RNA–Protein interactions for RNA: ENST00000330133.4

MRPL54-201, Transcript of mitochondrial ribosomal protein L54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL54, Length 626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54-201ENST00000330133 SPDYE6P0CI01 402 aa23.23■■□□□ 1.31
MRPL54-201ENST00000330133 FMR1Q06787 632 aaKnown RBP eCLIP23.23■■□□□ 1.31
MRPL54-201ENST00000330133 SPTY2D1Q68D10 685 aaPredicted RBP23.23■■□□□ 1.31
MRPL54-201ENST00000330133 SPATA5Q8NB90 893 aa23.23■■□□□ 1.31
MRPL54-201ENST00000330133 TEKT1Q969V4 418 aa23.23■■□□□ 1.31
MRPL54-201ENST00000330133 PRMT6Q96LA8 375 aaPredicted RBP23.23■■□□□ 1.31
MRPL54-201ENST00000330133 DCTPP1Q9H773 170 aa23.23■■□□□ 1.31
MRPL54-201ENST00000330133 ARAP2Q8WZ64 1704 aa23.22■■□□□ 1.31
MRPL54-201ENST00000330133 ADM5C9JUS6 153 aa23.22■■□□□ 1.31
MRPL54-201ENST00000330133 IFIT2P09913 472 aaKnown RBP23.22■■□□□ 1.31
MRPL54-201ENST00000330133 LRRCC1Q9C099 1032 aa23.22■■□□□ 1.31
MRPL54-201ENST00000330133 CREBZFQ9NS37 354 aa23.22■■□□□ 1.31
MRPL54-201ENST00000330133 TLR7Q9NYK1 1049 aaKnown RBP23.22■■□□□ 1.31
MRPL54-201ENST00000330133 ABCF2Q9UG63 623 aa23.22■■□□□ 1.31
MRPL54-201ENST00000330133 PCDHAC2Q9Y5I4 1007 aa23.22■■□□□ 1.31
MRPL54-201ENST00000330133 APOBEC3FQ8IUX4 373 aaKnown RBP23.21■■□□□ 1.31
MRPL54-201ENST00000330133 EXOC6Q8TAG9 804 aa23.21■■□□□ 1.31
MRPL54-201ENST00000330133 ZNF512BQ96KM6 892 aaPredicted RBP23.21■■□□□ 1.31
MRPL54-201ENST00000330133 CELF2O95319 508 aaKnown RBP23.2■■□□□ 1.3
MRPL54-201ENST00000330133 PRDX5P30044 214 aa23.2■■□□□ 1.3
MRPL54-201ENST00000330133 MCAMP43121 646 aa23.2■■□□□ 1.3
MRPL54-201ENST00000330133 HTRA3P83110 453 aa23.2■■□□□ 1.3
MRPL54-201ENST00000330133 HHIPL2Q6UWX4 724 aa23.2■■□□□ 1.3
MRPL54-201ENST00000330133 ZNF408Q9H9D4 720 aa23.2■■□□□ 1.3
MRPL54-201ENST00000330133 CLRN2A0PK11 232 aa23.19■■□□□ 1.3
MRPL54-201ENST00000330133 PI16Q6UXB8 463 aa23.19■■□□□ 1.3
MRPL54-201ENST00000330133 ERICH6Q7L0X2 663 aa23.19■■□□□ 1.3
MRPL54-201ENST00000330133 SNRKQ9NRH2 765 aa23.19■■□□□ 1.3
MRPL54-201ENST00000330133 CST9Q5W186 159 aa23.18■■□□□ 1.3
MRPL54-201ENST00000330133 DLK2Q6UY11 383 aa23.18■■□□□ 1.3
MRPL54-201ENST00000330133 DZIP1Q86YF9 867 aaKnown RBP23.18■■□□□ 1.3
MRPL54-201ENST00000330133 ZDHHC15Q96MV8 337 aa23.18■■□□□ 1.3
MRPL54-201ENST00000330133 VEZTQ9HBM0 779 aa23.18■■□□□ 1.3
MRPL54-201ENST00000330133 SCAF8Q9UPN6 1271 aaKnown RBP23.18■■□□□ 1.3
MRPL54-201ENST00000330133 SLF2Q8IX21 1173 aa23.17■■□□□ 1.3
MRPL54-201ENST00000330133 CDCA5Q96FF9 252 aa23.17■■□□□ 1.3
MRPL54-201ENST00000330133 TDRD3Q9H7E2 651 aaKnown RBP23.17■■□□□ 1.3
MRPL54-201ENST00000330133 ZNF70Q9UC06 446 aaPredicted RBP23.17■■□□□ 1.3
MRPL54-201ENST00000330133 SMARCA5O60264 1052 aaPredicted RBP23.16■■□□□ 1.3
MRPL54-201ENST00000330133 SPDYE2Q495Y8 402 aa23.16■■□□□ 1.3
MRPL54-201ENST00000330133 TBC1D9Q6ZT07 1266 aa23.16■■□□□ 1.3
MRPL54-201ENST00000330133 LRP2BPQ9P2M1 347 aa23.16■■□□□ 1.3
MRPL54-201ENST00000330133 ABT1Q9ULW3 272 aaKnown RBP23.16■■□□□ 1.3
MRPL54-201ENST00000330133 ZAP70P43403 619 aa23.15■■□□□ 1.3
MRPL54-201ENST00000330133 HDAC1Q13547 482 aaPredicted RBP23.15■■□□□ 1.3
MRPL54-201ENST00000330133 DIXDC1Q155Q3 683 aa23.15■■□□□ 1.3
MRPL54-201ENST00000330133 TMOD2Q9NZR1 351 aa23.15■■□□□ 1.3
MRPL54-201ENST00000330133 RAI14Q9P0K7 980 aa23.15■■□□□ 1.3
MRPL54-201ENST00000330133 AOX1Q06278 1338 aa23.14■■□□□ 1.3
MRPL54-201ENST00000330133 IRX6P78412 446 aaPredicted RBP23.14■■□□□ 1.29
MRPL54-201ENST00000330133 GSTO1P78417 241 aa23.14■■□□□ 1.29
MRPL54-201ENST00000330133 APOBEC3HQ6NTF7 200 aaKnown RBP23.14■■□□□ 1.29
MRPL54-201ENST00000330133 DEFB129Q9H1M3 183 aa23.14■■□□□ 1.29
MRPL54-201ENST00000330133 RWDD1Q9H446 243 aaPredicted RBP23.14■■□□□ 1.29
MRPL54-201ENST00000330133 DAGLAQ9Y4D2 1042 aa23.14■■□□□ 1.29
MRPL54-201ENST00000330133 MECOMQ03112 1051 aa23.13■■□□□ 1.29
MRPL54-201ENST00000330133 TNFAIP1Q13829 316 aa23.13■■□□□ 1.29
MRPL54-201ENST00000330133 C2orf69Q8N8R5 385 aa23.13■■□□□ 1.29
MRPL54-201ENST00000330133 ZBTB47Q9UFB7 747 aaPredicted RBP23.13■■□□□ 1.29
MRPL54-201ENST00000330133 PPP2R3BQ9Y5P8 575 aa23.13■■□□□ 1.29
MRPL54-201ENST00000330133 MYH13Q9UKX3 1938 aa23.12■■□□□ 1.29
MRPL54-201ENST00000330133 CYP2E1P05181 493 aaPredicted RBP23.12■■□□□ 1.29
MRPL54-201ENST00000330133 LDHCP07864 332 aa23.12■■□□□ 1.29
MRPL54-201ENST00000330133 NF2P35240 595 aa23.12■■□□□ 1.29
MRPL54-201ENST00000330133 PRAMEF18Q5VWM3 479 aa23.12■■□□□ 1.29
MRPL54-201ENST00000330133 DNAJC5GQ8N7S2 189 aa23.12■■□□□ 1.29
MRPL54-201ENST00000330133 GCC1Q96CN9 775 aa23.12■■□□□ 1.29
MRPL54-201ENST00000330133 GBA2Q9HCG7 927 aaPredicted RBP23.12■■□□□ 1.29
MRPL54-201ENST00000330133 TCP10L2B9ZVM9 353 aa23.11■■□□□ 1.29
MRPL54-201ENST00000330133 TNNI2P48788 182 aa23.11■■□□□ 1.29
MRPL54-201ENST00000330133 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.11■■□□□ 1.29
MRPL54-201ENST00000330133 FAM163AQ96GL9 167 aaPredicted RBP23.11■■□□□ 1.29
MRPL54-201ENST00000330133 TLL2Q9Y6L7 1015 aa23.11■■□□□ 1.29
MRPL54-201ENST00000330133 IGSF3O75054 1194 aa23.1■■□□□ 1.29
MRPL54-201ENST00000330133 RASA3Q14644 834 aa23.1■■□□□ 1.29
MRPL54-201ENST00000330133 DEFB115Q30KQ5 88 aa23.1■■□□□ 1.29
MRPL54-201ENST00000330133 NSUN4Q96CB9 384 aaKnown RBP23.1■■□□□ 1.29
MRPL54-201ENST00000330133 KLRG1Q96E93 195 aa23.1■■□□□ 1.29
MRPL54-201ENST00000330133 USP40Q9NVE5 1235 aa23.1■■□□□ 1.29
MRPL54-201ENST00000330133 MKRN1Q9UHC7 482 aaKnown RBP23.1■■□□□ 1.29
MRPL54-201ENST00000330133 GAKO14976 1311 aa23.09■■□□□ 1.29
MRPL54-201ENST00000330133 ATP5JP18859 108 aa23.09■■□□□ 1.29
MRPL54-201ENST00000330133 CDC42EP5Q6NZY7 148 aa23.09■■□□□ 1.29
MRPL54-201ENST00000330133 GPATCH3Q96I76 525 aa23.09■■□□□ 1.29
MRPL54-201ENST00000330133 PIH1D3Q9NQM4 214 aaKnown RBP23.09■■□□□ 1.29
MRPL54-201ENST00000330133 MROH7-TTC4A0A0A0MT08 1334 aa23.08■■□□□ 1.29
MRPL54-201ENST00000330133 RASSF10A6NK89 507 aa23.08■■□□□ 1.29
MRPL54-201ENST00000330133 TTF1Q15361 905 aaPredicted RBP23.08■■□□□ 1.29
MRPL54-201ENST00000330133 SUPT20HL1Q3ZLR7 823 aa23.08■■□□□ 1.29
MRPL54-201ENST00000330133 ANKRD45Q5TZF3 282 aa23.08■■□□□ 1.29
MRPL54-201ENST00000330133 FKBP1CQ5VVH2 108 aa23.08■■□□□ 1.29
MRPL54-201ENST00000330133 NAA16Q6N069 864 aaPredicted RBP23.08■■□□□ 1.29
MRPL54-201ENST00000330133 SAPCD2Q86UD0 394 aa23.08■■□□□ 1.29
MRPL54-201ENST00000330133 NDUFB9Q9Y6M9 179 aa23.08■■□□□ 1.29
MRPL54-201ENST00000330133 POLR2AP24928 1970 aaKnown RBP23.08■■□□□ 1.29
MRPL54-201ENST00000330133 CNTNAP1P78357 1384 aa23.07■■□□□ 1.28
MRPL54-201ENST00000330133 CACNB3P54284 484 aa23.07■■□□□ 1.28
MRPL54-201ENST00000330133 HUNKP57058 714 aa23.07■■□□□ 1.28
MRPL54-201ENST00000330133 FKBP1BP68106 108 aa23.07■■□□□ 1.28
MRPL54-201ENST00000330133 TTLL12Q14166 644 aaPredicted RBP23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms