RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 ANTXR1Q9H6X2 564 aa19.55■□□□□ 0.72
LRRC28-202ENST00000331450 RRAGCQ9HB90 399 aa19.55■□□□□ 0.72
LRRC28-202ENST00000331450 ABCF2Q9UG63 623 aa19.55■□□□□ 0.72
LRRC28-202ENST00000331450 TTF2Q9UNY4 1162 aaKnown RBP19.55■□□□□ 0.72
LRRC28-202ENST00000331450 MAST3O60307 1309 aa19.54■□□□□ 0.72
LRRC28-202ENST00000331450 F8W031 263 aaPredicted RBP19.54■□□□□ 0.72
LRRC28-202ENST00000331450 EGFRP00533 1210 aa19.54■□□□□ 0.72
LRRC28-202ENST00000331450 LDHBP07195 334 aaKnown RBP19.54■□□□□ 0.72
LRRC28-202ENST00000331450 EPHX2P34913 555 aa19.54■□□□□ 0.72
LRRC28-202ENST00000331450 HDLBPQ00341 1268 aaKnown RBP19.54■□□□□ 0.72
LRRC28-202ENST00000331450 SPTY2D1Q68D10 685 aaPredicted RBP19.54■□□□□ 0.72
LRRC28-202ENST00000331450 ZNF384Q8TF68 577 aa19.54■□□□□ 0.72
LRRC28-202ENST00000331450 EDC3Q96F86 508 aaKnown RBP19.54■□□□□ 0.72
LRRC28-202ENST00000331450 DNAJC2Q99543 621 aaKnown RBP19.54■□□□□ 0.72
LRRC28-202ENST00000331450 GPBP1L1Q9HC44 474 aaPredicted RBP19.54■□□□□ 0.72
LRRC28-202ENST00000331450 ADARB2Q9NS39 739 aaKnown RBP19.54■□□□□ 0.72
LRRC28-202ENST00000331450 PAG1Q9NWQ8 432 aa19.54■□□□□ 0.72
LRRC28-202ENST00000331450 FOCADQ5VW36 1801 aa19.53■□□□□ 0.72
LRRC28-202ENST00000331450 H7C1D1 291 aa19.53■□□□□ 0.72
LRRC28-202ENST00000331450 IGSF3O75054 1194 aa19.53■□□□□ 0.72
LRRC28-202ENST00000331450 OGFOD1Q8N543 542 aa19.53■□□□□ 0.72
LRRC28-202ENST00000331450 TRPM4Q8TD43 1214 aa19.53■□□□□ 0.72
LRRC28-202ENST00000331450 ZBED3Q96IU2 234 aaPredicted RBP19.53■□□□□ 0.72
LRRC28-202ENST00000331450 MYOZ2Q9NPC6 264 aa19.53■□□□□ 0.72
LRRC28-202ENST00000331450 SERPINA10Q9UK55 444 aa19.53■□□□□ 0.72
LRRC28-202ENST00000331450 HDAC9Q9UKV0 1011 aa19.53■□□□□ 0.72
LRRC28-202ENST00000331450 GOLIM4O00461 696 aa19.52■□□□□ 0.72
LRRC28-202ENST00000331450 TTF1Q15361 905 aaPredicted RBP19.52■□□□□ 0.72
LRRC28-202ENST00000331450 ERICH6Q7L0X2 663 aa19.52■□□□□ 0.72
LRRC28-202ENST00000331450 SAMD7Q7Z3H4 446 aa19.52■□□□□ 0.72
LRRC28-202ENST00000331450 MTMR14Q8NCE2 650 aa19.52■□□□□ 0.72
LRRC28-202ENST00000331450 MRIQ9BWK5 157 aa19.52■□□□□ 0.72
LRRC28-202ENST00000331450 KIF3CO14782 793 aa19.51■□□□□ 0.71
LRRC28-202ENST00000331450 HIRAP54198 1017 aaPredicted RBP19.51■□□□□ 0.71
LRRC28-202ENST00000331450 MECOMQ03112 1051 aa19.51■□□□□ 0.71
LRRC28-202ENST00000331450 KIF4BQ2VIQ3 1234 aa19.51■□□□□ 0.71
LRRC28-202ENST00000331450 USP50Q70EL3 339 aaPredicted RBP19.51■□□□□ 0.71
LRRC28-202ENST00000331450 NSUN4Q96CB9 384 aaKnown RBP19.51■□□□□ 0.71
LRRC28-202ENST00000331450 LRP2BPQ9P2M1 347 aa19.51■□□□□ 0.71
LRRC28-202ENST00000331450 GAKO14976 1311 aa19.51■□□□□ 0.71
LRRC28-202ENST00000331450 CRKP46108 304 aa19.5■□□□□ 0.71
LRRC28-202ENST00000331450 DIXDC1Q155Q3 683 aa19.5■□□□□ 0.71
LRRC28-202ENST00000331450 TBC1D10BQ4KMP7 808 aaPredicted RBP19.5■□□□□ 0.71
LRRC28-202ENST00000331450 HHIPL2Q6UWX4 724 aa19.5■□□□□ 0.71
LRRC28-202ENST00000331450 DZIP1Q86YF9 867 aaKnown RBP19.5■□□□□ 0.71
LRRC28-202ENST00000331450 PCDHAC2Q9Y5I4 1007 aa19.5■□□□□ 0.71
LRRC28-202ENST00000331450 POLR2AP24928 1970 aaKnown RBP19.5■□□□□ 0.71
LRRC28-202ENST00000331450 CFAP100Q494V2 611 aa19.49■□□□□ 0.71
LRRC28-202ENST00000331450 PNMA8AQ86V59 439 aaPredicted RBP19.49■□□□□ 0.71
LRRC28-202ENST00000331450 SKAP1Q86WV1 359 aa19.49■□□□□ 0.71
LRRC28-202ENST00000331450 TEKT1Q969V4 418 aa19.49■□□□□ 0.71
LRRC28-202ENST00000331450 FAM163AQ96GL9 167 aaPredicted RBP19.49■□□□□ 0.71
LRRC28-202ENST00000331450 ZDHHC15Q96MV8 337 aa19.49■□□□□ 0.71
LRRC28-202ENST00000331450 RAI14Q9P0K7 980 aa19.49■□□□□ 0.71
LRRC28-202ENST00000331450 DAGLAQ9Y4D2 1042 aa19.49■□□□□ 0.71
LRRC28-202ENST00000331450 MROH7-TTC4A0A0A0MT08 1334 aa19.49■□□□□ 0.71
LRRC28-202ENST00000331450 SPDYE2BA6NHP3 402 aa19.48■□□□□ 0.71
LRRC28-202ENST00000331450 WNT10BO00744 389 aa19.48■□□□□ 0.71
LRRC28-202ENST00000331450 IDH1O75874 414 aaKnown RBP19.48■□□□□ 0.71
LRRC28-202ENST00000331450 SPDYE6P0CI01 402 aa19.48■□□□□ 0.71
LRRC28-202ENST00000331450 TMED8Q6PL24 325 aaPredicted RBP19.48■□□□□ 0.71
LRRC28-202ENST00000331450 KBTBD3Q8NAB2 608 aa19.48■□□□□ 0.71
LRRC28-202ENST00000331450 MAP4K4O95819 1239 aaPredicted RBP19.47■□□□□ 0.71
LRRC28-202ENST00000331450 POTEIP0CG38 1075 aa19.47■□□□□ 0.71
LRRC28-202ENST00000331450 POTEJP0CG39 1038 aa19.47■□□□□ 0.71
LRRC28-202ENST00000331450 MAP3K12Q12852 859 aa19.47■□□□□ 0.71
LRRC28-202ENST00000331450 DLGAP5Q15398 846 aa19.47■□□□□ 0.71
LRRC28-202ENST00000331450 NBPF9Q3BBW0 867 aa19.47■□□□□ 0.71
LRRC28-202ENST00000331450 TTC22Q5TAA0 569 aa19.47■□□□□ 0.71
LRRC28-202ENST00000331450 PGAP2Q9UHJ9 254 aa19.47■□□□□ 0.71
LRRC28-202ENST00000331450 GSPT1P15170 499 aaKnown RBP19.46■□□□□ 0.71
LRRC28-202ENST00000331450 GSTO1P78417 241 aa19.46■□□□□ 0.71
LRRC28-202ENST00000331450 RBM26Q5T8P6 1007 aaKnown RBP19.46■□□□□ 0.71
LRRC28-202ENST00000331450 NAA16Q6N069 864 aaPredicted RBP19.46■□□□□ 0.71
LRRC28-202ENST00000331450 APOBEC3HQ6NTF7 200 aaKnown RBP19.46■□□□□ 0.71
LRRC28-202ENST00000331450 ADGRA1Q86SQ6 560 aa19.46■□□□□ 0.71
LRRC28-202ENST00000331450 SLF2Q8IX21 1173 aa19.46■□□□□ 0.71
LRRC28-202ENST00000331450 PRMT6Q96LA8 375 aaPredicted RBP19.46■□□□□ 0.71
LRRC28-202ENST00000331450 ASTN2O75129 1339 aaPredicted RBP19.46■□□□□ 0.71
LRRC28-202ENST00000331450 RFX7Q2KHR2 1363 aa19.45■□□□□ 0.7
LRRC28-202ENST00000331450 DDX60LQ5H9U9 1706 aaKnown RBP19.45■□□□□ 0.7
LRRC28-202ENST00000331450 TCRBV5S4A2TA0A5A2 114 aa19.45■□□□□ 0.7
LRRC28-202ENST00000331450 PDE6AP16499 860 aa19.45■□□□□ 0.7
LRRC28-202ENST00000331450 LDHDQ86WU2 507 aa19.45■□□□□ 0.7
LRRC28-202ENST00000331450 MAGEB6Q8N7X4 407 aa19.45■□□□□ 0.7
LRRC28-202ENST00000331450 ZC3H15Q8WU90 426 aaKnown RBP19.45■□□□□ 0.7
LRRC28-202ENST00000331450 EVI5LQ96CN4 794 aa19.45■□□□□ 0.7
LRRC28-202ENST00000331450 GPR75-ASB3A0A0A6YYF3 556 aa19.44■□□□□ 0.7
LRRC28-202ENST00000331450 LDHCP07864 332 aa19.44■□□□□ 0.7
LRRC28-202ENST00000331450 ADD2P35612 726 aa19.44■□□□□ 0.7
LRRC28-202ENST00000331450 RBM5P52756 815 aaKnown RBP eCLIP19.44■□□□□ 0.7
LRRC28-202ENST00000331450 EAPPQ56P03 285 aaPredicted RBP19.44■□□□□ 0.7
LRRC28-202ENST00000331450 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.44■□□□□ 0.7
LRRC28-202ENST00000331450 PITPNM2Q9BZ72 1349 aa19.44■□□□□ 0.7
LRRC28-202ENST00000331450 CHGBP05060 677 aa19.43■□□□□ 0.7
LRRC28-202ENST00000331450 SPDYE2Q495Y8 402 aa19.43■□□□□ 0.7
LRRC28-202ENST00000331450 SLC9C2Q5TAH2 1124 aa19.43■□□□□ 0.7
LRRC28-202ENST00000331450 GGA3Q9NZ52 723 aa19.43■□□□□ 0.7
LRRC28-202ENST00000331450 ZNF532Q9HCE3 1301 aa19.43■□□□□ 0.7
LRRC28-202ENST00000331450 NAV1Q8NEY1 1877 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms