RNA–Protein interactions for RNA: ENST00000329758.5

TRIM49-201, Transcript of tripartite motif containing 49, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM49, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-201ENST00000329758 LRRCC1Q9C099 1032 aa8.61□□□□□ -1.03
TRIM49-201ENST00000329758 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.61□□□□□ -1.03
TRIM49-201ENST00000329758 SCN11AQ9UI33 1791 aa8.61□□□□□ -1.03
TRIM49-201ENST00000329758 MYH15Q9Y2K3 1946 aa8.61□□□□□ -1.03
TRIM49-201ENST00000329758 MEGF6O75095 1541 aa8.61□□□□□ -1.03
TRIM49-201ENST00000329758 ERLIN1O75477 346 aa8.61□□□□□ -1.03
TRIM49-201ENST00000329758 USP5P45974 858 aa8.61□□□□□ -1.03
TRIM49-201ENST00000329758 RWDD2BP57060 319 aa8.61□□□□□ -1.03
TRIM49-201ENST00000329758 KRT85P78386 507 aa8.61□□□□□ -1.03
TRIM49-201ENST00000329758 TRAF1Q13077 416 aa8.61□□□□□ -1.03
TRIM49-201ENST00000329758 GORABQ5T7V8 394 aa8.61□□□□□ -1.03
TRIM49-201ENST00000329758 CWC27Q6UX04 472 aaKnown RBP8.61□□□□□ -1.03
TRIM49-201ENST00000329758 RAPGEF4Q8WZA2 1011 aa8.61□□□□□ -1.03
TRIM49-201ENST00000329758 OSBPL3Q9H4L5 887 aa8.61□□□□□ -1.03
TRIM49-201ENST00000329758 PDE11AQ9HCR9 933 aa8.61□□□□□ -1.03
TRIM49-201ENST00000329758 SPATS2LQ9NUQ6 558 aaKnown RBP8.61□□□□□ -1.03
TRIM49-201ENST00000329758 PARP3Q9Y6F1 533 aa8.61□□□□□ -1.03
TRIM49-201ENST00000329758 SPATA31A3Q5VYP0 1347 aa8.6□□□□□ -1.03
TRIM49-201ENST00000329758 DTNBO60941 627 aa8.6□□□□□ -1.03
TRIM49-201ENST00000329758 ARID4AP29374 1257 aaPredicted RBP8.6□□□□□ -1.03
TRIM49-201ENST00000329758 TXLNAP40222 546 aa8.6□□□□□ -1.03
TRIM49-201ENST00000329758 TUBB4BP68371 445 aa8.6□□□□□ -1.03
TRIM49-201ENST00000329758 DNM1Q05193 864 aaKnown RBP8.6□□□□□ -1.03
TRIM49-201ENST00000329758 TBC1D8BQ0IIM8 1120 aa8.6□□□□□ -1.03
TRIM49-201ENST00000329758 AMOTQ4VCS5 1084 aa8.6□□□□□ -1.03
TRIM49-201ENST00000329758 HSP90B2PQ58FF3 399 aa8.6□□□□□ -1.03
TRIM49-201ENST00000329758 WWC2Q6AWC2 1192 aa8.6□□□□□ -1.03
TRIM49-201ENST00000329758 TTC19Q6DKK2 380 aaPredicted RBP8.6□□□□□ -1.03
TRIM49-201ENST00000329758 NOL8Q76FK4 1167 aaKnown RBP8.6□□□□□ -1.03
TRIM49-201ENST00000329758 FCHSD1Q86WN1 690 aa8.6□□□□□ -1.03
TRIM49-201ENST00000329758 HOMER1Q86YM7 354 aa8.6□□□□□ -1.03
TRIM49-201ENST00000329758 AMOTL1Q8IY63 956 aa8.6□□□□□ -1.03
TRIM49-201ENST00000329758 CTCFLQ8NI51 663 aaPredicted RBP8.6□□□□□ -1.03
TRIM49-201ENST00000329758 BICD2Q8TD16 824 aa8.6□□□□□ -1.03
TRIM49-201ENST00000329758 ESYT1Q9BSJ8 1104 aa8.6□□□□□ -1.03
TRIM49-201ENST00000329758 PARD6BQ9BYG5 372 aa8.6□□□□□ -1.03
TRIM49-201ENST00000329758 DNAJC25Q9H1X3 360 aa8.6□□□□□ -1.03
TRIM49-201ENST00000329758 SMC3Q9UQE7 1217 aa8.6□□□□□ -1.03
TRIM49-201ENST00000329758 FAN1Q9Y2M0 1017 aa8.6□□□□□ -1.03
TRIM49-201ENST00000329758 PKD1L3Q7Z443 1732 aa8.6□□□□□ -1.03
TRIM49-201ENST00000329758 A0A1B0GUA9 196 aa8.59□□□□□ -1.03
TRIM49-201ENST00000329758 CYP27B1O15528 508 aa8.59□□□□□ -1.03
TRIM49-201ENST00000329758 URI1O94763 535 aaPredicted RBP8.59□□□□□ -1.03
TRIM49-201ENST00000329758 PPP2R3AQ06190 1150 aa8.59□□□□□ -1.03
TRIM49-201ENST00000329758 WLSQ5T9L3 541 aa8.59□□□□□ -1.03
TRIM49-201ENST00000329758 CEP112Q8N8E3 955 aa8.59□□□□□ -1.03
TRIM49-201ENST00000329758 KLHDC4Q8TBB5 520 aa8.59□□□□□ -1.03
TRIM49-201ENST00000329758 JPH2Q9BR39 696 aaPredicted RBP8.59□□□□□ -1.03
TRIM49-201ENST00000329758 KDM6AO15550 1401 aaPredicted RBP8.59□□□□□ -1.03
TRIM49-201ENST00000329758 EXOC5O00471 708 aa8.59□□□□□ -1.03
TRIM49-201ENST00000329758 PAX7P23759 505 aa8.59□□□□□ -1.03
TRIM49-201ENST00000329758 LIG3P49916 1009 aa8.59□□□□□ -1.03
TRIM49-201ENST00000329758 PDCD2Q16342 344 aaPredicted RBP8.59□□□□□ -1.03
TRIM49-201ENST00000329758 STX1AQ16623 288 aa8.59□□□□□ -1.03
TRIM49-201ENST00000329758 VPS53Q5VIR6 699 aa8.59□□□□□ -1.03
TRIM49-201ENST00000329758 ANKRD18AQ8IVF6 992 aa8.59□□□□□ -1.03
TRIM49-201ENST00000329758 CKAP2LQ8IYA6 745 aa8.59□□□□□ -1.03
TRIM49-201ENST00000329758 ARMC2Q8NEN0 867 aa8.59□□□□□ -1.03
TRIM49-201ENST00000329758 CCDC26Q8TAB7 109 aa8.59□□□□□ -1.03
TRIM49-201ENST00000329758 ZNF496Q96IT1 587 aaPredicted RBP8.59□□□□□ -1.03
TRIM49-201ENST00000329758 GBP3Q9H0R5 595 aa8.59□□□□□ -1.03
TRIM49-201ENST00000329758 BICC1Q9H694 974 aaKnown RBP8.59□□□□□ -1.03
TRIM49-201ENST00000329758 SLC24A3Q9HC58 644 aa8.59□□□□□ -1.03
TRIM49-201ENST00000329758 PALD1Q9ULE6 856 aa8.59□□□□□ -1.03
TRIM49-201ENST00000329758 MTMR6Q9Y217 621 aa8.59□□□□□ -1.03
TRIM49-201ENST00000329758 ZBTB12Q9Y330 459 aaPredicted RBP8.59□□□□□ -1.03
TRIM49-201ENST00000329758 USP16Q9Y5T5 823 aa8.59□□□□□ -1.03
TRIM49-201ENST00000329758 MRFAP1Q9Y605 127 aa8.59□□□□□ -1.03
TRIM49-201ENST00000329758 SALL3Q9BXA9 1300 aa8.59□□□□□ -1.04
TRIM49-201ENST00000329758 C5P01031 1676 aa8.59□□□□□ -1.04
TRIM49-201ENST00000329758 GOLGA6L9A6NEM1 432 aa8.58□□□□□ -1.04
TRIM49-201ENST00000329758 PHKG2P15735 406 aa8.58□□□□□ -1.04
TRIM49-201ENST00000329758 SFPQP23246 707 aaKnown RBP eCLIP8.58□□□□□ -1.04
TRIM49-201ENST00000329758 INPP5BP32019 993 aa8.58□□□□□ -1.04
TRIM49-201ENST00000329758 GNL2Q13823 731 aaKnown RBP8.58□□□□□ -1.04
TRIM49-201ENST00000329758 PDIA6Q15084 440 aa8.58□□□□□ -1.04
TRIM49-201ENST00000329758 FBXW10Q5XX13 1052 aa8.58□□□□□ -1.04
TRIM49-201ENST00000329758 TRIM65Q6PJ69 517 aa8.58□□□□□ -1.04
TRIM49-201ENST00000329758 TTC6Q86TZ1 520 aa8.58□□□□□ -1.04
TRIM49-201ENST00000329758 AFAP1L1Q8TED9 768 aa8.58□□□□□ -1.04
TRIM49-201ENST00000329758 ZNF483Q8TF39 744 aaPredicted RBP8.58□□□□□ -1.04
TRIM49-201ENST00000329758 BAG1Q99933 345 aaPredicted RBP8.58□□□□□ -1.04
TRIM49-201ENST00000329758 DACT1Q9NYF0 836 aa8.58□□□□□ -1.04
TRIM49-201ENST00000329758 DBF4Q9UBU7 674 aaPredicted RBP8.58□□□□□ -1.04
TRIM49-201ENST00000329758 RAB21Q9UL25 225 aa8.58□□□□□ -1.04
TRIM49-201ENST00000329758 ODF2LQ9ULJ1 636 aa8.58□□□□□ -1.04
TRIM49-201ENST00000329758 ABCC6O95255 1503 aa8.58□□□□□ -1.04
TRIM49-201ENST00000329758 ANKRD65E5RJM6 399 aa8.58□□□□□ -1.04
TRIM49-201ENST00000329758 EBAG9O00559 213 aa8.58□□□□□ -1.04
TRIM49-201ENST00000329758 SHOX2O60902 331 aaPredicted RBP8.58□□□□□ -1.04
TRIM49-201ENST00000329758 COQ9O75208 318 aa8.58□□□□□ -1.04
TRIM49-201ENST00000329758 RTN2O75298 545 aa8.58□□□□□ -1.04
TRIM49-201ENST00000329758 TUBBP07437 444 aa8.58□□□□□ -1.04
TRIM49-201ENST00000329758 TATP17735 454 aaPredicted RBP8.58□□□□□ -1.04
TRIM49-201ENST00000329758 MAP3K9P80192 1104 aa8.58□□□□□ -1.04
TRIM49-201ENST00000329758 MTA1Q13330 715 aa8.58□□□□□ -1.04
TRIM49-201ENST00000329758 RBBP5Q15291 538 aaKnown RBP8.58□□□□□ -1.04
TRIM49-201ENST00000329758 CAMK4Q16566 473 aa8.58□□□□□ -1.04
TRIM49-201ENST00000329758 BEND6Q5SZJ8 279 aaPredicted RBP8.58□□□□□ -1.04
TRIM49-201ENST00000329758 ZNF790Q6PG37 636 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms