RNA–Protein interactions for RNA: ENST00000332728.8

LYSMD4-201, Transcript of LysM domain containing 4, humanhuman

TSL 4 BASIC

Gene LYSMD4, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-201ENST00000332728 LCORLQ8N3X6 602 aa21.31■■□□□ 1
LYSMD4-201ENST00000332728 DNAJC25Q9H1X3 360 aa21.31■■□□□ 1
LYSMD4-201ENST00000332728 EPB41L4AQ9HCS5 686 aaPredicted RBP21.31■■□□□ 1
LYSMD4-201ENST00000332728 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.31■■□□□ 1
LYSMD4-201ENST00000332728 CARMIL3Q8ND23 1372 aa21.31■■□□□ 1
LYSMD4-201ENST00000332728 KLRK1P26718 216 aa21.3■■□□□ 1
LYSMD4-201ENST00000332728 DOT1LQ8TEK3 1739 aa21.3■■□□□ 1
LYSMD4-201ENST00000332728 MINDY4BA8MYZ0 360 aa21.3■■□□□ 1
LYSMD4-201ENST00000332728 LRRFIP1Q32MZ4 808 aaKnown RBP21.3■■□□□ 1
LYSMD4-201ENST00000332728 CCAR1Q8IX12 1150 aaKnown RBP21.3■■□□□ 1
LYSMD4-201ENST00000332728 CYP2D7A0A087X1C5 515 aa21.29■■□□□ 1
LYSMD4-201ENST00000332728 NTSR2O95665 410 aa21.29■■□□□ 1
LYSMD4-201ENST00000332728 EVX2Q03828 476 aa21.29■■□□□ 1
LYSMD4-201ENST00000332728 FUCA2Q9BTY2 467 aa21.29■■□□□ 1
LYSMD4-201ENST00000332728 R3HCC1Q9Y3T6 440 aaKnown RBP21.29■■□□□ 1
LYSMD4-201ENST00000332728 COL16A1Q07092 1604 aaPredicted RBP21.29■■□□□ 1
LYSMD4-201ENST00000332728 TAF1P21675 1872 aa21.29■■□□□ 1
LYSMD4-201ENST00000332728 MYH14Q7Z406 1995 aaKnown RBP21.29■■□□□ 1
LYSMD4-201ENST00000332728 NPHP1O15259 732 aa21.29■■□□□ 1
LYSMD4-201ENST00000332728 CCDC152Q4G0S7 254 aa21.29■■□□□ 1
LYSMD4-201ENST00000332728 ADGRA1Q86SQ6 560 aa21.29■■□□□ 1
LYSMD4-201ENST00000332728 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.29■■□□□ 1
LYSMD4-201ENST00000332728 C8orf76Q96K31 380 aa21.29■■□□□ 1
LYSMD4-201ENST00000332728 NAPBQ9H115 298 aa21.29■■□□□ 1
LYSMD4-201ENST00000332728 CLIC4Q9Y696 253 aa21.29■■□□□ 1
LYSMD4-201ENST00000332728 COL4A1P02462 1669 aa21.29■■□□□ 1
LYSMD4-201ENST00000332728 A0A1B0GVL5 298 aa21.28■■□□□ 1
LYSMD4-201ENST00000332728 TFCP2L1Q9NZI6 479 aa21.28■■□□□ 1
LYSMD4-201ENST00000332728 RAI14Q9P0K7 980 aa21.28■■□□□ 1
LYSMD4-201ENST00000332728 MRVI1Q9Y6F6 885 aa21.28■■□□□ 1
LYSMD4-201ENST00000332728 LRP6O75581 1613 aa21.28■■□□□ 1
LYSMD4-201ENST00000332728 SPATA31A5Q5VU36 1347 aa21.28■■□□□ 1
LYSMD4-201ENST00000332728 SPATA31A7Q8IWB4 1347 aa21.28■■□□□ 1
LYSMD4-201ENST00000332728 KIF28PB7ZC32 967 aa21.28■■□□□ 1
LYSMD4-201ENST00000332728 CCDC192P0DO97 292 aa21.28■■□□□ 1
LYSMD4-201ENST00000332728 CDC27P30260 824 aa21.28■■□□□ 1
LYSMD4-201ENST00000332728 TDO2P48775 406 aa21.28■■□□□ 1
LYSMD4-201ENST00000332728 ISM2Q6H9L7 571 aa21.28■■□□□ 1
LYSMD4-201ENST00000332728 STRBPQ96SI9 672 aaKnown RBP21.28■■□□□ 1
LYSMD4-201ENST00000332728 FGFR2P21802 821 aa21.28■■□□□ 1
LYSMD4-201ENST00000332728 CELF1Q92879 486 aaKnown RBP21.28■■□□□ 1
LYSMD4-201ENST00000332728 SLC4A4Q9Y6R1 1079 aa21.28■■□□□ 1
LYSMD4-201ENST00000332728 MARCKSP29966 332 aaPredicted RBP21.27■■□□□ 1
LYSMD4-201ENST00000332728 TBC1D9BQ66K14 1250 aa21.27■■□□□ 1
LYSMD4-201ENST00000332728 PRDM1O75626 825 aa21.27■□□□□ 0.99
LYSMD4-201ENST00000332728 FBXO3Q9UK99 471 aa21.27■□□□□ 0.99
LYSMD4-201ENST00000332728 NWD2Q9ULI1 1742 aa21.26■□□□□ 0.99
LYSMD4-201ENST00000332728 hCG_1642624A0A1W2PR95 340 aa21.26■□□□□ 0.99
LYSMD4-201ENST00000332728 TCRBV5S4A2TA0A5A2 114 aa21.26■□□□□ 0.99
LYSMD4-201ENST00000332728 UBAP1LF5GYI3 381 aa21.26■□□□□ 0.99
LYSMD4-201ENST00000332728 IFNL3Q8IZI9 196 aa21.26■□□□□ 0.99
LYSMD4-201ENST00000332728 NOL7Q9UMY1 257 aaKnown RBP21.26■□□□□ 0.99
LYSMD4-201ENST00000332728 MAP3K12Q12852 859 aa21.26■□□□□ 0.99
LYSMD4-201ENST00000332728 VPS37DQ86XT2 251 aa21.26■□□□□ 0.99
LYSMD4-201ENST00000332728 ZNF274Q96GC6 653 aaPredicted RBP21.26■□□□□ 0.99
LYSMD4-201ENST00000332728 ZKSCAN5Q9Y2L8 839 aa21.26■□□□□ 0.99
LYSMD4-201ENST00000332728 MROH5Q6ZUA9 1318 aa21.25■□□□□ 0.99
LYSMD4-201ENST00000332728 CHAF1AQ13111 956 aaPredicted RBP21.25■□□□□ 0.99
LYSMD4-201ENST00000332728 SF3A1Q15459 793 aaKnown RBP21.25■□□□□ 0.99
LYSMD4-201ENST00000332728 TMEM67Q5HYA8 995 aa21.25■□□□□ 0.99
LYSMD4-201ENST00000332728 FSIP1Q8NA03 581 aa21.25■□□□□ 0.99
LYSMD4-201ENST00000332728 AGXT2Q9BYV1 514 aa21.25■□□□□ 0.99
LYSMD4-201ENST00000332728 ATP2B1P20020 1258 aa21.25■□□□□ 0.99
LYSMD4-201ENST00000332728 CYP7A1P22680 504 aa21.25■□□□□ 0.99
LYSMD4-201ENST00000332728 ARID4AP29374 1257 aaPredicted RBP21.25■□□□□ 0.99
LYSMD4-201ENST00000332728 METAP2P50579 478 aaKnown RBP eCLIP21.25■□□□□ 0.99
LYSMD4-201ENST00000332728 DYNLL1P63167 89 aaKnown RBP21.25■□□□□ 0.99
LYSMD4-201ENST00000332728 HMGN5P82970 282 aaKnown RBP21.25■□□□□ 0.99
LYSMD4-201ENST00000332728 TTF1Q15361 905 aaPredicted RBP21.25■□□□□ 0.99
LYSMD4-201ENST00000332728 ZSWIM5Q9P217 1185 aa21.25■□□□□ 0.99
LYSMD4-201ENST00000332728 CCDC39Q9UFE4 941 aa21.25■□□□□ 0.99
LYSMD4-201ENST00000332728 COL14A1Q05707 1796 aaKnown RBP21.25■□□□□ 0.99
LYSMD4-201ENST00000332728 AKAP11Q9UKA4 1901 aa21.25■□□□□ 0.99
LYSMD4-201ENST00000332728 ZSCAN25Q6NSZ9 544 aa21.24■□□□□ 0.99
LYSMD4-201ENST00000332728 BCL11BQ9C0K0 894 aaPredicted RBP21.24■□□□□ 0.99
LYSMD4-201ENST00000332728 CBX8Q9HC52 389 aa21.24■□□□□ 0.99
LYSMD4-201ENST00000332728 IFIT3O14879 490 aaKnown RBP21.24■□□□□ 0.99
LYSMD4-201ENST00000332728 GNPATO15228 680 aa21.24■□□□□ 0.99
LYSMD4-201ENST00000332728 NUP133Q8WUM0 1156 aa21.24■□□□□ 0.99
LYSMD4-201ENST00000332728 BIN1O00499 593 aa21.24■□□□□ 0.99
LYSMD4-201ENST00000332728 UQCRFS1P1P0C7P4 283 aa21.24■□□□□ 0.99
LYSMD4-201ENST00000332728 PIBF1Q8WXW3 757 aa21.24■□□□□ 0.99
LYSMD4-201ENST00000332728 GPR101Q96P66 508 aaPredicted RBP21.24■□□□□ 0.99
LYSMD4-201ENST00000332728 LLPHQ9BRT6 129 aaKnown RBP21.24■□□□□ 0.99
LYSMD4-201ENST00000332728 CFAP45Q9UL16 551 aa21.24■□□□□ 0.99
LYSMD4-201ENST00000332728 UTRNP46939 3433 aa21.23■□□□□ 0.99
LYSMD4-201ENST00000332728 LETM1O95202 739 aaPredicted RBP21.23■□□□□ 0.99
LYSMD4-201ENST00000332728 SASS6Q6UVJ0 657 aa21.23■□□□□ 0.99
LYSMD4-201ENST00000332728 ZSCAN16Q9H4T2 348 aaPredicted RBP21.23■□□□□ 0.99
LYSMD4-201ENST00000332728 SALL1Q9NSC2 1324 aa21.23■□□□□ 0.99
LYSMD4-201ENST00000332728 DNTTIP2Q5QJE6 756 aaKnown RBP21.23■□□□□ 0.99
LYSMD4-201ENST00000332728 DRC7Q8IY82 874 aa21.23■□□□□ 0.99
LYSMD4-201ENST00000332728 ANGEL1Q9UNK9 670 aaKnown RBP21.23■□□□□ 0.99
LYSMD4-201ENST00000332728 GSG1L2A8MUP6 293 aa21.22■□□□□ 0.99
LYSMD4-201ENST00000332728 GNL2Q13823 731 aaKnown RBP21.22■□□□□ 0.99
LYSMD4-201ENST00000332728 STK38Q15208 465 aa21.22■□□□□ 0.99
LYSMD4-201ENST00000332728 UBE3CQ15386 1083 aa21.22■□□□□ 0.99
LYSMD4-201ENST00000332728 ARID3AQ99856 593 aa21.22■□□□□ 0.99
LYSMD4-201ENST00000332728 CLSTN2Q9H4D0 955 aa21.22■□□□□ 0.99
LYSMD4-201ENST00000332728 ELP1O95163 1332 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms