RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 PRSS33Q8NF86 280 aa8.92□□□□□ -0.98
CSTF3-201ENST00000323959 SIN3AQ96ST3 1273 aa8.92□□□□□ -0.98
CSTF3-201ENST00000323959 PARK7Q99497 189 aaKnown RBP8.92□□□□□ -0.98
CSTF3-201ENST00000323959 NSFL1CQ9UNZ2 370 aaKnown RBP8.92□□□□□ -0.98
CSTF3-201ENST00000323959 PROB1E7EW31 1015 aa8.91□□□□□ -0.98
CSTF3-201ENST00000323959 MAP3K9P80192 1104 aa8.91□□□□□ -0.98
CSTF3-201ENST00000323959 PPIL2Q13356 520 aa8.91□□□□□ -0.98
CSTF3-201ENST00000323959 KIF6Q6ZMV9 814 aa8.91□□□□□ -0.98
CSTF3-201ENST00000323959 CSADQ9Y600 493 aa8.91□□□□□ -0.98
CSTF3-201ENST00000323959 SASH1O94885 1247 aa8.91□□□□□ -0.98
CSTF3-201ENST00000323959 ADGRE1Q14246 886 aa8.91□□□□□ -0.98
CSTF3-201ENST00000323959 CCDC85BQ15834 202 aaPredicted RBP8.91□□□□□ -0.98
CSTF3-201ENST00000323959 UTP14AQ9BVJ6 771 aaKnown RBP8.91□□□□□ -0.98
CSTF3-201ENST00000323959 PRDM12Q9H4Q4 367 aa8.91□□□□□ -0.98
CSTF3-201ENST00000323959 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.91□□□□□ -0.98
CSTF3-201ENST00000323959 PRUNE2Q8WUY3 3088 aa8.91□□□□□ -0.98
CSTF3-201ENST00000323959 SNRPA1P09661 255 aaKnown RBP8.9□□□□□ -0.98
CSTF3-201ENST00000323959 TEFQ10587 303 aa8.9□□□□□ -0.98
CSTF3-201ENST00000323959 LAMA3Q16787 3333 aa8.9□□□□□ -0.98
CSTF3-201ENST00000323959 FZD1Q9UP38 647 aa8.9□□□□□ -0.98
CSTF3-201ENST00000323959 FRMPD3Q5JV73 1810 aa8.9□□□□□ -0.98
CSTF3-201ENST00000323959 ARAP2Q8WZ64 1704 aa8.9□□□□□ -0.98
CSTF3-201ENST00000323959 ERO1BQ86YB8 467 aa8.9□□□□□ -0.98
CSTF3-201ENST00000323959 ZKSCAN4Q969J2 545 aaPredicted RBP8.9□□□□□ -0.98
CSTF3-201ENST00000323959 CNTNAP3BQ96NU0 1288 aa8.9□□□□□ -0.98
CSTF3-201ENST00000323959 CNTNAP3Q9BZ76 1288 aa8.9□□□□□ -0.98
CSTF3-201ENST00000323959 TAOK2Q9UL54 1235 aa8.9□□□□□ -0.98
CSTF3-201ENST00000323959 ZDBF2Q9HCK1 2354 aa8.9□□□□□ -0.98
CSTF3-201ENST00000323959 POU3F3P20264 500 aaPredicted RBP8.9□□□□□ -0.99
CSTF3-201ENST00000323959 TFF2Q03403 129 aa8.9□□□□□ -0.99
CSTF3-201ENST00000323959 SULT6B1Q6IMI4 303 aa8.9□□□□□ -0.99
CSTF3-201ENST00000323959 ST3GAL2Q16842 350 aa8.89□□□□□ -0.99
CSTF3-201ENST00000323959 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.89□□□□□ -0.99
CSTF3-201ENST00000323959 USP16Q9Y5T5 823 aa8.89□□□□□ -0.99
CSTF3-201ENST00000323959 VCANP13611 3396 aa8.89□□□□□ -0.99
CSTF3-201ENST00000323959 CEMIPQ8WUJ3 1361 aa8.89□□□□□ -0.99
CSTF3-201ENST00000323959 RAB30Q15771 203 aa8.89□□□□□ -0.99
CSTF3-201ENST00000323959 DACT2Q5SW24 774 aa8.89□□□□□ -0.99
CSTF3-201ENST00000323959 COA7Q96BR5 231 aa8.89□□□□□ -0.99
CSTF3-201ENST00000323959 TNPO2O14787 897 aaKnown RBP8.88□□□□□ -0.99
CSTF3-201ENST00000323959 IGFBP4P22692 258 aa8.88□□□□□ -0.99
CSTF3-201ENST00000323959 BRCA2P51587 3418 aa8.88□□□□□ -0.99
CSTF3-201ENST00000323959 RPAP1Q9BWH6 1393 aaPredicted RBP8.88□□□□□ -0.99
CSTF3-201ENST00000323959 ZNF318Q5VUA4 2279 aa8.88□□□□□ -0.99
CSTF3-201ENST00000323959 MED19A0JLT2 244 aaPredicted RBP8.88□□□□□ -0.99
CSTF3-201ENST00000323959 DCXO43602 365 aa8.88□□□□□ -0.99
CSTF3-201ENST00000323959 RTP1P59025 263 aa8.88□□□□□ -0.99
CSTF3-201ENST00000323959 VGLL4Q14135 290 aa8.88□□□□□ -0.99
CSTF3-201ENST00000323959 TRMT44Q8IYL2 757 aaKnown RBP8.88□□□□□ -0.99
CSTF3-201ENST00000323959 PLXNA3P51805 1871 aa8.88□□□□□ -0.99
CSTF3-201ENST00000323959 PDHXO00330 501 aa8.87□□□□□ -0.99
CSTF3-201ENST00000323959 NBPF12Q5TAG4 269 aaPredicted RBP8.87□□□□□ -0.99
CSTF3-201ENST00000323959 MAP3K21Q5TCX8 1036 aa8.87□□□□□ -0.99
CSTF3-201ENST00000323959 STRIP1Q5VSL9 837 aa8.87□□□□□ -0.99
CSTF3-201ENST00000323959 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.87□□□□□ -0.991e-7■■■■■ 46.8
CSTF3-201ENST00000323959 BADQ92934 168 aa8.87□□□□□ -0.99
CSTF3-201ENST00000323959 GGA1Q9UJY5 639 aa8.87□□□□□ -0.99
CSTF3-201ENST00000323959 GPTP24298 496 aa8.87□□□□□ -0.99
CSTF3-201ENST00000323959 L3MBTL2Q969R5 705 aa8.87□□□□□ -0.99
CSTF3-201ENST00000323959 POTEB3A0JP26 581 aa8.86□□□□□ -0.99
CSTF3-201ENST00000323959 POTEBQ6S5H4 581 aa8.86□□□□□ -0.99
CSTF3-201ENST00000323959 GJD3Q8N144 294 aa8.86□□□□□ -0.99
CSTF3-201ENST00000323959 MYO1BO43795 1136 aa8.86□□□□□ -0.99
CSTF3-201ENST00000323959 UFL1O94874 794 aa8.86□□□□□ -0.99
CSTF3-201ENST00000323959 MYBBP1AQ9BQG0 1328 aaKnown RBP8.86□□□□□ -0.99
CSTF3-201ENST00000323959 PLXNA1Q9UIW2 1896 aa8.85□□□□□ -0.99
CSTF3-201ENST00000323959 PIP4K2AP48426 406 aaPredicted RBP8.85□□□□□ -0.99
CSTF3-201ENST00000323959 TNFAIP1Q13829 316 aa8.85□□□□□ -0.99
CSTF3-201ENST00000323959 CCDC174Q6PII3 467 aa8.85□□□□□ -0.99
CSTF3-201ENST00000323959 GIGYF2Q6Y7W6 1299 aaKnown RBP8.85□□□□□ -0.99
CSTF3-201ENST00000323959 BMP8AQ7Z5Y6 402 aa8.85□□□□□ -0.99
CSTF3-201ENST00000323959 SLC45A1Q9Y2W3 748 aa8.85□□□□□ -0.99
CSTF3-201ENST00000323959 DLGAP5Q15398 846 aa8.85□□□□□ -0.99
CSTF3-201ENST00000323959 TESK2Q96S53 571 aa8.85□□□□□ -0.99
CSTF3-201ENST00000323959 MSRAQ9UJ68 235 aa8.85□□□□□ -0.99
CSTF3-201ENST00000323959 NUBP1P53384 320 aa8.84□□□□□ -0.99
CSTF3-201ENST00000323959 CARD11Q9BXL7 1154 aa8.84□□□□□ -0.99
CSTF3-201ENST00000323959 PPATQ06203 517 aa8.84□□□□□ -0.99
CSTF3-201ENST00000323959 HLA-CQ95604 372 aa8.84□□□□□ -0.99
CSTF3-201ENST00000323959 CD320Q9NPF0 282 aa8.84□□□□□ -0.99
CSTF3-201ENST00000323959 SNCAIPQ9Y6H5 919 aa8.84□□□□□ -0.99
CSTF3-201ENST00000323959 GAKO14976 1311 aa8.84□□□□□ -0.99
CSTF3-201ENST00000323959 RLFQ13129 1914 aa8.84□□□□□ -0.99
CSTF3-201ENST00000323959 MED23Q9ULK4 1368 aa8.84□□□□□ -0.99
CSTF3-201ENST00000323959 TCF15Q12870 199 aa8.84□□□□□ -1
CSTF3-201ENST00000323959 SF3B3Q15393 1217 aaKnown RBP8.84□□□□□ -1
CSTF3-201ENST00000323959 DGLUCYQ7Z3D6 616 aa8.84□□□□□ -1
CSTF3-201ENST00000323959 KMT2EQ8IZD2 1858 aa8.83□□□□□ -1
CSTF3-201ENST00000323959 SNX17Q15036 470 aa8.83□□□□□ -1
CSTF3-201ENST00000323959 SKIV2LQ15477 1246 aaKnown RBP8.83□□□□□ -1
CSTF3-201ENST00000323959 DACH1Q9UI36 760 aa8.83□□□□□ -1
CSTF3-201ENST00000323959 ATP2B4P23634 1241 aa8.83□□□□□ -1
CSTF3-201ENST00000323959 NEUROD1Q13562 356 aa8.83□□□□□ -1
CSTF3-201ENST00000323959 MTHFSDQ2M296 383 aaKnown RBP8.83□□□□□ -1
CSTF3-201ENST00000323959 FAM178BQ8IXR5 827 aa8.83□□□□□ -1
CSTF3-201ENST00000323959 PDLIM7Q9NR12 457 aa8.83□□□□□ -1
CSTF3-201ENST00000323959 MUC3AQ02505 3323 aa8.83□□□□□ -1
CSTF3-201ENST00000323959 CENPFP49454 3210 aa8.82□□□□□ -1
CSTF3-201ENST00000323959 DIEXFQ68CQ4 756 aaKnown RBP8.82□□□□□ -1
CSTF3-201ENST00000323959 HOOK2Q96ED9 719 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms