RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 FOXR1Q6PIV2 292 aa9.6□□□□□ -0.87
SKA2-201ENST00000330137 B4GALNT4Q76KP1 1039 aa9.6□□□□□ -0.87
SKA2-201ENST00000330137 G2E3Q7L622 706 aa9.6□□□□□ -0.87
SKA2-201ENST00000330137 CLASRPQ8N2M8 674 aaKnown RBP9.6□□□□□ -0.87
SKA2-201ENST00000330137 DHX58Q96C10 678 aa9.6□□□□□ -0.87
SKA2-201ENST00000330137 ABCB6Q9NP58 842 aa9.6□□□□□ -0.87
SKA2-201ENST00000330137 KDM6AO15550 1401 aaPredicted RBP9.6□□□□□ -0.87
SKA2-201ENST00000330137 EXOC5O00471 708 aa9.6□□□□□ -0.87
SKA2-201ENST00000330137 CHUKO15111 745 aa9.6□□□□□ -0.87
SKA2-201ENST00000330137 GIMAP7Q8NHV1 300 aa9.6□□□□□ -0.87
SKA2-201ENST00000330137 RPGRIP1Q96KN7 1286 aa9.6□□□□□ -0.87
SKA2-201ENST00000330137 PANX2Q96RD6 677 aa9.6□□□□□ -0.87
SKA2-201ENST00000330137 BICC1Q9H694 974 aaKnown RBP9.6□□□□□ -0.87
SKA2-201ENST00000330137 IL1RAPL2Q9NP60 686 aa9.6□□□□□ -0.87
SKA2-201ENST00000330137 POLR3EQ9NVU0 708 aa9.6□□□□□ -0.87
SKA2-201ENST00000330137 GGA2Q9UJY4 613 aa9.6□□□□□ -0.87
SKA2-201ENST00000330137 EMILIN1Q9Y6C2 1016 aa9.6□□□□□ -0.87
SKA2-201ENST00000330137 NUTM2FA1L443 756 aa9.59□□□□□ -0.87
SKA2-201ENST00000330137 TARSL2A2RTX5 802 aaKnown RBP9.59□□□□□ -0.87
SKA2-201ENST00000330137 FSBPO95073 299 aa9.59□□□□□ -0.87
SKA2-201ENST00000330137 DCTN1Q14203 1278 aa9.59□□□□□ -0.87
SKA2-201ENST00000330137 NUTM2GQ5VZR2 741 aa9.59□□□□□ -0.87
SKA2-201ENST00000330137 PPP1R42Q7Z4L9 355 aa9.59□□□□□ -0.87
SKA2-201ENST00000330137 FMNL3Q8IVF7 1028 aa9.59□□□□□ -0.87
SKA2-201ENST00000330137 MAGEC3Q8TD91 643 aa9.59□□□□□ -0.87
SKA2-201ENST00000330137 CCDC12Q8WUD4 166 aaPredicted RBP9.59□□□□□ -0.87
SKA2-201ENST00000330137 CCDC102AQ96A19 550 aa9.59□□□□□ -0.87
SKA2-201ENST00000330137 NEDD4P46934 1319 aa9.59□□□□□ -0.87
SKA2-201ENST00000330137 KIF5CO60282 957 aa9.59□□□□□ -0.87
SKA2-201ENST00000330137 RNF40O75150 1001 aa9.59□□□□□ -0.87
SKA2-201ENST00000330137 WDHD1O75717 1129 aaPredicted RBP9.59□□□□□ -0.87
SKA2-201ENST00000330137 SERPINC1P01008 464 aa9.59□□□□□ -0.87
SKA2-201ENST00000330137 PRR29P0C7W0 189 aa9.59□□□□□ -0.87
SKA2-201ENST00000330137 GPTP24298 496 aa9.59□□□□□ -0.87
SKA2-201ENST00000330137 ME1P48163 572 aa9.59□□□□□ -0.87
SKA2-201ENST00000330137 IRX1P78414 480 aaPredicted RBP9.59□□□□□ -0.87
SKA2-201ENST00000330137 LRCH2Q5VUJ6 765 aa9.59□□□□□ -0.87
SKA2-201ENST00000330137 NBPF6Q5VWK0 638 aa9.59□□□□□ -0.87
SKA2-201ENST00000330137 ILDR1Q86SU0 546 aaPredicted RBP9.59□□□□□ -0.87
SKA2-201ENST00000330137 XAGE2Q96GT9 111 aa9.59□□□□□ -0.87
SKA2-201ENST00000330137 COG3Q96JB2 828 aa9.59□□□□□ -0.87
SKA2-201ENST00000330137 NBPF4Q96M43 638 aa9.59□□□□□ -0.87
SKA2-201ENST00000330137 HSD3B7Q9H2F3 369 aa9.59□□□□□ -0.87
SKA2-201ENST00000330137 BSDC1Q9NW68 430 aaPredicted RBP9.59□□□□□ -0.87
SKA2-201ENST00000330137 MED1Q15648 1581 aaPredicted RBP9.59□□□□□ -0.87
SKA2-201ENST00000330137 MAP3K15Q6ZN16 1313 aa9.59□□□□□ -0.88
SKA2-201ENST00000330137 FAM237AA0A1B0GTK4 181 aa9.58□□□□□ -0.88
SKA2-201ENST00000330137 SHTN1A0MZ66 631 aa9.58□□□□□ -0.88
SKA2-201ENST00000330137 ZEB2O60315 1214 aa9.58□□□□□ -0.88
SKA2-201ENST00000330137 ARHGAP25P42331 645 aa9.58□□□□□ -0.88
SKA2-201ENST00000330137 MRPL12P52815 198 aaKnown RBP9.58□□□□□ -0.88
SKA2-201ENST00000330137 PPFIA1Q13136 1202 aa9.58□□□□□ -0.88
SKA2-201ENST00000330137 CRYMQ14894 314 aa9.58□□□□□ -0.88
SKA2-201ENST00000330137 CCDC50Q8IVM0 306 aa9.58□□□□□ -0.88
SKA2-201ENST00000330137 JMYQ8N9B5 988 aa9.58□□□□□ -0.88
SKA2-201ENST00000330137 USP28Q96RU2 1077 aa9.58□□□□□ -0.88
SKA2-201ENST00000330137 PCDHA7Q9UN72 937 aa9.58□□□□□ -0.88
SKA2-201ENST00000330137 FAM169AQ9Y6X4 670 aa9.58□□□□□ -0.88
SKA2-201ENST00000330137 AKAP12Q02952 1782 aa9.58□□□□□ -0.88
SKA2-201ENST00000330137 NCAPD2Q15021 1401 aa9.58□□□□□ -0.88
SKA2-201ENST00000330137 CDHR2Q9BYE9 1310 aa9.58□□□□□ -0.88
SKA2-201ENST00000330137 CTAGE15A4D2H0 777 aa9.58□□□□□ -0.88
SKA2-201ENST00000330137 SRRM3A6NNA2 597 aaPredicted RBP9.58□□□□□ -0.88
SKA2-201ENST00000330137 CLSTN1O94985 981 aa9.58□□□□□ -0.88
SKA2-201ENST00000330137 CTAGE8P0CG41 777 aa9.58□□□□□ -0.88
SKA2-201ENST00000330137 CMA1P23946 247 aa9.58□□□□□ -0.88
SKA2-201ENST00000330137 INPP5BP32019 993 aa9.58□□□□□ -0.88
SKA2-201ENST00000330137 CTAGE6Q86UF2 777 aa9.58□□□□□ -0.88
SKA2-201ENST00000330137 CTAGE4Q8IX94 777 aa9.58□□□□□ -0.88
SKA2-201ENST00000330137 FBXL16Q8N461 479 aa9.58□□□□□ -0.88
SKA2-201ENST00000330137 MIEF2Q96C03 454 aa9.58□□□□□ -0.88
SKA2-201ENST00000330137 EPC1Q9H2F5 836 aa9.58□□□□□ -0.88
SKA2-201ENST00000330137 TSPYL4Q9UJ04 414 aa9.58□□□□□ -0.88
SKA2-201ENST00000330137 SALL1Q9NSC2 1324 aa9.58□□□□□ -0.88
SKA2-201ENST00000330137 SYF2O95926 243 aaKnown RBP9.58□□□□□ -0.88
SKA2-201ENST00000330137 DRP2Q13474 957 aa9.58□□□□□ -0.88
SKA2-201ENST00000330137 CFAP100Q494V2 611 aa9.58□□□□□ -0.88
SKA2-201ENST00000330137 PREPLQ4J6C6 727 aaPredicted RBP9.58□□□□□ -0.88
SKA2-201ENST00000330137 WLSQ5T9L3 541 aa9.58□□□□□ -0.88
SKA2-201ENST00000330137 SPECC1LQ69YQ0 1117 aa9.58□□□□□ -0.88
SKA2-201ENST00000330137 KCNV1Q6PIU1 500 aa9.58□□□□□ -0.88
SKA2-201ENST00000330137 MICALCLQ6ZW33 695 aa9.58□□□□□ -0.88
SKA2-201ENST00000330137 BRAPQ7Z569 592 aa9.58□□□□□ -0.88
SKA2-201ENST00000330137 WAPLQ7Z5K2 1190 aa9.58□□□□□ -0.88
SKA2-201ENST00000330137 KAT2BQ92831 832 aa9.58□□□□□ -0.88
SKA2-201ENST00000330137 AGXT2Q9BYV1 514 aa9.58□□□□□ -0.88
SKA2-201ENST00000330137 MCM8Q9UJA3 840 aa9.58□□□□□ -0.88
SKA2-201ENST00000330137 TTF2Q9UNY4 1162 aaKnown RBP9.58□□□□□ -0.88
SKA2-201ENST00000330137 CTAGE9A4FU28 777 aa9.57□□□□□ -0.88
SKA2-201ENST00000330137 IFIT2P09913 472 aaKnown RBP9.57□□□□□ -0.88
SKA2-201ENST00000330137 RDXP35241 583 aaKnown RBP9.57□□□□□ -0.88
SKA2-201ENST00000330137 ANKRD18AQ8IVF6 992 aa9.57□□□□□ -0.88
SKA2-201ENST00000330137 LINC00301Q8NCQ3 95 aa9.57□□□□□ -0.88
SKA2-201ENST00000330137 SMARCC1Q92922 1105 aaPredicted RBP9.57□□□□□ -0.88
SKA2-201ENST00000330137 SYTL4Q96C24 671 aaPredicted RBP9.57□□□□□ -0.88
SKA2-201ENST00000330137 CCDC51Q96ER9 411 aa9.57□□□□□ -0.88
SKA2-201ENST00000330137 NEK1Q96PY6 1258 aa9.57□□□□□ -0.88
SKA2-201ENST00000330137 PNKPQ96T60 521 aa9.57□□□□□ -0.88
SKA2-201ENST00000330137 C19orf44Q9H6X5 657 aa9.57□□□□□ -0.88
SKA2-201ENST00000330137 DIP2AQ14689 1571 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms