RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 ZNF594Q96JF6 807 aaPredicted RBP14.59□□□□□ -0.07
DNMT3A-202ENST00000321117 DDX41Q9UJV9 622 aaKnown RBP14.59□□□□□ -0.07
DNMT3A-202ENST00000321117 STARD3NLO95772 234 aa14.58□□□□□ -0.07
DNMT3A-202ENST00000321117 NUTM2AQ8IVF1 878 aaPredicted RBP14.58□□□□□ -0.07
DNMT3A-202ENST00000321117 DCAF5Q96JK2 942 aa14.58□□□□□ -0.07
DNMT3A-202ENST00000321117 ABCF2Q9UG63 623 aa14.58□□□□□ -0.07
DNMT3A-202ENST00000321117 USP31Q70CQ4 1352 aa14.58□□□□□ -0.07
DNMT3A-202ENST00000321117 RBM6P78332 1123 aaKnown RBP14.58□□□□□ -0.08
DNMT3A-202ENST00000321117 PPP1R13BQ96KQ4 1090 aa14.58□□□□□ -0.08
DNMT3A-202ENST00000321117 FUCA2Q9BTY2 467 aa14.58□□□□□ -0.08
DNMT3A-202ENST00000321117 RNF41Q9H4P4 317 aaPredicted RBP14.58□□□□□ -0.08
DNMT3A-202ENST00000321117 RAI14Q9P0K7 980 aa14.58□□□□□ -0.08
DNMT3A-202ENST00000321117 ANGEL1Q9UNK9 670 aaKnown RBP14.58□□□□□ -0.08
DNMT3A-202ENST00000321117 CLIC4Q9Y696 253 aa14.58□□□□□ -0.08
DNMT3A-202ENST00000321117 APPBP2Q92624 585 aa14.58□□□□□ -0.08
DNMT3A-202ENST00000321117 DIP2CQ9Y2E4 1556 aa14.58□□□□□ -0.08
DNMT3A-202ENST00000321117 PLEKHG1Q9ULL1 1385 aa14.58□□□□□ -0.08
DNMT3A-202ENST00000321117 RTN1Q16799 776 aa14.58□□□□□ -0.08
DNMT3A-202ENST00000321117 CEP112Q8N8E3 955 aa14.58□□□□□ -0.08
DNMT3A-202ENST00000321117 FBXO18Q8NFZ0 1043 aa14.58□□□□□ -0.08
DNMT3A-202ENST00000321117 PUF60Q9UHX1 559 aaKnown RBP14.58□□□□□ -0.08
DNMT3A-202ENST00000321117 ZSCAN20P17040 1043 aaPredicted RBP14.57□□□□□ -0.08
DNMT3A-202ENST00000321117 WTAPQ15007 396 aa14.57□□□□□ -0.08
DNMT3A-202ENST00000321117 FBXO38Q6PIJ6 1188 aa14.57□□□□□ -0.08
DNMT3A-202ENST00000321117 GNL3LQ9NVN8 582 aaKnown RBP14.57□□□□□ -0.08
DNMT3A-202ENST00000321117 OVOS2A0A0J9YW53 1432 aa14.57□□□□□ -0.08
DNMT3A-202ENST00000321117 OVOS2Q6IE36 1432 aa14.57□□□□□ -0.08
DNMT3A-202ENST00000321117 CTAGE15A4D2H0 777 aa14.57□□□□□ -0.08
DNMT3A-202ENST00000321117 CTAGE8P0CG41 777 aa14.57□□□□□ -0.08
DNMT3A-202ENST00000321117 CMA1P23946 247 aa14.57□□□□□ -0.08
DNMT3A-202ENST00000321117 KRT40Q6A162 431 aa14.57□□□□□ -0.08
DNMT3A-202ENST00000321117 CTAGE6Q86UF2 777 aa14.57□□□□□ -0.08
DNMT3A-202ENST00000321117 CTAGE4Q8IX94 777 aa14.57□□□□□ -0.08
DNMT3A-202ENST00000321117 ANKRD7Q92527 254 aa14.57□□□□□ -0.08
DNMT3A-202ENST00000321117 CTAGE1Q96RT6 745 aa14.57□□□□□ -0.08
DNMT3A-202ENST00000321117 TRMT112Q9UI30 125 aaKnown RBP14.57□□□□□ -0.08
DNMT3A-202ENST00000321117 STX17P56962 302 aa14.57□□□□□ -0.08
DNMT3A-202ENST00000321117 IQCEQ6IPM2 695 aa14.57□□□□□ -0.08
DNMT3A-202ENST00000321117 DEF6Q9H4E7 631 aa14.57□□□□□ -0.08
DNMT3A-202ENST00000321117 CARMIL3Q8ND23 1372 aa14.56□□□□□ -0.08
DNMT3A-202ENST00000321117 GPAA1O43292 621 aa14.56□□□□□ -0.08
DNMT3A-202ENST00000321117 CUTAO60888 179 aa14.56□□□□□ -0.08
DNMT3A-202ENST00000321117 DHX58Q96C10 678 aa14.56□□□□□ -0.08
DNMT3A-202ENST00000321117 NFE2L3Q9Y4A8 694 aa14.56□□□□□ -0.08
DNMT3A-202ENST00000321117 H0YHG0 523 aa14.56□□□□□ -0.08
DNMT3A-202ENST00000321117 CCDC181Q5TID7 509 aa14.56□□□□□ -0.08
DNMT3A-202ENST00000321117 CTAGE9A4FU28 777 aa14.56□□□□□ -0.08
DNMT3A-202ENST00000321117 MCM3P25205 808 aa14.56□□□□□ -0.08
DNMT3A-202ENST00000321117 PNOCQ13519 176 aa14.56□□□□□ -0.08
DNMT3A-202ENST00000321117 TMOD3Q9NYL9 352 aa14.56□□□□□ -0.08
DNMT3A-202ENST00000321117 B4E1Z4 1266 aa14.55□□□□□ -0.08
DNMT3A-202ENST00000321117 AKR1B15C9JRZ8 316 aaPredicted RBP14.55□□□□□ -0.08
DNMT3A-202ENST00000321117 AP5Z1O43299 807 aa14.55□□□□□ -0.08
DNMT3A-202ENST00000321117 ZNF569Q5MCW4 686 aa14.55□□□□□ -0.08
DNMT3A-202ENST00000321117 LINC00301Q8NCQ3 95 aa14.55□□□□□ -0.08
DNMT3A-202ENST00000321117 PHKBQ93100 1093 aa14.55□□□□□ -0.08
DNMT3A-202ENST00000321117 KRT23Q9C075 422 aa14.55□□□□□ -0.08
DNMT3A-202ENST00000321117 RNF216Q9NWF9 866 aaPredicted RBP14.55□□□□□ -0.08
DNMT3A-202ENST00000321117 USP27XA6NNY8 438 aa14.55□□□□□ -0.08
DNMT3A-202ENST00000321117 SLC5A1P13866 664 aa14.55□□□□□ -0.08
DNMT3A-202ENST00000321117 ZBTB9Q96C00 473 aa14.55□□□□□ -0.08
DNMT3A-202ENST00000321117 ZFP91Q96JP5 570 aaPredicted RBP14.55□□□□□ -0.08
DNMT3A-202ENST00000321117 CNNM2Q9H8M5 875 aa14.55□□□□□ -0.08
DNMT3A-202ENST00000321117 PXDNLA1KZ92 1463 aa14.55□□□□□ -0.08
DNMT3A-202ENST00000321117 CTIFO43310 598 aaKnown RBP14.55□□□□□ -0.08
DNMT3A-202ENST00000321117 UQCRFS1P1P0C7P4 283 aa14.55□□□□□ -0.08
DNMT3A-202ENST00000321117 SPECC1Q5M775 1068 aa14.55□□□□□ -0.08
DNMT3A-202ENST00000321117 CCDC191Q8NCU4 936 aa14.55□□□□□ -0.08
DNMT3A-202ENST00000321117 ALDH8A1Q9H2A2 487 aaPredicted RBP14.55□□□□□ -0.08
DNMT3A-202ENST00000321117 IFT172Q9UG01 1749 aa14.55□□□□□ -0.08
DNMT3A-202ENST00000321117 NRKQ7Z2Y5 1582 aa14.55□□□□□ -0.08
DNMT3A-202ENST00000321117 RANBP6O60518 1105 aaKnown RBP14.55□□□□□ -0.08
DNMT3A-202ENST00000321117 CAPN2P17655 700 aa14.55□□□□□ -0.08
DNMT3A-202ENST00000321117 ZMYM1Q5SVZ6 1142 aa14.55□□□□□ -0.08
DNMT3A-202ENST00000321117 XAGE2Q96GT9 111 aa14.55□□□□□ -0.08
DNMT3A-202ENST00000321117 TRIM75PA6NK02 468 aa14.54□□□□□ -0.08
DNMT3A-202ENST00000321117 PTPN12Q05209 780 aaKnown RBP14.54□□□□□ -0.08
DNMT3A-202ENST00000321117 IQCA1Q86XH1 822 aa14.54□□□□□ -0.08
DNMT3A-202ENST00000321117 MLKLQ8NB16 471 aa14.54□□□□□ -0.08
DNMT3A-202ENST00000321117 TRIM34Q9BYJ4 488 aa14.54□□□□□ -0.08
DNMT3A-202ENST00000321117 GOLPH3LQ9H4A5 285 aa14.54□□□□□ -0.08
DNMT3A-202ENST00000321117 POLR3EQ9NVU0 708 aa14.54□□□□□ -0.08
DNMT3A-202ENST00000321117 VPS18Q9P253 973 aa14.54□□□□□ -0.08
DNMT3A-202ENST00000321117 POLR2DO15514 142 aaKnown RBP14.54□□□□□ -0.08
DNMT3A-202ENST00000321117 CTCFLQ8NI51 663 aaPredicted RBP14.54□□□□□ -0.08
DNMT3A-202ENST00000321117 SMARCC1Q92922 1105 aaPredicted RBP14.54□□□□□ -0.08
DNMT3A-202ENST00000321117 EFCAB8A8MWE9 144 aa14.53□□□□□ -0.08
DNMT3A-202ENST00000321117 OAS2P29728 719 aaKnown RBP14.53□□□□□ -0.08
DNMT3A-202ENST00000321117 SPAG1Q07617 926 aa14.53□□□□□ -0.08
DNMT3A-202ENST00000321117 TMTC2Q8N394 836 aa14.53□□□□□ -0.08
DNMT3A-202ENST00000321117 TMEM87BQ96K49 555 aa14.53□□□□□ -0.08
DNMT3A-202ENST00000321117 FANCLQ9NW38 375 aa14.53□□□□□ -0.08
DNMT3A-202ENST00000321117 MYO1BO43795 1136 aa14.53□□□□□ -0.08
DNMT3A-202ENST00000321117 RHOXF2BP0C7M4 288 aa14.53□□□□□ -0.08
DNMT3A-202ENST00000321117 IQCB1Q15051 598 aa14.53□□□□□ -0.08
DNMT3A-202ENST00000321117 TERF2Q15554 542 aa14.53□□□□□ -0.08
DNMT3A-202ENST00000321117 TSGA10IPQ3SY00 556 aa14.53□□□□□ -0.08
DNMT3A-202ENST00000321117 RRAGBQ5VZM2 374 aa14.53□□□□□ -0.08
DNMT3A-202ENST00000321117 CATIPQ7Z7H3 387 aa14.53□□□□□ -0.08
DNMT3A-202ENST00000321117 ORAI2Q96SN7 254 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms