RNA–Protein interactions for RNA: ENST00000329305.6

TPM2-201, Transcript of tropomyosin 2, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM2, Length 1,018 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2-201ENST00000329305 MYH13Q9UKX3 1938 aa20.18■□□□□ 0.82
TPM2-201ENST00000329305 PRDX5P30044 214 aa20.18■□□□□ 0.82
TPM2-201ENST00000329305 MCAMP43121 646 aa20.18■□□□□ 0.82
TPM2-201ENST00000329305 CRKP46108 304 aa20.18■□□□□ 0.82
TPM2-201ENST00000329305 GLIS2Q9BZE0 524 aaPredicted RBP20.18■□□□□ 0.82
TPM2-201ENST00000329305 ZBTB47Q9UFB7 747 aaPredicted RBP20.18■□□□□ 0.82
TPM2-201ENST00000329305 PASKQ96RG2 1323 aa20.18■□□□□ 0.82
TPM2-201ENST00000329305 SPDYE2BA6NHP3 402 aa20.17■□□□□ 0.82
TPM2-201ENST00000329305 SPDYE6P0CI01 402 aa20.17■□□□□ 0.82
TPM2-201ENST00000329305 IRX6P78412 446 aaPredicted RBP20.17■□□□□ 0.82
TPM2-201ENST00000329305 HDAC1Q13547 482 aaPredicted RBP20.17■□□□□ 0.82
TPM2-201ENST00000329305 GRIK5Q16478 980 aa20.17■□□□□ 0.82
TPM2-201ENST00000329305 ZBED3Q96IU2 234 aaPredicted RBP20.17■□□□□ 0.82
TPM2-201ENST00000329305 MRIQ9BWK5 157 aa20.17■□□□□ 0.82
TPM2-201ENST00000329305 ASTN2O75129 1339 aaPredicted RBP20.17■□□□□ 0.82
TPM2-201ENST00000329305 ERICH6Q7L0X2 663 aa20.16■□□□□ 0.82
TPM2-201ENST00000329305 USP48Q86UV5 1035 aa20.16■□□□□ 0.82
TPM2-201ENST00000329305 DZIP1Q86YF9 867 aaKnown RBP20.16■□□□□ 0.82
TPM2-201ENST00000329305 APOBEC3FQ8IUX4 373 aaKnown RBP20.16■□□□□ 0.82
TPM2-201ENST00000329305 SLF2Q8IX21 1173 aa20.16■□□□□ 0.82
TPM2-201ENST00000329305 RWDD1Q9H446 243 aaPredicted RBP20.16■□□□□ 0.82
TPM2-201ENST00000329305 HHIPL2Q6UWX4 724 aa20.15■□□□□ 0.82
TPM2-201ENST00000329305 PI16Q6UXB8 463 aa20.15■□□□□ 0.82
TPM2-201ENST00000329305 GCC1Q96CN9 775 aa20.15■□□□□ 0.82
TPM2-201ENST00000329305 PRMT6Q96LA8 375 aaPredicted RBP20.15■□□□□ 0.82
TPM2-201ENST00000329305 SNRKQ9NRH2 765 aa20.15■□□□□ 0.82
TPM2-201ENST00000329305 ADM5C9JUS6 153 aa20.14■□□□□ 0.81
TPM2-201ENST00000329305 TRAF5O00463 557 aa20.14■□□□□ 0.81
TPM2-201ENST00000329305 SMARCA5O60264 1052 aaPredicted RBP20.14■□□□□ 0.81
TPM2-201ENST00000329305 ZDHHC15Q96MV8 337 aa20.14■□□□□ 0.81
TPM2-201ENST00000329305 LRP2BPQ9P2M1 347 aa20.14■□□□□ 0.81
TPM2-201ENST00000329305 PCDHAC2Q9Y5I4 1007 aa20.14■□□□□ 0.81
TPM2-201ENST00000329305 TMEM88BA6NKF7 163 aa20.13■□□□□ 0.81
TPM2-201ENST00000329305 VEZTQ9HBM0 779 aa20.13■□□□□ 0.81
TPM2-201ENST00000329305 CREBZFQ9NS37 354 aa20.13■□□□□ 0.81
TPM2-201ENST00000329305 RAI14Q9P0K7 980 aa20.13■□□□□ 0.81
TPM2-201ENST00000329305 CLRN2A0PK11 232 aa20.12■□□□□ 0.81
TPM2-201ENST00000329305 CENPBP07199 599 aaPredicted RBP20.12■□□□□ 0.81
TPM2-201ENST00000329305 ZAP70P43403 619 aa20.12■□□□□ 0.81
TPM2-201ENST00000329305 TNFAIP1Q13829 316 aa20.12■□□□□ 0.81
TPM2-201ENST00000329305 DIXDC1Q155Q3 683 aa20.12■□□□□ 0.81
TPM2-201ENST00000329305 TBC1D9Q6ZT07 1266 aa20.12■□□□□ 0.81
TPM2-201ENST00000329305 GPATCH3Q96I76 525 aa20.12■□□□□ 0.81
TPM2-201ENST00000329305 ZNF408Q9H9D4 720 aa20.12■□□□□ 0.81
TPM2-201ENST00000329305 TMOD2Q9NZR1 351 aa20.12■□□□□ 0.81
TPM2-201ENST00000329305 IGSF3O75054 1194 aa20.11■□□□□ 0.81
TPM2-201ENST00000329305 CELF2O95319 508 aaKnown RBP20.11■□□□□ 0.81
TPM2-201ENST00000329305 GSTO1P78417 241 aa20.11■□□□□ 0.81
TPM2-201ENST00000329305 SPDYE2Q495Y8 402 aa20.11■□□□□ 0.81
TPM2-201ENST00000329305 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.11■□□□□ 0.81
TPM2-201ENST00000329305 TDRD3Q9H7E2 651 aaKnown RBP20.11■□□□□ 0.81
TPM2-201ENST00000329305 ZNF70Q9UC06 446 aaPredicted RBP20.11■□□□□ 0.81
TPM2-201ENST00000329305 CYP2E1P05181 493 aaPredicted RBP20.1■□□□□ 0.81
TPM2-201ENST00000329305 MECOMQ03112 1051 aa20.1■□□□□ 0.81
TPM2-201ENST00000329305 FMR1Q06787 632 aaKnown RBP eCLIP20.1■□□□□ 0.81
TPM2-201ENST00000329305 DAGLAQ9Y4D2 1042 aa20.1■□□□□ 0.81
TPM2-201ENST00000329305 PPP2R3BQ9Y5P8 575 aa20.1■□□□□ 0.81
TPM2-201ENST00000329305 LDHCP07864 332 aa20.09■□□□□ 0.81
TPM2-201ENST00000329305 NF2P35240 595 aa20.09■□□□□ 0.81
TPM2-201ENST00000329305 TNNI2P48788 182 aa20.09■□□□□ 0.81
TPM2-201ENST00000329305 TTF1Q15361 905 aaPredicted RBP20.09■□□□□ 0.81
TPM2-201ENST00000329305 ANKRD45Q5TZF3 282 aa20.09■□□□□ 0.81
TPM2-201ENST00000329305 APOBEC3HQ6NTF7 200 aaKnown RBP20.09■□□□□ 0.81
TPM2-201ENST00000329305 CDCA5Q96FF9 252 aa20.09■□□□□ 0.81
TPM2-201ENST00000329305 SCAF8Q9UPN6 1271 aaKnown RBP20.09■□□□□ 0.81
TPM2-201ENST00000329305 ATP5JP18859 108 aa20.08■□□□□ 0.81
TPM2-201ENST00000329305 NSUN4Q96CB9 384 aaKnown RBP20.08■□□□□ 0.81
TPM2-201ENST00000329305 DNAJC2Q99543 621 aaKnown RBP20.08■□□□□ 0.81
TPM2-201ENST00000329305 DEFB129Q9H1M3 183 aa20.08■□□□□ 0.81
TPM2-201ENST00000329305 ABT1Q9ULW3 272 aaKnown RBP20.08■□□□□ 0.81
TPM2-201ENST00000329305 MROH7-TTC4A0A0A0MT08 1334 aa20.07■□□□□ 0.8
TPM2-201ENST00000329305 GAKO14976 1311 aa20.07■□□□□ 0.8
TPM2-201ENST00000329305 IDH1O75874 414 aaKnown RBP20.07■□□□□ 0.8
TPM2-201ENST00000329305 CST9Q5W186 159 aa20.07■□□□□ 0.8
TPM2-201ENST00000329305 DLK2Q6UY11 383 aa20.07■□□□□ 0.8
TPM2-201ENST00000329305 FAM163AQ96GL9 167 aaPredicted RBP20.07■□□□□ 0.8
TPM2-201ENST00000329305 ECHDC1Q9NTX5 307 aa20.07■□□□□ 0.8
TPM2-201ENST00000329305 AOX1Q06278 1338 aa20.06■□□□□ 0.8
TPM2-201ENST00000329305 TCP10L2B9ZVM9 353 aa20.06■□□□□ 0.8
TPM2-201ENST00000329305 HTRA3P83110 453 aa20.06■□□□□ 0.8
TPM2-201ENST00000329305 MAP3K12Q12852 859 aa20.06■□□□□ 0.8
TPM2-201ENST00000329305 NAA16Q6N069 864 aaPredicted RBP20.06■□□□□ 0.8
TPM2-201ENST00000329305 C2orf69Q8N8R5 385 aa20.06■□□□□ 0.8
TPM2-201ENST00000329305 NOL10Q9BSC4 688 aaKnown RBP20.06■□□□□ 0.8
TPM2-201ENST00000329305 BOLA2Q9H3K6 86 aa20.06■□□□□ 0.8
TPM2-201ENST00000329305 PIH1D3Q9NQM4 214 aaKnown RBP20.06■□□□□ 0.8
TPM2-201ENST00000329305 NDUFB9Q9Y6M9 179 aa20.06■□□□□ 0.8
TPM2-201ENST00000329305 ECM29Q5VYK3 1845 aa20.05■□□□□ 0.8
TPM2-201ENST00000329305 IGHDP01880 384 aa20.05■□□□□ 0.8
TPM2-201ENST00000329305 BTDP43251 543 aa20.05■□□□□ 0.8
TPM2-201ENST00000329305 RASA3Q14644 834 aa20.05■□□□□ 0.8
TPM2-201ENST00000329305 SMC5Q8IY18 1101 aa20.05■□□□□ 0.8
TPM2-201ENST00000329305 GBA2Q9HCG7 927 aaPredicted RBP20.05■□□□□ 0.8
TPM2-201ENST00000329305 GOLIM4O00461 696 aa20.04■□□□□ 0.8
TPM2-201ENST00000329305 ERC2O15083 957 aa20.04■□□□□ 0.8
TPM2-201ENST00000329305 FKBP1CQ5VVH2 108 aa20.04■□□□□ 0.8
TPM2-201ENST00000329305 PRAMEF18Q5VWM3 479 aa20.04■□□□□ 0.8
TPM2-201ENST00000329305 CDC42EP5Q6NZY7 148 aa20.04■□□□□ 0.8
TPM2-201ENST00000329305 TMED8Q6PL24 325 aaPredicted RBP20.04■□□□□ 0.8
TPM2-201ENST00000329305 HAUS7Q99871 368 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms