□□□□□ -0.17
C9orf85-201ENST00000334731 MRIQ9BWK5 157 aa13.96□□□□□ -0.17
C9orf85-201ENST00000334731 TDRD3Q9H7E2 651 aaKnown RBP13.96□□□□□ -0.17
C9orf85-201ENST00000334731 SAGE1Q9NXZ1 904 aa13.96□□□□□ -0.17
C9orf85-201ENST00000334731 SRGAP3O43295 1099 aa13.95□□□□□ -0.18
C9orf85-201ENST00000334731 MAP3K11Q16584 847 aa13.95□□□□□ -0.18
C9orf85-201ENST00000334731 ATP2B3Q16720 1220 aa13.95□□□□□ -0.18
C9orf85-201ENST00000334731 ZKSCAN2Q63HK3 967 aa13.95□□□□□ -0.18
C9orf85-201ENST00000334731 SUGT1Q9Y2Z0 365 aa13.95□□□□□ -0.18
C9orf85-201ENST00000334731 PPP1R12BO60237 982 aaPredicted RBP13.94□□□□□ -0.18
C9orf85-201ENST00000334731 GNAI2P04899 355 aa13.94□□□□□ -0.18
C9orf85-201ENST00000334731 TNFAIP1Q13829 316 aa13.94□□□□□ -0.18
C9orf85-201ENST00000334731 TMEM57Q8N5G2 664 aa13.94□□□□□ -0.18
C9orf85-201ENST00000334731 WDR66Q8TBY9 1149 aa13.94□□□□□ -0.18
C9orf85-201ENST00000334731 TEKT1Q969V4 418 aa13.94□□□□□ -0.18
C9orf85-201ENST00000334731 SSC5DA1L4H1 1573 aa13.93□□□□□ -0.18
C9orf85-201ENST00000334731 TCP10L2B9ZVM9 353 aa13.93□□□□□ -0.18
C9orf85-201ENST00000334731 USP2O75604 605 aaPredicted RBP13.93□□□□□ -0.18
C9orf85-201ENST00000334731 TM4SF4P48230 202 aa13.93□□□□□ -0.18
C9orf85-201ENST00000334731 MKRN3Q13064 507 aaKnown RBP13.93□□□□□ -0.18
C9orf85-201ENST00000334731 APOBEC3HQ6NTF7 200 aaKnown RBP13.93□□□□□ -0.18
C9orf85-201ENST00000334731 SLC10A4Q96EP9 437 aa13.93□□□□□ -0.18
C9orf85-201ENST00000334731 ABHD8Q96I13 439 aa13.93□□□□□ -0.18
C9orf85-201ENST00000334731 ZDHHC15Q96MV8 337 aa13.93□□□□□ -0.18
C9orf85-201ENST00000334731 TEPSINQ96N21 525 aa13.93□□□□□ -0.18
C9orf85-201ENST00000334731 GNL3LQ9NVN8 582 aaKnown RBP13.93□□□□□ -0.18
C9orf85-201ENST00000334731 ZBED9Q6R2W3 1325 aa13.92□□□□□ -0.18
C9orf85-201ENST00000334731 UNCXA6NJT0 531 aa13.92□□□□□ -0.18
C9orf85-201ENST00000334731 ADORA1P30542 326 aa13.92□□□□□ -0.18
C9orf85-201ENST00000334731 PHKA1P46020 1223 aa13.92□□□□□ -0.18
C9orf85-201ENST00000334731 TIMM10P62072 90 aa13.92□□□□□ -0.18
C9orf85-201ENST00000334731 SPRYD7Q5W111 196 aa13.92□□□□□ -0.18
C9orf85-201ENST00000334731 HHIPL2Q6UWX4 724 aa13.92□□□□□ -0.18
C9orf85-201ENST00000334731 CDAN1Q8IWY9 1227 aa13.92□□□□□ -0.18
C9orf85-201ENST00000334731 CLMNQ96JQ2 1002 aa13.92□□□□□ -0.18
C9orf85-201ENST00000334731 MAST3O60307 1309 aa13.91□□□□□ -0.18
C9orf85-201ENST00000334731 PNMA6EA0A0J9YXQ4 647 aa13.91□□□□□ -0.18
C9orf85-201ENST00000334731 TNNI2P48788 182 aa13.91□□□□□ -0.18
C9orf85-201ENST00000334731 TFCP2Q12800 502 aa13.91□□□□□ -0.18
C9orf85-201ENST00000334731 CCDC102BQ68D86 513 aa13.91□□□□□ -0.18
C9orf85-201ENST00000334731 ZNF579Q8NAF0 562 aaKnown RBP13.91□□□□□ -0.18
C9orf85-201ENST00000334731 TMEM39BQ9GZU3 492 aa13.91□□□□□ -0.18
C9orf85-201ENST00000334731 DENND2AQ9ULE3 1009 aa13.91□□□□□ -0.18
C9orf85-201ENST00000334731 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.91□□□□□ -0.18
C9orf85-201ENST00000334731 SEMA3EO15041 775 aa13.9□□□□□ -0.18
C9orf85-201ENST00000334731 IREB2P48200 963 aaKnown RBP13.9□□□□□ -0.18
C9orf85-201ENST00000334731 CACNB3P54284 484 aa13.9□□□□□ -0.18
C9orf85-201ENST00000334731 MCOLN1Q9GZU1 580 aa13.9□□□□□ -0.18
C9orf85-201ENST00000334731 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.9□□□□□ -0.18
C9orf85-201ENST00000334731 AKAP2Q9Y2D5 859 aa13.9□□□□□ -0.18
C9orf85-201ENST00000334731 SALL1Q9NSC2 1324 aa13.9□□□□□ -0.19
C9orf85-201ENST00000334731 A0A1B0GUL7 405 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms