RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 TMEM87BQ96K49 555 aa17.16■□□□□ 0.34
C9orf47-201ENST00000334490 SLC27A2O14975 620 aa17.16■□□□□ 0.34
C9orf47-201ENST00000334490 RBM28Q9NW13 759 aaKnown RBP17.16■□□□□ 0.34
C9orf47-201ENST00000334490 USP8P40818 1118 aa17.16■□□□□ 0.34
C9orf47-201ENST00000334490 GYG1P46976 350 aa17.16■□□□□ 0.34
C9orf47-201ENST00000334490 PRKG1Q13976 671 aa17.16■□□□□ 0.34
C9orf47-201ENST00000334490 ZYXQ15942 572 aaKnown RBP17.16■□□□□ 0.34
C9orf47-201ENST00000334490 TRIM47Q96LD4 638 aa17.16■□□□□ 0.34
C9orf47-201ENST00000334490 SPTLC2O15270 562 aa17.16■□□□□ 0.34
C9orf47-201ENST00000334490 ATP5JP18859 108 aa17.16■□□□□ 0.34
C9orf47-201ENST00000334490 EDC3Q96F86 508 aaKnown RBP17.16■□□□□ 0.34
C9orf47-201ENST00000334490 ARHGEF10LQ9HCE6 1279 aa17.16■□□□□ 0.34
C9orf47-201ENST00000334490 KIF24Q5T7B8 1368 aa17.15■□□□□ 0.34
C9orf47-201ENST00000334490 KRT79Q5XKE5 535 aa17.15■□□□□ 0.34
C9orf47-201ENST00000334490 CLIP2Q9UDT6 1046 aa17.15■□□□□ 0.34
C9orf47-201ENST00000334490 SEC24BO95487 1268 aa17.15■□□□□ 0.34
C9orf47-201ENST00000334490 RMND1Q9NWS8 449 aa17.15■□□□□ 0.34
C9orf47-201ENST00000334490 TTF2Q9UNY4 1162 aaKnown RBP17.15■□□□□ 0.34
C9orf47-201ENST00000334490 GIMAP6Q6P9H5 292 aa17.15■□□□□ 0.34
C9orf47-201ENST00000334490 PRAMEF22A3QJZ6 481 aa17.14■□□□□ 0.34
C9orf47-201ENST00000334490 CETN2P41208 172 aa17.14■□□□□ 0.34
C9orf47-201ENST00000334490 GPR162Q16538 588 aa17.14■□□□□ 0.34
C9orf47-201ENST00000334490 TGFBRAP1Q8WUH2 860 aa17.14■□□□□ 0.34
C9orf47-201ENST00000334490 CNKSR1Q969H4 720 aa17.14■□□□□ 0.34
C9orf47-201ENST00000334490 NEBLO76041 1014 aa17.14■□□□□ 0.33
C9orf47-201ENST00000334490 RRAGBQ5VZM2 374 aa17.14■□□□□ 0.33
C9orf47-201ENST00000334490 ANGEL1Q9UNK9 670 aaKnown RBP17.14■□□□□ 0.33
C9orf47-201ENST00000334490 RPS6KB1P23443 525 aa17.14■□□□□ 0.33
C9orf47-201ENST00000334490 TMEM87AQ8NBN3 555 aa17.14■□□□□ 0.33
C9orf47-201ENST00000334490 EAF2Q96CJ1 260 aaPredicted RBP17.14■□□□□ 0.33
C9orf47-201ENST00000334490 MCM7P33993 719 aa17.14■□□□□ 0.33
C9orf47-201ENST00000334490 ASIC1P78348 528 aa17.14■□□□□ 0.33
C9orf47-201ENST00000334490 LRRC24Q50LG9 513 aa17.14■□□□□ 0.33
C9orf47-201ENST00000334490 USP48Q86UV5 1035 aa17.14■□□□□ 0.33
C9orf47-201ENST00000334490 FAM114A1Q8IWE2 563 aa17.14■□□□□ 0.33
C9orf47-201ENST00000334490 TET3O43151 1660 aa17.14■□□□□ 0.33
C9orf47-201ENST00000334490 SHROOM2Q13796 1616 aa17.13■□□□□ 0.33
C9orf47-201ENST00000334490 ATP2B4P23634 1241 aa17.13■□□□□ 0.33
C9orf47-201ENST00000334490 KLHL40Q2TBA0 621 aa17.13■□□□□ 0.33
C9orf47-201ENST00000334490 CCDC174Q6PII3 467 aa17.13■□□□□ 0.33
C9orf47-201ENST00000334490 PIGBQ92521 554 aa17.13■□□□□ 0.33
C9orf47-201ENST00000334490 GREM2Q9H772 168 aa17.13■□□□□ 0.33
C9orf47-201ENST00000334490 TMOD4Q9NZQ9 345 aa17.13■□□□□ 0.33
C9orf47-201ENST00000334490 ADGRL3Q9HAR2 1447 aa17.13■□□□□ 0.33
C9orf47-201ENST00000334490 H7C1D1 291 aa17.13■□□□□ 0.33
C9orf47-201ENST00000334490 YEATS4O95619 227 aa17.13■□□□□ 0.33
C9orf47-201ENST00000334490 DHX58Q96C10 678 aa17.13■□□□□ 0.33
C9orf47-201ENST00000334490 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.13■□□□□ 0.33
C9orf47-201ENST00000334490 BCAMP50895 628 aa17.13■□□□□ 0.33
C9orf47-201ENST00000334490 DACT1Q9NYF0 836 aa17.13■□□□□ 0.33
C9orf47-201ENST00000334490 SP4Q02446 784 aa17.12■□□□□ 0.33
C9orf47-201ENST00000334490 CTDSPL2Q05D32 466 aa17.12■□□□□ 0.33
C9orf47-201ENST00000334490 TEKT1Q969V4 418 aa17.12■□□□□ 0.33
C9orf47-201ENST00000334490 HOOK2Q96ED9 719 aa17.12■□□□□ 0.33
C9orf47-201ENST00000334490 CHRNDQ07001 517 aa17.12■□□□□ 0.33
C9orf47-201ENST00000334490 DOK7Q18PE1 504 aa17.12■□□□□ 0.33
C9orf47-201ENST00000334490 FCHSD1Q86WN1 690 aa17.12■□□□□ 0.33
C9orf47-201ENST00000334490 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.12■□□□□ 0.33
C9orf47-201ENST00000334490 N4BP3O15049 544 aa17.12■□□□□ 0.33
C9orf47-201ENST00000334490 CDC42BPAQ5VT25 1732 aa17.12■□□□□ 0.33
C9orf47-201ENST00000334490 JAKMIP3Q5VZ66 844 aa17.12■□□□□ 0.33
C9orf47-201ENST00000334490 TCHPQ9BT92 498 aa17.12■□□□□ 0.33
C9orf47-201ENST00000334490 USP40Q9NVE5 1235 aa17.12■□□□□ 0.33
C9orf47-201ENST00000334490 ZSCAN12O43309 604 aa17.11■□□□□ 0.33
C9orf47-201ENST00000334490 CAVIN2O95810 425 aa17.11■□□□□ 0.33
C9orf47-201ENST00000334490 ZNF771Q7L3S4 317 aaPredicted RBP17.11■□□□□ 0.33
C9orf47-201ENST00000334490 V9GY48 417 aaPredicted RBP17.11■□□□□ 0.33
C9orf47-201ENST00000334490 SLC1A4P43007 532 aa17.11■□□□□ 0.33
C9orf47-201ENST00000334490 INTS4Q96HW7 963 aaKnown RBP17.11■□□□□ 0.33
C9orf47-201ENST00000334490 THRAP3Q9Y2W1 955 aaKnown RBP17.11■□□□□ 0.33
C9orf47-201ENST00000334490 SERPINB2P05120 415 aa17.11■□□□□ 0.33
C9orf47-201ENST00000334490 BRAPQ7Z569 592 aa17.11■□□□□ 0.33
C9orf47-201ENST00000334490 MMRN2Q9H8L6 949 aa17.11■□□□□ 0.33
C9orf47-201ENST00000334490 SNX14Q9Y5W7 946 aa17.11■□□□□ 0.33
C9orf47-201ENST00000334490 IBTKQ9P2D0 1353 aaPredicted RBP17.11■□□□□ 0.33
C9orf47-201ENST00000334490 ESPNB1AK53 854 aa17.1■□□□□ 0.33
C9orf47-201ENST00000334490 KIAA0825Q8IV33 1275 aa17.1■□□□□ 0.33
C9orf47-201ENST00000334490 IQCEQ6IPM2 695 aa17.1■□□□□ 0.33
C9orf47-201ENST00000334490 DTHD1Q6ZMT9 781 aa17.1■□□□□ 0.33
C9orf47-201ENST00000334490 TMC6Q7Z403 805 aa17.1■□□□□ 0.33
C9orf47-201ENST00000334490 ZBTB21Q9ULJ3 1066 aa17.1■□□□□ 0.33
C9orf47-201ENST00000334490 LETM2Q2VYF4 491 aa17.1■□□□□ 0.33
C9orf47-201ENST00000334490 BACH1O14867 736 aa17.1■□□□□ 0.33
C9orf47-201ENST00000334490 ARHGAP27Q6ZUM4 889 aa17.1■□□□□ 0.33
C9orf47-201ENST00000334490 NCOA5Q9HCD5 579 aaKnown RBP17.1■□□□□ 0.33
C9orf47-201ENST00000334490 NEFHP12036 1026 aa17.09■□□□□ 0.33
C9orf47-201ENST00000334490 AXDND1Q5T1B0 1012 aaPredicted RBP17.09■□□□□ 0.33
C9orf47-201ENST00000334490 PATL2C9JE40 543 aaKnown RBP17.09■□□□□ 0.33
C9orf47-201ENST00000334490 USP17L12C9JPN9 530 aa17.09■□□□□ 0.33
C9orf47-201ENST00000334490 USP17L21D6R901 530 aa17.09■□□□□ 0.33
C9orf47-201ENST00000334490 PSMA7O14818 248 aa17.09■□□□□ 0.33
C9orf47-201ENST00000334490 DEXIO95424 95 aa17.09■□□□□ 0.33
C9orf47-201ENST00000334490 TFAP4Q01664 338 aa17.09■□□□□ 0.33
C9orf47-201ENST00000334490 ADCY10Q96PN6 1610 aa17.09■□□□□ 0.33
C9orf47-201ENST00000334490 PDE8BO95263 885 aa17.09■□□□□ 0.33
C9orf47-201ENST00000334490 SYT1P21579 422 aa17.09■□□□□ 0.33
C9orf47-201ENST00000334490 USO1O60763 962 aaKnown RBP17.08■□□□□ 0.33
C9orf47-201ENST00000334490 EAPPQ56P03 285 aaPredicted RBP17.08■□□□□ 0.33
C9orf47-201ENST00000334490 HSP90AA4PQ58FG1 418 aa17.08■□□□□ 0.33
C9orf47-201ENST00000334490 PUS3Q9BZE2 481 aaKnown RBP17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms