RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 CFAP100Q494V2 611 aa20.02■□□□□ 0.8
PDLIM1-201ENST00000329399 DCPSQ96C86 337 aaKnown RBP20.02■□□□□ 0.8
PDLIM1-201ENST00000329399 STAP2Q9UGK3 403 aa20.02■□□□□ 0.8
PDLIM1-201ENST00000329399 MKRN1Q9UHC7 482 aaKnown RBP20.02■□□□□ 0.8
PDLIM1-201ENST00000329399 TTF2Q9UNY4 1162 aaKnown RBP20.02■□□□□ 0.8
PDLIM1-201ENST00000329399 CELF2O95319 508 aaKnown RBP20.01■□□□□ 0.79
PDLIM1-201ENST00000329399 RHPN1Q8TCX5 695 aa20.01■□□□□ 0.79
PDLIM1-201ENST00000329399 ZNF408Q9H9D4 720 aa20.01■□□□□ 0.79
PDLIM1-201ENST00000329399 RASGRF1Q13972 1273 aa20■□□□□ 0.79
PDLIM1-201ENST00000329399 PI16Q6UXB8 463 aa20■□□□□ 0.79
PDLIM1-201ENST00000329399 KLRG1Q96E93 195 aa20■□□□□ 0.79
PDLIM1-201ENST00000329399 HDAC9Q9UKV0 1011 aa20■□□□□ 0.79
PDLIM1-201ENST00000329399 AKAP2Q9Y2D5 859 aa20■□□□□ 0.79
PDLIM1-201ENST00000329399 SPDYE2BA6NHP3 402 aa19.99■□□□□ 0.79
PDLIM1-201ENST00000329399 SPDYE6P0CI01 402 aa19.99■□□□□ 0.79
PDLIM1-201ENST00000329399 OS9Q13438 667 aaPredicted RBP19.99■□□□□ 0.79
PDLIM1-201ENST00000329399 DLGAP5Q15398 846 aa19.99■□□□□ 0.79
PDLIM1-201ENST00000329399 TNNI3KQ59H18 835 aa19.99■□□□□ 0.79
PDLIM1-201ENST00000329399 TTC22Q5TAA0 569 aa19.99■□□□□ 0.79
PDLIM1-201ENST00000329399 MTMR14Q8NCE2 650 aa19.99■□□□□ 0.79
PDLIM1-201ENST00000329399 DBNDD2Q9BQY9 259 aa19.99■□□□□ 0.79
PDLIM1-201ENST00000329399 TLR7Q9NYK1 1049 aaKnown RBP19.99■□□□□ 0.79
PDLIM1-201ENST00000329399 FPGT-TNNI3KV9GXZ4 949 aa19.99■□□□□ 0.79
PDLIM1-201ENST00000329399 CLRN2A0PK11 232 aa19.99■□□□□ 0.79
PDLIM1-201ENST00000329399 CLASRPQ8N2M8 674 aaKnown RBP19.99■□□□□ 0.79
PDLIM1-201ENST00000329399 EAF2Q96CJ1 260 aaPredicted RBP19.99■□□□□ 0.79
PDLIM1-201ENST00000329399 SALL3Q9BXA9 1300 aa19.98■□□□□ 0.79
PDLIM1-201ENST00000329399 PRDX5P30044 214 aa19.98■□□□□ 0.79
PDLIM1-201ENST00000329399 PDE1AP54750 535 aa19.98■□□□□ 0.79
PDLIM1-201ENST00000329399 SULF1Q8IWU6 871 aa19.98■□□□□ 0.79
PDLIM1-201ENST00000329399 CDCA5Q96FF9 252 aa19.98■□□□□ 0.79
PDLIM1-201ENST00000329399 APBB1O00213 710 aa19.97■□□□□ 0.79
PDLIM1-201ENST00000329399 MX1P20591 662 aa19.97■□□□□ 0.79
PDLIM1-201ENST00000329399 CRKP46108 304 aa19.97■□□□□ 0.79
PDLIM1-201ENST00000329399 RBM5P52756 815 aaKnown RBP eCLIP19.97■□□□□ 0.79
PDLIM1-201ENST00000329399 CASC1Q6TDU7 716 aa19.97■□□□□ 0.79
PDLIM1-201ENST00000329399 TBC1D22AQ8WUA7 517 aa19.97■□□□□ 0.79
PDLIM1-201ENST00000329399 CCDC8Q9H0W5 538 aaPredicted RBP19.97■□□□□ 0.79
PDLIM1-201ENST00000329399 MMP14P50281 582 aa19.96■□□□□ 0.79
PDLIM1-201ENST00000329399 GPATCH3Q96I76 525 aa19.96■□□□□ 0.79
PDLIM1-201ENST00000329399 TDRD3Q9H7E2 651 aaKnown RBP19.96■□□□□ 0.79
PDLIM1-201ENST00000329399 GPR108Q9NPR9 543 aa19.96■□□□□ 0.79
PDLIM1-201ENST00000329399 GNL3LQ9NVN8 582 aaKnown RBP19.96■□□□□ 0.79
PDLIM1-201ENST00000329399 HMG20BQ9P0W2 317 aa19.96■□□□□ 0.79
PDLIM1-201ENST00000329399 DBNLQ9UJU6 430 aaKnown RBP19.96■□□□□ 0.79
PDLIM1-201ENST00000329399 SERPINA10Q9UK55 444 aa19.96■□□□□ 0.79
PDLIM1-201ENST00000329399 ABT1Q9ULW3 272 aaKnown RBP19.96■□□□□ 0.79
PDLIM1-201ENST00000329399 TRPM7Q96QT4 1865 aa19.96■□□□□ 0.79
PDLIM1-201ENST00000329399 TTC41PQ6P2S7 1318 aa19.95■□□□□ 0.78
PDLIM1-201ENST00000329399 PITPNM2Q9BZ72 1349 aa19.95■□□□□ 0.78
PDLIM1-201ENST00000329399 ARAP2Q8WZ64 1704 aa19.95■□□□□ 0.78
PDLIM1-201ENST00000329399 SMARCA5O60264 1052 aaPredicted RBP19.95■□□□□ 0.78
PDLIM1-201ENST00000329399 CDC45O75419 566 aa19.95■□□□□ 0.78
PDLIM1-201ENST00000329399 VEGFBP49765 207 aa19.95■□□□□ 0.78
PDLIM1-201ENST00000329399 DIXDC1Q155Q3 683 aa19.95■□□□□ 0.78
PDLIM1-201ENST00000329399 TBC1D9Q6ZT07 1266 aa19.95■□□□□ 0.78
PDLIM1-201ENST00000329399 MOB2Q70IA6 237 aa19.95■□□□□ 0.78
PDLIM1-201ENST00000329399 SAPCD2Q86UD0 394 aa19.95■□□□□ 0.78
PDLIM1-201ENST00000329399 WDR66Q8TBY9 1149 aa19.95■□□□□ 0.78
PDLIM1-201ENST00000329399 IL1RAPL2Q9NP60 686 aa19.95■□□□□ 0.78
PDLIM1-201ENST00000329399 DENND2AQ9ULE3 1009 aa19.95■□□□□ 0.78
PDLIM1-201ENST00000329399 CNTNAP1P78357 1384 aa19.95■□□□□ 0.78
PDLIM1-201ENST00000329399 MCAMP43121 646 aa19.94■□□□□ 0.78
PDLIM1-201ENST00000329399 APOBEC3HQ6NTF7 200 aaKnown RBP19.94■□□□□ 0.78
PDLIM1-201ENST00000329399 ZNF384Q8TF68 577 aa19.94■□□□□ 0.78
PDLIM1-201ENST00000329399 DDRGK1Q96HY6 314 aa19.94■□□□□ 0.78
PDLIM1-201ENST00000329399 TLL2Q9Y6L7 1015 aa19.94■□□□□ 0.78
PDLIM1-201ENST00000329399 RASSF10A6NK89 507 aa19.93■□□□□ 0.78
PDLIM1-201ENST00000329399 ERC2O15083 957 aa19.93■□□□□ 0.78
PDLIM1-201ENST00000329399 ARID4AP29374 1257 aaPredicted RBP19.93■□□□□ 0.78
PDLIM1-201ENST00000329399 DEFB115Q30KQ5 88 aa19.93■□□□□ 0.78
PDLIM1-201ENST00000329399 GORABQ5T7V8 394 aa19.93■□□□□ 0.78
PDLIM1-201ENST00000329399 SNRKQ9NRH2 765 aa19.93■□□□□ 0.78
PDLIM1-201ENST00000329399 ZNF70Q9UC06 446 aaPredicted RBP19.93■□□□□ 0.78
PDLIM1-201ENST00000329399 FZD1Q9UP38 647 aa19.93■□□□□ 0.78
PDLIM1-201ENST00000329399 SEMA3EO15041 775 aa19.92■□□□□ 0.78
PDLIM1-201ENST00000329399 ZBTB22O15209 634 aa19.92■□□□□ 0.78
PDLIM1-201ENST00000329399 CACNB3P54284 484 aa19.92■□□□□ 0.78
PDLIM1-201ENST00000329399 CDAN1Q8IWY9 1227 aa19.92■□□□□ 0.78
PDLIM1-201ENST00000329399 JMYQ8N9B5 988 aa19.92■□□□□ 0.78
PDLIM1-201ENST00000329399 BCL11AQ9H165 835 aa19.92■□□□□ 0.78
PDLIM1-201ENST00000329399 DEFB129Q9H1M3 183 aa19.92■□□□□ 0.78
PDLIM1-201ENST00000329399 SALL1Q9NSC2 1324 aa19.92■□□□□ 0.78
PDLIM1-201ENST00000329399 SPDYE2Q495Y8 402 aa19.92■□□□□ 0.78
PDLIM1-201ENST00000329399 CYP4F22Q6NT55 531 aa19.92■□□□□ 0.78
PDLIM1-201ENST00000329399 SPATA5Q8NB90 893 aa19.92■□□□□ 0.78
PDLIM1-201ENST00000329399 MRIQ9BWK5 157 aa19.92■□□□□ 0.78
PDLIM1-201ENST00000329399 VEZTQ9HBM0 779 aa19.92■□□□□ 0.78
PDLIM1-201ENST00000329399 SUGT1Q9Y2Z0 365 aa19.92■□□□□ 0.78
PDLIM1-201ENST00000329399 HDLBPQ00341 1268 aaKnown RBP19.91■□□□□ 0.78
PDLIM1-201ENST00000329399 TEKT1Q969V4 418 aa19.91■□□□□ 0.78
PDLIM1-201ENST00000329399 ZDHHC15Q96MV8 337 aa19.91■□□□□ 0.78
PDLIM1-201ENST00000329399 GBA2Q9HCG7 927 aaPredicted RBP19.91■□□□□ 0.78
PDLIM1-201ENST00000329399 ABCF2Q9UG63 623 aa19.91■□□□□ 0.78
PDLIM1-201ENST00000329399 NDUFB9Q9Y6M9 179 aa19.91■□□□□ 0.78
PDLIM1-201ENST00000329399 MYH13Q9UKX3 1938 aa19.9■□□□□ 0.78
PDLIM1-201ENST00000329399 GLRX3O76003 335 aaKnown RBP19.9■□□□□ 0.78
PDLIM1-201ENST00000329399 LDHBP07195 334 aaKnown RBP19.9■□□□□ 0.78
PDLIM1-201ENST00000329399 IFIT2P09913 472 aaKnown RBP19.9■□□□□ 0.78
PDLIM1-201ENST00000329399 GSPT1P15170 499 aaKnown RBP19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms