RNA–Protein interactions for RNA: ENST00000320161.10

SGIP1-202, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 680 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-202ENST00000320161 SNAP23O00161 211 aa10.56□□□□□ -0.72
SGIP1-202ENST00000320161 VAMP4O75379 141 aa10.56□□□□□ -0.72
SGIP1-202ENST00000320161 ALDH1L1O75891 902 aa10.56□□□□□ -0.72
SGIP1-202ENST00000320161 HIBADHP31937 336 aaKnown RBP10.56□□□□□ -0.72
SGIP1-202ENST00000320161 FOXO4P98177 505 aa10.56□□□□□ -0.72
SGIP1-202ENST00000320161 SP3Q02447 781 aa10.56□□□□□ -0.72
SGIP1-202ENST00000320161 EXOSC9Q06265 439 aaKnown RBP10.56□□□□□ -0.72
SGIP1-202ENST00000320161 UBE4AQ14139 1066 aa10.56□□□□□ -0.72
SGIP1-202ENST00000320161 CAVIN4Q5BKX8 364 aa10.56□□□□□ -0.72
SGIP1-202ENST00000320161 NBPF12Q5TAG4 269 aaPredicted RBP10.56□□□□□ -0.72
SGIP1-202ENST00000320161 OTOP1Q7RTM1 612 aa10.56□□□□□ -0.72
SGIP1-202ENST00000320161 NBPF11Q86T75 865 aa10.56□□□□□ -0.72
SGIP1-202ENST00000320161 PRMT6Q96LA8 375 aaPredicted RBP10.56□□□□□ -0.72
SGIP1-202ENST00000320161 TMEM106CQ9BVX2 250 aa10.56□□□□□ -0.72
SGIP1-202ENST00000320161 SRCIN1Q9C0H9 1055 aa10.56□□□□□ -0.72
SGIP1-202ENST00000320161 KIAA0100Q14667 2235 aaKnown RBP10.56□□□□□ -0.72
SGIP1-202ENST00000320161 GTF2A2P52657 109 aa10.55□□□□□ -0.72
SGIP1-202ENST00000320161 CRHR2Q13324 411 aa10.55□□□□□ -0.72
SGIP1-202ENST00000320161 KIF22Q14807 665 aa10.55□□□□□ -0.72
SGIP1-202ENST00000320161 BEND3Q5T5X7 828 aa10.55□□□□□ -0.72
SGIP1-202ENST00000320161 CD99L2Q8TCZ2 262 aa10.55□□□□□ -0.72
SGIP1-202ENST00000320161 TBC1D22AQ8WUA7 517 aa10.55□□□□□ -0.72
SGIP1-202ENST00000320161 OPTNQ96CV9 577 aa10.55□□□□□ -0.72
SGIP1-202ENST00000320161 ZNF594Q96JF6 807 aaPredicted RBP10.55□□□□□ -0.72
SGIP1-202ENST00000320161 R3HDMLQ9H3Y0 253 aa10.55□□□□□ -0.72
SGIP1-202ENST00000320161 ELP3Q9H9T3 547 aa10.55□□□□□ -0.72
SGIP1-202ENST00000320161 ZFYVE28Q9HCC9 887 aa10.55□□□□□ -0.72
SGIP1-202ENST00000320161 ZNF70Q9UC06 446 aaPredicted RBP10.55□□□□□ -0.72
SGIP1-202ENST00000320161 FAM205AQ6ZU69 1335 aa10.55□□□□□ -0.72
SGIP1-202ENST00000320161 MROH5Q6ZUA9 1318 aa10.55□□□□□ -0.72
SGIP1-202ENST00000320161 SSC5DA1L4H1 1573 aa10.54□□□□□ -0.72
SGIP1-202ENST00000320161 TCP10L2B9ZVM9 353 aa10.54□□□□□ -0.72
SGIP1-202ENST00000320161 IGF2BP3O00425 579 aaKnown RBP eCLIP10.54□□□□□ -0.72
SGIP1-202ENST00000320161 USP2O75604 605 aaPredicted RBP10.54□□□□□ -0.72
SGIP1-202ENST00000320161 TAF1CQ15572 869 aaPredicted RBP10.54□□□□□ -0.72
SGIP1-202ENST00000320161 SPDYE2Q495Y8 402 aa10.54□□□□□ -0.72
SGIP1-202ENST00000320161 DZIP1LQ8IYY4 767 aaKnown RBP10.54□□□□□ -0.72
SGIP1-202ENST00000320161 TDRD3Q9H7E2 651 aaKnown RBP10.54□□□□□ -0.72
SGIP1-202ENST00000320161 PTPN22Q9Y2R2 807 aa10.54□□□□□ -0.72
SGIP1-202ENST00000320161 MAST3O60307 1309 aa10.54□□□□□ -0.72
SGIP1-202ENST00000320161 CCL15-CCL14A0A0B4J2E2 113 aa10.53□□□□□ -0.72
SGIP1-202ENST00000320161 GYG1P46976 350 aa10.53□□□□□ -0.72
SGIP1-202ENST00000320161 MAP3K9P80192 1104 aa10.53□□□□□ -0.72
SGIP1-202ENST00000320161 CHAF1AQ13111 956 aaPredicted RBP10.53□□□□□ -0.72
SGIP1-202ENST00000320161 CCL15Q16663 113 aa10.53□□□□□ -0.72
SGIP1-202ENST00000320161 SLC9C1Q4G0N8 1177 aa10.53□□□□□ -0.72
SGIP1-202ENST00000320161 METTL24Q5JXM2 366 aa10.53□□□□□ -0.72
SGIP1-202ENST00000320161 TDRD7Q8NHU6 1098 aaKnown RBP10.53□□□□□ -0.72
SGIP1-202ENST00000320161 TEKT1Q969V4 418 aa10.53□□□□□ -0.72
SGIP1-202ENST00000320161 PCDHAC2Q9Y5I4 1007 aa10.53□□□□□ -0.72
SGIP1-202ENST00000320161 IRS2Q9Y4H2 1338 aa10.53□□□□□ -0.72
SGIP1-202ENST00000320161 CRKP46108 304 aa10.52□□□□□ -0.73
SGIP1-202ENST00000320161 HDLBPQ00341 1268 aaKnown RBP10.52□□□□□ -0.73
SGIP1-202ENST00000320161 SLC4A8Q2Y0W8 1093 aa10.52□□□□□ -0.73
SGIP1-202ENST00000320161 DCAF15Q66K64 600 aa10.52□□□□□ -0.73
SGIP1-202ENST00000320161 OTUD5Q96G74 571 aa10.52□□□□□ -0.73
SGIP1-202ENST00000320161 TESPA1A2RU30 521 aaPredicted RBP10.51□□□□□ -0.73
SGIP1-202ENST00000320161 IFIT1P09914 478 aaKnown RBP10.51□□□□□ -0.73
SGIP1-202ENST00000320161 CETPP11597 493 aa10.51□□□□□ -0.73
SGIP1-202ENST00000320161 VGLL4Q14135 290 aa10.51□□□□□ -0.73
SGIP1-202ENST00000320161 CCDC184Q52MB2 194 aa10.51□□□□□ -0.73
SGIP1-202ENST00000320161 EPHA10Q5JZY3 1008 aa10.51□□□□□ -0.73
SGIP1-202ENST00000320161 ARMC5Q96C12 935 aa10.51□□□□□ -0.73
SGIP1-202ENST00000320161 FAM84BQ96KN1 310 aaPredicted RBP10.51□□□□□ -0.73
SGIP1-202ENST00000320161 TMEM39BQ9GZU3 492 aa10.51□□□□□ -0.73
SGIP1-202ENST00000320161 POTEFA5A3E0 1075 aa10.5□□□□□ -0.73
SGIP1-202ENST00000320161 GJA5P36382 358 aa10.5□□□□□ -0.73
SGIP1-202ENST00000320161 SNAPC2Q13487 334 aa10.5□□□□□ -0.73
SGIP1-202ENST00000320161 ERO1BQ86YB8 467 aa10.5□□□□□ -0.73
SGIP1-202ENST00000320161 WRNIP1Q96S55 665 aa10.5□□□□□ -0.73
SGIP1-202ENST00000320161 ZCCHC17Q9NP64 241 aaKnown RBP10.5□□□□□ -0.73
SGIP1-202ENST00000320161 IQSEC3Q9UPP2 1182 aaPredicted RBP10.5□□□□□ -0.73
SGIP1-202ENST00000320161 SUGT1Q9Y2Z0 365 aa10.5□□□□□ -0.73
SGIP1-202ENST00000320161 PDE8BO95263 885 aa10.49□□□□□ -0.73
SGIP1-202ENST00000320161 GNRH1P01148 92 aa10.49□□□□□ -0.73
SGIP1-202ENST00000320161 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.49□□□□□ -0.73
SGIP1-202ENST00000320161 FAM83AQ86UY5 434 aa10.49□□□□□ -0.73
SGIP1-202ENST00000320161 FAM9BQ8IZU0 186 aa10.49□□□□□ -0.73
SGIP1-202ENST00000320161 SUCLG2Q96I99 432 aa10.49□□□□□ -0.73
SGIP1-202ENST00000320161 PTPN18Q99952 460 aa10.49□□□□□ -0.73
SGIP1-202ENST00000320161 BICC1Q9H694 974 aaKnown RBP10.49□□□□□ -0.73
SGIP1-202ENST00000320161 SPDYE5A6NIY4 337 aa10.48□□□□□ -0.73
SGIP1-202ENST00000320161 SLC5A1P13866 664 aa10.48□□□□□ -0.73
SGIP1-202ENST00000320161 HOXD10P28358 340 aa10.48□□□□□ -0.73
SGIP1-202ENST00000320161 PRMT2P55345 433 aa10.48□□□□□ -0.73
SGIP1-202ENST00000320161 PUM3Q15397 648 aaKnown RBP10.48□□□□□ -0.73
SGIP1-202ENST00000320161 FKBP1CQ5VVH2 108 aa10.48□□□□□ -0.73
SGIP1-202ENST00000320161 FBXO33Q7Z6M2 555 aa10.48□□□□□ -0.73
SGIP1-202ENST00000320161 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.48□□□□□ -0.73
SGIP1-202ENST00000320161 WDR66Q8TBY9 1149 aa10.48□□□□□ -0.73
SGIP1-202ENST00000320161 BRI3BPQ8WY22 251 aa10.48□□□□□ -0.73
SGIP1-202ENST00000320161 MS4A4AQ96JQ5 239 aa10.48□□□□□ -0.73
SGIP1-202ENST00000320161 ZDHHC15Q96MV8 337 aa10.48□□□□□ -0.73
SGIP1-202ENST00000320161 TEPSINQ96N21 525 aa10.48□□□□□ -0.73
SGIP1-202ENST00000320161 MRIQ9BWK5 157 aa10.48□□□□□ -0.73
SGIP1-202ENST00000320161 ZNF341Q9BYN7 854 aa10.48□□□□□ -0.73
SGIP1-202ENST00000320161 PUS3Q9BZE2 481 aaKnown RBP10.48□□□□□ -0.73
SGIP1-202ENST00000320161 GNL3LQ9NVN8 582 aaKnown RBP10.48□□□□□ -0.73
SGIP1-202ENST00000320161 RIPOR2Q9Y4F9 1068 aa10.48□□□□□ -0.73
SGIP1-202ENST00000320161 PTPRCP08575 1304 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms