RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 ANO1Q5XXA6 986 aa16.68■□□□□ 0.26
SNX20-202ENST00000330943 ANKRD13DQ6ZTN6 518 aa16.68■□□□□ 0.26
SNX20-202ENST00000330943 TMX1Q9H3N1 280 aa16.68■□□□□ 0.26
SNX20-202ENST00000330943 TMEM232C9JQI7 657 aa16.67■□□□□ 0.26
SNX20-202ENST00000330943 CBFA2T2O43439 604 aa16.67■□□□□ 0.26
SNX20-202ENST00000330943 TOP1P11387 765 aaKnown RBP16.67■□□□□ 0.26
SNX20-202ENST00000330943 MYL5Q02045 173 aa16.67■□□□□ 0.26
SNX20-202ENST00000330943 GNL2Q13823 731 aaKnown RBP16.67■□□□□ 0.26
SNX20-202ENST00000330943 ZNF790Q6PG37 636 aa16.67■□□□□ 0.26
SNX20-202ENST00000330943 BRAPQ7Z569 592 aa16.67■□□□□ 0.26
SNX20-202ENST00000330943 ZCCHC17Q9NP64 241 aaKnown RBP16.67■□□□□ 0.26
SNX20-202ENST00000330943 GOLGA8BA8MQT2 603 aa16.67■□□□□ 0.26
SNX20-202ENST00000330943 SASH3O75995 380 aa16.67■□□□□ 0.26
SNX20-202ENST00000330943 CMA1P23946 247 aa16.67■□□□□ 0.26
SNX20-202ENST00000330943 HAND2P61296 217 aa16.67■□□□□ 0.26
SNX20-202ENST00000330943 TIMM10P62072 90 aa16.67■□□□□ 0.26
SNX20-202ENST00000330943 ST5P78524 1137 aa16.67■□□□□ 0.26
SNX20-202ENST00000330943 MAPK8IP2Q13387 824 aaPredicted RBP16.67■□□□□ 0.26
SNX20-202ENST00000330943 RABL6Q3YEC7 729 aaPredicted RBP16.67■□□□□ 0.26
SNX20-202ENST00000330943 KCNH5Q8NCM2 988 aa16.67■□□□□ 0.26
SNX20-202ENST00000330943 CCDC34Q96HJ3 373 aa16.67■□□□□ 0.26
SNX20-202ENST00000330943 A0A087WZG4 1122 aa16.66■□□□□ 0.26
SNX20-202ENST00000330943 KLF18A0A0U1RQI7 1052 aa16.66■□□□□ 0.26
SNX20-202ENST00000330943 ZSCAN12O43309 604 aa16.66■□□□□ 0.26
SNX20-202ENST00000330943 WDHD1O75717 1129 aaPredicted RBP16.66■□□□□ 0.26
SNX20-202ENST00000330943 TPM1P09493 284 aa16.66■□□□□ 0.26
SNX20-202ENST00000330943 OAS2P29728 719 aaKnown RBP16.66■□□□□ 0.26
SNX20-202ENST00000330943 SYKP43405 635 aa16.66■□□□□ 0.26
SNX20-202ENST00000330943 VWA3AA6NCI4 1184 aa16.66■□□□□ 0.26
SNX20-202ENST00000330943 CPLX1O14810 134 aa16.66■□□□□ 0.26
SNX20-202ENST00000330943 TBC1D8O95759 1140 aa16.66■□□□□ 0.26
SNX20-202ENST00000330943 LMBR1LQ6UX01 489 aa16.66■□□□□ 0.26
SNX20-202ENST00000330943 VSTM4Q8IW00 320 aa16.66■□□□□ 0.26
SNX20-202ENST00000330943 PPP2R2CQ9Y2T4 447 aa16.66■□□□□ 0.26
SNX20-202ENST00000330943 PNOCQ13519 176 aa16.66■□□□□ 0.26
SNX20-202ENST00000330943 CC2D1AQ6P1N0 951 aaPredicted RBP16.66■□□□□ 0.26
SNX20-202ENST00000330943 ANKRD24Q8TF21 1146 aa16.66■□□□□ 0.26
SNX20-202ENST00000330943 SMARCE1Q969G3 411 aa16.66■□□□□ 0.26
SNX20-202ENST00000330943 M0R2C6 588 aa16.65■□□□□ 0.26
SNX20-202ENST00000330943 GNG11P61952 73 aa16.65■□□□□ 0.26
SNX20-202ENST00000330943 RAD51AP2Q09MP3 1159 aa16.65■□□□□ 0.26
SNX20-202ENST00000330943 KRT28Q7Z3Y7 464 aa16.65■□□□□ 0.26
SNX20-202ENST00000330943 NLRP2Q9NX02 1062 aa16.65■□□□□ 0.26
SNX20-202ENST00000330943 C5P01031 1676 aa16.65■□□□□ 0.26
SNX20-202ENST00000330943 SIPA1L3O60292 1781 aaPredicted RBP16.65■□□□□ 0.26
SNX20-202ENST00000330943 CASQ1P31415 396 aa16.65■□□□□ 0.26
SNX20-202ENST00000330943 KIF23Q02241 960 aaPredicted RBP16.65■□□□□ 0.26
SNX20-202ENST00000330943 HSP90AA4PQ58FG1 418 aa16.65■□□□□ 0.26
SNX20-202ENST00000330943 TXLNBQ8N3L3 684 aa16.65■□□□□ 0.26
SNX20-202ENST00000330943 WDR24Q96S15 920 aa16.65■□□□□ 0.26
SNX20-202ENST00000330943 RNF113AO15541 343 aaKnown RBP16.64■□□□□ 0.25
SNX20-202ENST00000330943 DHX16O60231 1041 aaKnown RBP16.64■□□□□ 0.25
SNX20-202ENST00000330943 SMC1AQ14683 1233 aaKnown RBP16.64■□□□□ 0.25
SNX20-202ENST00000330943 TUBE1Q9UJT0 475 aa16.64■□□□□ 0.25
SNX20-202ENST00000330943 ARHGAP6O43182 974 aa16.64■□□□□ 0.25
SNX20-202ENST00000330943 PRC1O43663 620 aa16.64■□□□□ 0.25
SNX20-202ENST00000330943 FCHSD1Q86WN1 690 aa16.64■□□□□ 0.25
SNX20-202ENST00000330943 MPHOSPH8Q99549 860 aa16.64■□□□□ 0.25
SNX20-202ENST00000330943 FANCLQ9NW38 375 aa16.64■□□□□ 0.25
SNX20-202ENST00000330943 HPS5Q9UPZ3 1129 aa16.64■□□□□ 0.25
SNX20-202ENST00000330943 ATP8B1O43520 1251 aa16.63■□□□□ 0.25
SNX20-202ENST00000330943 IFIT1P09914 478 aaKnown RBP16.63■□□□□ 0.25
SNX20-202ENST00000330943 PPP2R3AQ06190 1150 aa16.63■□□□□ 0.25
SNX20-202ENST00000330943 TMEM139Q8IV31 216 aa16.63■□□□□ 0.25
SNX20-202ENST00000330943 PDILTQ8N807 584 aa16.63■□□□□ 0.25
SNX20-202ENST00000330943 UBXN6Q9BZV1 441 aa16.63■□□□□ 0.25
SNX20-202ENST00000330943 AFDNP55196 1824 aaKnown RBP16.63■□□□□ 0.25
SNX20-202ENST00000330943 SLC39A14Q15043 492 aa16.63■□□□□ 0.25
SNX20-202ENST00000330943 OLFM4Q6UX06 510 aa16.63■□□□□ 0.25
SNX20-202ENST00000330943 KRBA2Q6ZNG9 492 aa16.63■□□□□ 0.25
SNX20-202ENST00000330943 GPR161Q8N6U8 529 aaKnown RBP16.63■□□□□ 0.25
SNX20-202ENST00000330943 OSBP2Q969R2 916 aa16.63■□□□□ 0.25
SNX20-202ENST00000330943 ARFGAP3Q9NP61 516 aa16.63■□□□□ 0.25
SNX20-202ENST00000330943 CSB-PGBD3P0DP91 1061 aa16.62■□□□□ 0.25
SNX20-202ENST00000330943 ZNF496Q96IT1 587 aaPredicted RBP16.62■□□□□ 0.25
SNX20-202ENST00000330943 BAG1Q99933 345 aaPredicted RBP16.62■□□□□ 0.25
SNX20-202ENST00000330943 MAP3K9P80192 1104 aa16.62■□□□□ 0.25
SNX20-202ENST00000330943 SLC20A2Q08357 652 aa16.62■□□□□ 0.25
SNX20-202ENST00000330943 GPS2Q13227 327 aa16.62■□□□□ 0.25
SNX20-202ENST00000330943 SHC4Q6S5L8 630 aa16.62■□□□□ 0.25
SNX20-202ENST00000330943 ATG9AQ7Z3C6 839 aa16.62■□□□□ 0.25
SNX20-202ENST00000330943 NFATC2IPQ8NCF5 419 aa16.62■□□□□ 0.25
SNX20-202ENST00000330943 AIFM3Q96NN9 605 aa16.62■□□□□ 0.25
SNX20-202ENST00000330943 INTS13Q9NVM9 706 aa16.62■□□□□ 0.25
SNX20-202ENST00000330943 GOLGB1Q14789 3259 aaKnown RBP16.61■□□□□ 0.25
SNX20-202ENST00000330943 IMMTQ16891 758 aaKnown RBP16.61■□□□□ 0.25
SNX20-202ENST00000330943 FBXL16Q8N461 479 aa16.61■□□□□ 0.25
SNX20-202ENST00000330943 MRFAP1Q9Y605 127 aa16.61■□□□□ 0.25
SNX20-202ENST00000330943 GYS2P54840 703 aa16.61■□□□□ 0.25
SNX20-202ENST00000330943 WASHC4Q2M389 1173 aa16.61■□□□□ 0.25
SNX20-202ENST00000330943 TOGARAM2Q6ZUX3 1019 aa16.61■□□□□ 0.25
SNX20-202ENST00000330943 PARD6BQ9BYG5 372 aa16.61■□□□□ 0.25
SNX20-202ENST00000330943 TRIM34Q9BYJ4 488 aa16.61■□□□□ 0.25
SNX20-202ENST00000330943 FEZ2Q9UHY8 353 aaPredicted RBP16.61■□□□□ 0.25
SNX20-202ENST00000330943 FKBP4Q02790 459 aaKnown RBP eCLIP16.6■□□□□ 0.25
SNX20-202ENST00000330943 ARHGEF25Q86VW2 580 aa16.6■□□□□ 0.25
SNX20-202ENST00000330943 CLIC6Q96NY7 704 aa16.6■□□□□ 0.25
SNX20-202ENST00000330943 TSPYL1Q9H0U9 437 aa16.6■□□□□ 0.25
SNX20-202ENST00000330943 SLC52A2Q9HAB3 445 aa16.6■□□□□ 0.25
SNX20-202ENST00000330943 HPSEQ9Y251 543 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms