RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 TTLL5Q6EMB2 1281 aa9.69□□□□□ -0.86
CDC42-201ENST00000315554 USP17L1Q7RTZ2 530 aa9.69□□□□□ -0.86
CDC42-201ENST00000315554 FBXO33Q7Z6M2 555 aa9.69□□□□□ -0.86
CDC42-201ENST00000315554 RHPN1Q8TCX5 695 aa9.69□□□□□ -0.86
CDC42-201ENST00000315554 XAGE2Q96GT9 111 aa9.69□□□□□ -0.86
CDC42-201ENST00000315554 DBNDD2Q9BQY9 259 aa9.69□□□□□ -0.86
CDC42-201ENST00000315554 AKAP2Q9Y2D5 859 aa9.69□□□□□ -0.86
CDC42-201ENST00000315554 BOLA1Q9Y3E2 137 aa9.69□□□□□ -0.86
CDC42-201ENST00000315554 FPGT-TNNI3KV9GXZ4 949 aa9.69□□□□□ -0.86
CDC42-201ENST00000315554 F8W031 263 aaPredicted RBP9.68□□□□□ -0.86
CDC42-201ENST00000315554 KIF3CO14782 793 aa9.68□□□□□ -0.86
CDC42-201ENST00000315554 VIL1P09327 827 aaKnown RBP9.68□□□□□ -0.86
CDC42-201ENST00000315554 CHRM1P11229 460 aaPredicted RBP9.68□□□□□ -0.86
CDC42-201ENST00000315554 IL1R1P14778 569 aa9.68□□□□□ -0.86
CDC42-201ENST00000315554 DACT2Q5SW24 774 aa9.68□□□□□ -0.86
CDC42-201ENST00000315554 GORABQ5T7V8 394 aa9.68□□□□□ -0.86
CDC42-201ENST00000315554 RSBN1LQ6PCB5 846 aaPredicted RBP9.68□□□□□ -0.86
CDC42-201ENST00000315554 ZNF687Q8N1G0 1237 aa9.68□□□□□ -0.86
CDC42-201ENST00000315554 TDRD7Q8NHU6 1098 aaKnown RBP9.68□□□□□ -0.86
CDC42-201ENST00000315554 EAF2Q96CJ1 260 aaPredicted RBP9.68□□□□□ -0.86
CDC42-201ENST00000315554 COL1A1P02452 1464 aaPredicted RBP9.68□□□□□ -0.86
CDC42-201ENST00000315554 WDR90Q96KV7 1748 aa9.67□□□□□ -0.86
CDC42-201ENST00000315554 LMOD1P29536 600 aaPredicted RBP9.67□□□□□ -0.86
CDC42-201ENST00000315554 EAPPQ56P03 285 aaPredicted RBP9.67□□□□□ -0.86
CDC42-201ENST00000315554 HSP90AB4PQ58FF6 505 aa9.67□□□□□ -0.86
CDC42-201ENST00000315554 VARS2Q5ST30 1063 aaKnown RBP9.67□□□□□ -0.86
CDC42-201ENST00000315554 RBM26Q5T8P6 1007 aaKnown RBP9.67□□□□□ -0.86
CDC42-201ENST00000315554 CCDC102BQ68D86 513 aa9.67□□□□□ -0.86
CDC42-201ENST00000315554 AACSQ86V21 672 aa9.67□□□□□ -0.86
CDC42-201ENST00000315554 ERC1Q8IUD2 1116 aa9.67□□□□□ -0.86
CDC42-201ENST00000315554 MICALL2Q8IY33 904 aa9.67□□□□□ -0.86
CDC42-201ENST00000315554 CERS5Q8N5B7 392 aa9.67□□□□□ -0.86
CDC42-201ENST00000315554 HACL1Q9UJ83 578 aa9.67□□□□□ -0.86
CDC42-201ENST00000315554 EGFRP00533 1210 aa9.66□□□□□ -0.86
CDC42-201ENST00000315554 IGHDP01880 384 aa9.66□□□□□ -0.86
CDC42-201ENST00000315554 VEGFAP15692 232 aaPredicted RBP9.66□□□□□ -0.86
CDC42-201ENST00000315554 EPHX2P34913 555 aa9.66□□□□□ -0.86
CDC42-201ENST00000315554 GRIK5Q16478 980 aa9.66□□□□□ -0.86
CDC42-201ENST00000315554 STRIP1Q5VSL9 837 aa9.66□□□□□ -0.86
CDC42-201ENST00000315554 PI16Q6UXB8 463 aa9.66□□□□□ -0.86
CDC42-201ENST00000315554 SAMD7Q7Z3H4 446 aa9.66□□□□□ -0.86
CDC42-201ENST00000315554 KIAA0825Q8IV33 1275 aa9.66□□□□□ -0.86
CDC42-201ENST00000315554 KIF1BPQ96EK5 621 aa9.66□□□□□ -0.86
CDC42-201ENST00000315554 TAF1DQ9H5J8 278 aaPredicted RBP9.66□□□□□ -0.86
CDC42-201ENST00000315554 DCTPP1Q9H773 170 aa9.66□□□□□ -0.86
CDC42-201ENST00000315554 GPRC5DQ9NZD1 345 aa9.66□□□□□ -0.86
CDC42-201ENST00000315554 CNOT7Q9UIV1 285 aaKnown RBP9.66□□□□□ -0.86
CDC42-201ENST00000315554 DBNLQ9UJU6 430 aaKnown RBP9.66□□□□□ -0.86
CDC42-201ENST00000315554 IQCA1LA6NCM1 817 aa9.66□□□□□ -0.86
CDC42-201ENST00000315554 RAB11FIP3O75154 756 aa9.66□□□□□ -0.86
CDC42-201ENST00000315554 PSEN1P49768 467 aa9.66□□□□□ -0.86
CDC42-201ENST00000315554 RASGRF1Q13972 1273 aa9.66□□□□□ -0.86
CDC42-201ENST00000315554 SCARF1Q14162 830 aa9.66□□□□□ -0.86
CDC42-201ENST00000315554 TBC1D10BQ4KMP7 808 aaPredicted RBP9.66□□□□□ -0.86
CDC42-201ENST00000315554 MFSD14BQ5SR56 506 aa9.66□□□□□ -0.86
CDC42-201ENST00000315554 TTC39AQ5SRH9 613 aa9.66□□□□□ -0.86
CDC42-201ENST00000315554 C16orf71Q8IYS4 520 aaPredicted RBP9.66□□□□□ -0.86
CDC42-201ENST00000315554 TRPM4Q8TD43 1214 aa9.66□□□□□ -0.86
CDC42-201ENST00000315554 GMLQ99445 158 aa9.66□□□□□ -0.86
CDC42-201ENST00000315554 LRRCC1Q9C099 1032 aa9.66□□□□□ -0.86
CDC42-201ENST00000315554 ZSWIM6Q9HCJ5 1215 aa9.66□□□□□ -0.86
CDC42-201ENST00000315554 GPR108Q9NPR9 543 aa9.66□□□□□ -0.86
CDC42-201ENST00000315554 SNRKQ9NRH2 765 aa9.66□□□□□ -0.86
CDC42-201ENST00000315554 GNL3LQ9NVN8 582 aaKnown RBP9.66□□□□□ -0.86
CDC42-201ENST00000315554 ARAP2Q8WZ64 1704 aa9.65□□□□□ -0.86
CDC42-201ENST00000315554 ZNF646O15015 1829 aaPredicted RBP9.65□□□□□ -0.86
CDC42-201ENST00000315554 FAM205AQ6ZU69 1335 aa9.65□□□□□ -0.86
CDC42-201ENST00000315554 RPS12P25398 132 aaKnown RBP9.65□□□□□ -0.87
CDC42-201ENST00000315554 HDAC1Q13547 482 aaPredicted RBP9.65□□□□□ -0.87
CDC42-201ENST00000315554 B4GALNT3Q6L9W6 998 aa9.65□□□□□ -0.87
CDC42-201ENST00000315554 CLASRPQ8N2M8 674 aaKnown RBP9.65□□□□□ -0.87
CDC42-201ENST00000315554 AGBL3Q8NEM8 1001 aa9.65□□□□□ -0.87
CDC42-201ENST00000315554 DPF2Q92785 391 aa9.65□□□□□ -0.87
CDC42-201ENST00000315554 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.65□□□□□ -0.87
CDC42-201ENST00000315554 PCDHAC2Q9Y5I4 1007 aa9.65□□□□□ -0.87
CDC42-201ENST00000315554 NDUFB9Q9Y6M9 179 aa9.65□□□□□ -0.87
CDC42-201ENST00000315554 ASTN2O75129 1339 aaPredicted RBP9.64□□□□□ -0.87
CDC42-201ENST00000315554 H7C1D1 291 aa9.64□□□□□ -0.87
CDC42-201ENST00000315554 IFIT2P09913 472 aaKnown RBP9.64□□□□□ -0.87
CDC42-201ENST00000315554 USP17L8P0C7I0 530 aa9.64□□□□□ -0.87
CDC42-201ENST00000315554 MCAMP43121 646 aa9.64□□□□□ -0.87
CDC42-201ENST00000315554 HIRAP54198 1017 aaPredicted RBP9.64□□□□□ -0.87
CDC42-201ENST00000315554 NBR1Q14596 966 aa9.64□□□□□ -0.87
CDC42-201ENST00000315554 GSE1Q14687 1217 aa9.64□□□□□ -0.87
CDC42-201ENST00000315554 CCDC158Q5M9N0 1113 aa9.64□□□□□ -0.87
CDC42-201ENST00000315554 ANKRD45Q5TZF3 282 aa9.64□□□□□ -0.87
CDC42-201ENST00000315554 TBC1D9Q6ZT07 1266 aa9.64□□□□□ -0.87
CDC42-201ENST00000315554 RWDD1Q9H446 243 aaPredicted RBP9.64□□□□□ -0.87
CDC42-201ENST00000315554 HMG20BQ9P0W2 317 aa9.64□□□□□ -0.87
CDC42-201ENST00000315554 PSME4Q14997 1843 aa9.63□□□□□ -0.87
CDC42-201ENST00000315554 AAMPQ13685 434 aa9.63□□□□□ -0.87
CDC42-201ENST00000315554 KIF4BQ2VIQ3 1234 aa9.63□□□□□ -0.87
CDC42-201ENST00000315554 TSHZ3Q63HK5 1081 aa9.63□□□□□ -0.87
CDC42-201ENST00000315554 OTUD7AQ8TE49 926 aaPredicted RBP9.63□□□□□ -0.87
CDC42-201ENST00000315554 ADARB2Q9NS39 739 aaKnown RBP9.63□□□□□ -0.87
CDC42-201ENST00000315554 DENND2AQ9ULE3 1009 aa9.63□□□□□ -0.87
CDC42-201ENST00000315554 TTF2Q9UNY4 1162 aaKnown RBP9.63□□□□□ -0.87
CDC42-201ENST00000315554 SCAF8Q9UPN6 1271 aaKnown RBP9.63□□□□□ -0.87
CDC42-201ENST00000315554 AOX1Q06278 1338 aa9.62□□□□□ -0.87
CDC42-201ENST00000315554 MYO3BQ8WXR4 1341 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms