RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 XIRP1Q702N8 1843 aaKnown RBP13.77□□□□□ -0.21
HDAC6-201ENST00000334136 PLCG2P16885 1265 aa13.77□□□□□ -0.21
HDAC6-201ENST00000334136 NMIQ13287 307 aaPredicted RBP13.77□□□□□ -0.21
HDAC6-201ENST00000334136 DBNLQ9UJU6 430 aaKnown RBP13.77□□□□□ -0.21
HDAC6-201ENST00000334136 RABL6Q3YEC7 729 aaPredicted RBP13.76□□□□□ -0.21
HDAC6-201ENST00000334136 MPHOSPH10O00566 681 aaKnown RBP13.76□□□□□ -0.21
HDAC6-201ENST00000334136 HLA-DOAP06340 250 aa13.76□□□□□ -0.21
HDAC6-201ENST00000334136 KRT85P78386 507 aa13.76□□□□□ -0.21
HDAC6-201ENST00000334136 RAB3GAP1Q15042 981 aa13.76□□□□□ -0.21
HDAC6-201ENST00000334136 SLC4A8Q2Y0W8 1093 aa13.76□□□□□ -0.21
HDAC6-201ENST00000334136 ZNF444Q8N0Y2 327 aaPredicted RBP13.76□□□□□ -0.21
HDAC6-201ENST00000334136 SNAP23O00161 211 aa13.76□□□□□ -0.21
HDAC6-201ENST00000334136 PICALMQ13492 652 aa13.76□□□□□ -0.21
HDAC6-201ENST00000334136 TTLL12Q14166 644 aaPredicted RBP13.76□□□□□ -0.21
HDAC6-201ENST00000334136 KBTBD3Q8NAB2 608 aa13.76□□□□□ -0.21
HDAC6-201ENST00000334136 RANBP6O60518 1105 aaKnown RBP13.75□□□□□ -0.21
HDAC6-201ENST00000334136 PDCP20941 246 aa13.75□□□□□ -0.21
HDAC6-201ENST00000334136 HAND2P61296 217 aa13.75□□□□□ -0.21
HDAC6-201ENST00000334136 CCDC83Q8IWF9 413 aa13.75□□□□□ -0.21
HDAC6-201ENST00000334136 RGPD2P0DJD1 1756 aa13.75□□□□□ -0.21
HDAC6-201ENST00000334136 AOX1Q06278 1338 aa13.75□□□□□ -0.21
HDAC6-201ENST00000334136 KINO60870 393 aaKnown RBP13.75□□□□□ -0.21
HDAC6-201ENST00000334136 EDC3Q96F86 508 aaKnown RBP13.75□□□□□ -0.21
HDAC6-201ENST00000334136 CRAMP1Q96RY5 1269 aa13.75□□□□□ -0.21
HDAC6-201ENST00000334136 RNF41Q9H4P4 317 aaPredicted RBP13.75□□□□□ -0.21
HDAC6-201ENST00000334136 MAST3O60307 1309 aa13.75□□□□□ -0.21
HDAC6-201ENST00000334136 SMC2O95347 1197 aa13.75□□□□□ -0.21
HDAC6-201ENST00000334136 TEX35Q5T0J7 233 aa13.75□□□□□ -0.21
HDAC6-201ENST00000334136 DBNDD1Q9H9R9 158 aa13.75□□□□□ -0.21
HDAC6-201ENST00000334136 CSF1RP07333 972 aa13.75□□□□□ -0.21
HDAC6-201ENST00000334136 ESYT1Q9BSJ8 1104 aa13.75□□□□□ -0.21
HDAC6-201ENST00000334136 ADCY5O95622 1261 aa13.74□□□□□ -0.21
HDAC6-201ENST00000334136 TTC12Q9H892 705 aaPredicted RBP13.74□□□□□ -0.21
HDAC6-201ENST00000334136 ERICH4A6NGS2 130 aa13.74□□□□□ -0.21
HDAC6-201ENST00000334136 RASSF8Q8NHQ8 419 aa13.74□□□□□ -0.21
HDAC6-201ENST00000334136 SNX21Q969T3 373 aa13.74□□□□□ -0.21
HDAC6-201ENST00000334136 TLR7Q9NYK1 1049 aaKnown RBP13.74□□□□□ -0.21
HDAC6-201ENST00000334136 CASTP20810 708 aaKnown RBP13.74□□□□□ -0.21
HDAC6-201ENST00000334136 DPY19L2Q6NUT2 758 aa13.74□□□□□ -0.21
HDAC6-201ENST00000334136 GPR101Q96P66 508 aaPredicted RBP13.74□□□□□ -0.21
HDAC6-201ENST00000334136 NUP62CLQ9H1M0 184 aa13.74□□□□□ -0.21
HDAC6-201ENST00000334136 TAOK3Q9H2K8 898 aa13.74□□□□□ -0.21
HDAC6-201ENST00000334136 TTF2Q9UNY4 1162 aaKnown RBP13.74□□□□□ -0.21
HDAC6-201ENST00000334136 TRIM29Q14134 588 aa13.73□□□□□ -0.21
HDAC6-201ENST00000334136 CKAP2LQ8IYA6 745 aa13.73□□□□□ -0.21
HDAC6-201ENST00000334136 C16orf45Q96MC5 204 aaPredicted RBP13.73□□□□□ -0.21
HDAC6-201ENST00000334136 CCDC69A6NI79 296 aa13.73□□□□□ -0.21
HDAC6-201ENST00000334136 RGL2O15211 777 aa13.73□□□□□ -0.21
HDAC6-201ENST00000334136 MBD4O95243 580 aa13.73□□□□□ -0.21
HDAC6-201ENST00000334136 CHMLP26374 656 aa13.73□□□□□ -0.21
HDAC6-201ENST00000334136 SP8Q8IXZ3 490 aa13.73□□□□□ -0.21
HDAC6-201ENST00000334136 CCDC34Q96HJ3 373 aa13.73□□□□□ -0.21
HDAC6-201ENST00000334136 CAMKK2Q96RR4 588 aa13.73□□□□□ -0.21
HDAC6-201ENST00000334136 PXDNLA1KZ92 1463 aa13.73□□□□□ -0.21
HDAC6-201ENST00000334136 PPP4R3BQ5MIZ7 849 aa13.73□□□□□ -0.21
HDAC6-201ENST00000334136 KIAA0825Q8IV33 1275 aa13.73□□□□□ -0.21
HDAC6-201ENST00000334136 TEX11Q8IYF3 940 aa13.73□□□□□ -0.21
HDAC6-201ENST00000334136 FAM177A1Q8N128 213 aaPredicted RBP13.73□□□□□ -0.21
HDAC6-201ENST00000334136 ZKSCAN5Q9Y2L8 839 aa13.73□□□□□ -0.21
HDAC6-201ENST00000334136 GNAT2P19087 354 aa13.72□□□□□ -0.21
HDAC6-201ENST00000334136 PDE4BQ07343 736 aa13.72□□□□□ -0.21
HDAC6-201ENST00000334136 SLC10A5Q5PT55 438 aa13.72□□□□□ -0.21
HDAC6-201ENST00000334136 PDILTQ8N807 584 aa13.72□□□□□ -0.21
HDAC6-201ENST00000334136 APPBP2Q92624 585 aa13.72□□□□□ -0.21
HDAC6-201ENST00000334136 TMX3Q96JJ7 454 aa13.72□□□□□ -0.21
HDAC6-201ENST00000334136 OFD1O75665 1012 aa13.72□□□□□ -0.21
HDAC6-201ENST00000334136 ANKRD1Q15327 319 aa13.72□□□□□ -0.21
HDAC6-201ENST00000334136 LRSAM1Q6UWE0 723 aa13.72□□□□□ -0.21
HDAC6-201ENST00000334136 IQCA1Q86XH1 822 aa13.72□□□□□ -0.21
HDAC6-201ENST00000334136 NUP133Q8WUM0 1156 aa13.72□□□□□ -0.21
HDAC6-201ENST00000334136 ARGLU1Q9NWB6 273 aaPredicted RBP13.72□□□□□ -0.21
HDAC6-201ENST00000334136 MCM9Q9NXL9 1143 aa13.72□□□□□ -0.21
HDAC6-201ENST00000334136 H7C1D1 291 aa13.72□□□□□ -0.21
HDAC6-201ENST00000334136 IGSF3O75054 1194 aa13.72□□□□□ -0.21
HDAC6-201ENST00000334136 DPEP1P16444 411 aa13.72□□□□□ -0.21
HDAC6-201ENST00000334136 SPATA32Q96LK8 384 aa13.72□□□□□ -0.21
HDAC6-201ENST00000334136 PDRG1Q9NUG6 133 aa13.72□□□□□ -0.21
HDAC6-201ENST00000334136 CCDC183Q5T5S1 534 aa13.72□□□□□ -0.21
HDAC6-201ENST00000334136 UTYO14607 1347 aa13.71□□□□□ -0.21
HDAC6-201ENST00000334136 DYNC1I1O14576 645 aa13.71□□□□□ -0.21
HDAC6-201ENST00000334136 SEMA3EO15041 775 aa13.71□□□□□ -0.21
HDAC6-201ENST00000334136 DLGAP5Q15398 846 aa13.71□□□□□ -0.21
HDAC6-201ENST00000334136 MFSD6Q6ZSS7 791 aa13.71□□□□□ -0.21
HDAC6-201ENST00000334136 RGS17Q9UGC6 210 aaPredicted RBP13.71□□□□□ -0.21
HDAC6-201ENST00000334136 RGS12O14924 1447 aa13.71□□□□□ -0.21
HDAC6-201ENST00000334136 GIMAP6Q6P9H5 292 aa13.71□□□□□ -0.21
HDAC6-201ENST00000334136 HAUS7Q99871 368 aa13.71□□□□□ -0.21
HDAC6-201ENST00000334136 POLRMTO00411 1230 aaKnown RBP13.71□□□□□ -0.22
HDAC6-201ENST00000334136 RAD17O75943 681 aa13.71□□□□□ -0.22
HDAC6-201ENST00000334136 GPS2Q13227 327 aa13.71□□□□□ -0.22
HDAC6-201ENST00000334136 TNIP1Q15025 636 aa13.71□□□□□ -0.22
HDAC6-201ENST00000334136 GRIPAP1Q4V328 841 aa13.71□□□□□ -0.22
HDAC6-201ENST00000334136 DDX11Q96FC9 970 aa13.71□□□□□ -0.22
HDAC6-201ENST00000334136 HELLSQ9NRZ9 838 aa13.71□□□□□ -0.22
HDAC6-201ENST00000334136 RIPOR2Q9Y4F9 1068 aa13.71□□□□□ -0.22
HDAC6-201ENST00000334136 RBM8AQ9Y5S9 174 aaKnown RBP13.71□□□□□ -0.22
HDAC6-201ENST00000334136 PNPLA7Q6ZV29 1317 aa13.7□□□□□ -0.22
HDAC6-201ENST00000334136 ZNF532Q9HCE3 1301 aa13.7□□□□□ -0.22
HDAC6-201ENST00000334136 DDR1Q08345 913 aa13.7□□□□□ -0.22
HDAC6-201ENST00000334136 MAP3K11Q16584 847 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms