RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 CDK5RAP2Q96SN8 1893 aa16.41■□□□□ 0.22
PRPF18-201ENST00000320054 MYO3BQ8WXR4 1341 aa16.41■□□□□ 0.22
PRPF18-201ENST00000320054 ECM29Q5VYK3 1845 aa16.4■□□□□ 0.22
PRPF18-201ENST00000320054 FZD9O00144 591 aa16.4■□□□□ 0.22
PRPF18-201ENST00000320054 VIL1P09327 827 aaKnown RBP16.4■□□□□ 0.22
PRPF18-201ENST00000320054 GSTO1P78417 241 aa16.4■□□□□ 0.22
PRPF18-201ENST00000320054 MECOMQ03112 1051 aa16.4■□□□□ 0.22
PRPF18-201ENST00000320054 CWC27Q6UX04 472 aaKnown RBP16.4■□□□□ 0.22
PRPF18-201ENST00000320054 CERS5Q8N5B7 392 aa16.4■□□□□ 0.22
PRPF18-201ENST00000320054 MAGEB6Q8N7X4 407 aa16.4■□□□□ 0.22
PRPF18-201ENST00000320054 FBXW7Q969H0 707 aa16.4■□□□□ 0.22
PRPF18-201ENST00000320054 FAM227BQ96M60 508 aa16.4■□□□□ 0.22
PRPF18-201ENST00000320054 MAST3O60307 1309 aa16.4■□□□□ 0.22
PRPF18-201ENST00000320054 ZNF532Q9HCE3 1301 aa16.4■□□□□ 0.22
PRPF18-201ENST00000320054 A0A0D9SFI3 127 aa16.39■□□□□ 0.21
PRPF18-201ENST00000320054 SGSM2O43147 1006 aa16.39■□□□□ 0.21
PRPF18-201ENST00000320054 CXCL9Q07325 125 aa16.39■□□□□ 0.21
PRPF18-201ENST00000320054 TNIP1Q15025 636 aa16.39■□□□□ 0.21
PRPF18-201ENST00000320054 GRIK5Q16478 980 aa16.39■□□□□ 0.21
PRPF18-201ENST00000320054 MCMDC2Q4G0Z9 681 aa16.39■□□□□ 0.21
PRPF18-201ENST00000320054 CIAPIN1Q6FI81 312 aa16.39■□□□□ 0.21
PRPF18-201ENST00000320054 NAA16Q6N069 864 aaPredicted RBP16.39■□□□□ 0.21
PRPF18-201ENST00000320054 RSBN1LQ6PCB5 846 aaPredicted RBP16.39■□□□□ 0.21
PRPF18-201ENST00000320054 DZIP1Q86YF9 867 aaKnown RBP16.39■□□□□ 0.21
PRPF18-201ENST00000320054 ZNF384Q8TF68 577 aa16.39■□□□□ 0.21
PRPF18-201ENST00000320054 FOCADQ5VW36 1801 aa16.39■□□□□ 0.21
PRPF18-201ENST00000320054 ADAMTSL1Q8N6G6 1762 aa16.38■□□□□ 0.21
PRPF18-201ENST00000320054 PSMD14O00487 310 aa16.38■□□□□ 0.21
PRPF18-201ENST00000320054 RAD17O75943 681 aa16.38■□□□□ 0.21
PRPF18-201ENST00000320054 CHGBP05060 677 aa16.38■□□□□ 0.21
PRPF18-201ENST00000320054 LDHCP07864 332 aa16.38■□□□□ 0.21
PRPF18-201ENST00000320054 CYP7A1P22680 504 aa16.38■□□□□ 0.21
PRPF18-201ENST00000320054 EIF6P56537 245 aaKnown RBP16.38■□□□□ 0.21
PRPF18-201ENST00000320054 SLF2Q8IX21 1173 aa16.38■□□□□ 0.21
PRPF18-201ENST00000320054 FAM163AQ96GL9 167 aaPredicted RBP16.38■□□□□ 0.21
PRPF18-201ENST00000320054 MRIQ9BWK5 157 aa16.38■□□□□ 0.21
PRPF18-201ENST00000320054 MMP14P50281 582 aa16.37■□□□□ 0.21
PRPF18-201ENST00000320054 MFAP1P55081 439 aaKnown RBP16.37■□□□□ 0.21
PRPF18-201ENST00000320054 HDLBPQ00341 1268 aaKnown RBP16.37■□□□□ 0.21
PRPF18-201ENST00000320054 AGBL3Q8NEM8 1001 aa16.37■□□□□ 0.21
PRPF18-201ENST00000320054 OSBP2Q969R2 916 aa16.37■□□□□ 0.21
PRPF18-201ENST00000320054 GMLQ99445 158 aa16.37■□□□□ 0.21
PRPF18-201ENST00000320054 MXD3Q9BW11 206 aa16.37■□□□□ 0.21
PRPF18-201ENST00000320054 SRCAPQ6ZRS2 3230 aa16.37■□□□□ 0.21
PRPF18-201ENST00000320054 EPB41L2O43491 1005 aaKnown RBP16.36■□□□□ 0.21
PRPF18-201ENST00000320054 REC8O95072 547 aa16.36■□□□□ 0.21
PRPF18-201ENST00000320054 SLFNL1Q499Z3 407 aa16.36■□□□□ 0.21
PRPF18-201ENST00000320054 SEC62Q99442 399 aaKnown RBP16.36■□□□□ 0.21
PRPF18-201ENST00000320054 IL25Q9H293 177 aa16.36■□□□□ 0.21
PRPF18-201ENST00000320054 RNF181Q9P0P0 153 aa16.36■□□□□ 0.21
PRPF18-201ENST00000320054 TTF2Q9UNY4 1162 aaKnown RBP16.36■□□□□ 0.21
PRPF18-201ENST00000320054 MROH7-TTC4A0A0A0MT08 1334 aa16.36■□□□□ 0.21
PRPF18-201ENST00000320054 GAKO14976 1311 aa16.36■□□□□ 0.21
PRPF18-201ENST00000320054 CCDC171Q6TFL3 1326 aa16.36■□□□□ 0.21
PRPF18-201ENST00000320054 M0R2C6 588 aa16.35■□□□□ 0.21
PRPF18-201ENST00000320054 SEC24BO95487 1268 aa16.35■□□□□ 0.21
PRPF18-201ENST00000320054 RPS12P25398 132 aaKnown RBP16.35■□□□□ 0.21
PRPF18-201ENST00000320054 HHIPL2Q6UWX4 724 aa16.35■□□□□ 0.21
PRPF18-201ENST00000320054 ADGRA1Q86SQ6 560 aa16.35■□□□□ 0.21
PRPF18-201ENST00000320054 PUS7LQ9H0K6 701 aaKnown RBP16.35■□□□□ 0.21
PRPF18-201ENST00000320054 ZC3H4Q9UPT8 1303 aaKnown RBP16.35■□□□□ 0.21
PRPF18-201ENST00000320054 LAMA4Q16363 1823 aa16.34■□□□□ 0.21
PRPF18-201ENST00000320054 PPP4CP60510 307 aa16.34■□□□□ 0.21
PRPF18-201ENST00000320054 C9orf131Q5VYM1 1079 aa16.34■□□□□ 0.21
PRPF18-201ENST00000320054 KIAA1211Q6ZU35 1233 aa16.34■□□□□ 0.21
PRPF18-201ENST00000320054 ZNF589Q86UQ0 364 aaPredicted RBP16.34■□□□□ 0.21
PRPF18-201ENST00000320054 CERS3Q8IU89 383 aa16.34■□□□□ 0.21
PRPF18-201ENST00000320054 KIAA0825Q8IV33 1275 aa16.34■□□□□ 0.21
PRPF18-201ENST00000320054 GPR75-ASB3A0A0A6YYF3 556 aa16.33■□□□□ 0.2
PRPF18-201ENST00000320054 MAGEB6P1A0A0J9YX57 407 aa16.33■□□□□ 0.2
PRPF18-201ENST00000320054 GPAA1O43292 621 aa16.33■□□□□ 0.2
PRPF18-201ENST00000320054 DIXDC1Q155Q3 683 aa16.33■□□□□ 0.2
PRPF18-201ENST00000320054 DPF2Q92785 391 aa16.33■□□□□ 0.2
PRPF18-201ENST00000320054 TEKT1Q969V4 418 aa16.33■□□□□ 0.2
PRPF18-201ENST00000320054 AIDAQ96BJ3 306 aa16.33■□□□□ 0.2
PRPF18-201ENST00000320054 STRBPQ96SI9 672 aaKnown RBP16.33■□□□□ 0.2
PRPF18-201ENST00000320054 RIOK1Q9BRS2 568 aaKnown RBP16.33■□□□□ 0.2
PRPF18-201ENST00000320054 NOL10Q9BSC4 688 aaKnown RBP16.33■□□□□ 0.2
PRPF18-201ENST00000320054 SERPINA10Q9UK55 444 aa16.33■□□□□ 0.2
PRPF18-201ENST00000320054 HDAC9Q9UKV0 1011 aa16.33■□□□□ 0.2
PRPF18-201ENST00000320054 ZNF541Q9H0D2 1346 aa16.33■□□□□ 0.2
PRPF18-201ENST00000320054 NAV1Q8NEY1 1877 aa16.33■□□□□ 0.2
PRPF18-201ENST00000320054 BAZ2AQ9UIF9 1905 aaKnown RBP16.33■□□□□ 0.2
PRPF18-201ENST00000320054 F8W031 263 aaPredicted RBP16.32■□□□□ 0.2
PRPF18-201ENST00000320054 MBD4O95243 580 aa16.32■□□□□ 0.2
PRPF18-201ENST00000320054 BAG3O95817 575 aa16.32■□□□□ 0.2
PRPF18-201ENST00000320054 MYH1P12882 1939 aa16.32■□□□□ 0.2
PRPF18-201ENST00000320054 GNAT2P19087 354 aa16.32■□□□□ 0.2
PRPF18-201ENST00000320054 CRKP46108 304 aa16.32■□□□□ 0.2
PRPF18-201ENST00000320054 CCDC129Q6ZRS4 1044 aa16.32■□□□□ 0.2
PRPF18-201ENST00000320054 GPC2Q8N158 579 aa16.32■□□□□ 0.2
PRPF18-201ENST00000320054 RPAP1Q9BWH6 1393 aaPredicted RBP16.32■□□□□ 0.2
PRPF18-201ENST00000320054 LSG1Q9H089 658 aaKnown RBP16.32■□□□□ 0.2
PRPF18-201ENST00000320054 ANO2Q9NQ90 1003 aa16.32■□□□□ 0.2
PRPF18-201ENST00000320054 ZBTB12Q9Y330 459 aaPredicted RBP16.32■□□□□ 0.2
PRPF18-201ENST00000320054 DAGLAQ9Y4D2 1042 aa16.32■□□□□ 0.2
PRPF18-201ENST00000320054 DCAF8L1A6NGE4 600 aa16.31■□□□□ 0.2
PRPF18-201ENST00000320054 USP17L8P0C7I0 530 aa16.31■□□□□ 0.2
PRPF18-201ENST00000320054 PLCG2P16885 1265 aa16.31■□□□□ 0.2
PRPF18-201ENST00000320054 SCNN1DP51172 638 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms