RNA–Protein interactions for RNA: ENST00000314355.6

CKS2-201, Transcript of CDC28 protein kinase regulatory subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS2, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2-201ENST00000314355 LRRFIP2Q9Y608 721 aaKnown RBP15.78■□□□□ 0.12
CKS2-201ENST00000314355 THSD7BQ9C0I4 1608 aa15.78■□□□□ 0.12
CKS2-201ENST00000314355 ALDH1A1P00352 501 aa15.77■□□□□ 0.12
CKS2-201ENST00000314355 HNRNPUQ00839 825 aaKnown RBP eCLIP15.77■□□□□ 0.12
CKS2-201ENST00000314355 MKRN3Q13064 507 aaKnown RBP15.77■□□□□ 0.12
CKS2-201ENST00000314355 OTUD7BQ6GQQ9 843 aa15.77■□□□□ 0.12
CKS2-201ENST00000314355 HOOK2Q96ED9 719 aa15.77■□□□□ 0.12
CKS2-201ENST00000314355 MRIQ9BWK5 157 aa15.77■□□□□ 0.12
CKS2-201ENST00000314355 TM4SF4P48230 202 aa15.76■□□□□ 0.11
CKS2-201ENST00000314355 RFX5P48382 616 aaPredicted RBP15.76■□□□□ 0.11
CKS2-201ENST00000314355 MAP3K11Q16584 847 aa15.76■□□□□ 0.11
CKS2-201ENST00000314355 ATP2B3Q16720 1220 aa15.76■□□□□ 0.11
CKS2-201ENST00000314355 SPDYE2Q495Y8 402 aa15.76■□□□□ 0.11
CKS2-201ENST00000314355 LDLRAD1Q5T700 205 aa15.76■□□□□ 0.11
CKS2-201ENST00000314355 INTS3Q68E01 1043 aaKnown RBP15.76■□□□□ 0.11
CKS2-201ENST00000314355 ANKRD13AQ8IZ07 590 aa15.76■□□□□ 0.11
CKS2-201ENST00000314355 VGLL2Q8N8G2 317 aa15.76■□□□□ 0.11
CKS2-201ENST00000314355 PCDHAC2Q9Y5I4 1007 aa15.76■□□□□ 0.11
CKS2-201ENST00000314355 MANSC4A6NHS7 340 aaPredicted RBP15.75■□□□□ 0.11
CKS2-201ENST00000314355 TCP10L2B9ZVM9 353 aa15.75■□□□□ 0.11
CKS2-201ENST00000314355 FGFR2P21802 821 aa15.75■□□□□ 0.11
CKS2-201ENST00000314355 NBPF12Q5TAG4 269 aaPredicted RBP15.75■□□□□ 0.11
CKS2-201ENST00000314355 ATF7IPQ6VMQ6 1270 aa15.75■□□□□ 0.11
CKS2-201ENST00000314355 MCOLN1Q9GZU1 580 aa15.75■□□□□ 0.11
CKS2-201ENST00000314355 AKAP2Q9Y2D5 859 aa15.75■□□□□ 0.11
CKS2-201ENST00000314355 SRGAP3O43295 1099 aa15.74■□□□□ 0.11
CKS2-201ENST00000314355 ZBTB48P10074 688 aaPredicted RBP15.74■□□□□ 0.11
CKS2-201ENST00000314355 SPRYD7Q5W111 196 aa15.74■□□□□ 0.11
CKS2-201ENST00000314355 HHIPL2Q6UWX4 724 aa15.74■□□□□ 0.11
CKS2-201ENST00000314355 ZGPATQ8N5A5 531 aaKnown RBP15.74■□□□□ 0.11
CKS2-201ENST00000314355 DENND2AQ9ULE3 1009 aa15.74■□□□□ 0.11
CKS2-201ENST00000314355 SEMA3EO15041 775 aa15.73■□□□□ 0.11
CKS2-201ENST00000314355 GNAI2P04899 355 aa15.73■□□□□ 0.11
CKS2-201ENST00000314355 ZKSCAN2Q63HK3 967 aa15.73■□□□□ 0.11
CKS2-201ENST00000314355 ATG9AQ7Z3C6 839 aa15.73■□□□□ 0.11
CKS2-201ENST00000314355 MIER1Q8N108 512 aa15.73■□□□□ 0.11
CKS2-201ENST00000314355 MEIS3Q99687 375 aa15.73■□□□□ 0.11
CKS2-201ENST00000314355 COPRSQ9NQ92 184 aa15.73■□□□□ 0.11
CKS2-201ENST00000314355 AKAP11Q9UKA4 1901 aa15.72■□□□□ 0.11
CKS2-201ENST00000314355 USP2O75604 605 aaPredicted RBP15.72■□□□□ 0.11
CKS2-201ENST00000314355 WDHD1O75717 1129 aaPredicted RBP15.72■□□□□ 0.11
CKS2-201ENST00000314355 TBC1D8O95759 1140 aa15.72■□□□□ 0.11
CKS2-201ENST00000314355 LDHBP07195 334 aaKnown RBP15.72■□□□□ 0.11
CKS2-201ENST00000314355 G3BP1Q13283 466 aaKnown RBP eCLIP15.72■□□□□ 0.11
CKS2-201ENST00000314355 GORABQ5T7V8 394 aa15.72■□□□□ 0.11
CKS2-201ENST00000314355 SLF2Q8IX21 1173 aa15.72■□□□□ 0.11
CKS2-201ENST00000314355 FTSJ3Q8IY81 847 aaKnown RBP15.72■□□□□ 0.11
CKS2-201ENST00000314355 CLUAP1Q96AJ1 413 aa15.72■□□□□ 0.11
CKS2-201ENST00000314355 CSADQ9Y600 493 aa15.72■□□□□ 0.11
CKS2-201ENST00000314355 BCAR3O75815 825 aa15.71■□□□□ 0.11
CKS2-201ENST00000314355 PKN2Q16513 984 aaKnown RBP15.71■□□□□ 0.11
CKS2-201ENST00000314355 CTU1Q7Z7A3 348 aaKnown RBP15.71■□□□□ 0.11
CKS2-201ENST00000314355 ZDHHC15Q96MV8 337 aa15.71■□□□□ 0.11
CKS2-201ENST00000314355 FZD1Q9UP38 647 aa15.71■□□□□ 0.11
CKS2-201ENST00000314355 PA2G4Q9UQ80 394 aaKnown RBP15.71■□□□□ 0.11
CKS2-201ENST00000314355 CASP8AP2Q9UKL3 1982 aa15.7■□□□□ 0.1
CKS2-201ENST00000314355 TRIM27P14373 513 aa15.7■□□□□ 0.1
CKS2-201ENST00000314355 MAP3K9P80192 1104 aa15.7■□□□□ 0.1
CKS2-201ENST00000314355 FKBP1CQ5VVH2 108 aa15.7■□□□□ 0.1
CKS2-201ENST00000314355 DCAF15Q66K64 600 aa15.7■□□□□ 0.1
CKS2-201ENST00000314355 SPTY2D1Q68D10 685 aaPredicted RBP15.7■□□□□ 0.1
CKS2-201ENST00000314355 FAM83AQ86UY5 434 aa15.7■□□□□ 0.1
CKS2-201ENST00000314355 WNK4Q96J92 1243 aa15.7■□□□□ 0.1
CKS2-201ENST00000314355 NEUROD6Q96NK8 337 aa15.7■□□□□ 0.1
CKS2-201ENST00000314355 A0A1B0GUL6 1792 aa15.7■□□□□ 0.1
CKS2-201ENST00000314355 MVPQ14764 893 aaKnown RBP15.69■□□□□ 0.1
CKS2-201ENST00000314355 TMEM39BQ9GZU3 492 aa15.69■□□□□ 0.1
CKS2-201ENST00000314355 GPR25O00155 361 aa15.68■□□□□ 0.1
CKS2-201ENST00000314355 FKTNO75072 461 aa15.68■□□□□ 0.1
CKS2-201ENST00000314355 TIMM10P62072 90 aa15.68■□□□□ 0.1
CKS2-201ENST00000314355 OS9Q13438 667 aaPredicted RBP15.68■□□□□ 0.1
CKS2-201ENST00000314355 NOM1Q5C9Z4 860 aaKnown RBP15.68■□□□□ 0.1
CKS2-201ENST00000314355 IFNL1Q8IU54 200 aa15.68■□□□□ 0.1
CKS2-201ENST00000314355 ZNF296Q8WUU4 475 aaPredicted RBP15.68■□□□□ 0.1
CKS2-201ENST00000314355 CLMNQ96JQ2 1002 aa15.68■□□□□ 0.1
CKS2-201ENST00000314355 ELP3Q9H9T3 547 aa15.68■□□□□ 0.1
CKS2-201ENST00000314355 ZNF646O15015 1829 aaPredicted RBP15.67■□□□□ 0.1
CKS2-201ENST00000314355 A0A1B0GUL7 405 aa15.67■□□□□ 0.1
CKS2-201ENST00000314355 MTX1Q13505 466 aa15.67■□□□□ 0.1
CKS2-201ENST00000314355 GRIK5Q16478 980 aa15.67■□□□□ 0.1
CKS2-201ENST00000314355 CCDC102BQ68D86 513 aa15.67■□□□□ 0.1
CKS2-201ENST00000314355 APOBEC3HQ6NTF7 200 aaKnown RBP15.67■□□□□ 0.1
CKS2-201ENST00000314355 ABCF2Q9UG63 623 aa15.67■□□□□ 0.1
CKS2-201ENST00000314355 MS4A1P11836 297 aa15.66■□□□□ 0.1
CKS2-201ENST00000314355 PHKA1P46020 1223 aa15.66■□□□□ 0.1
CKS2-201ENST00000314355 GTF2A2P52657 109 aa15.66■□□□□ 0.1
CKS2-201ENST00000314355 CACNB3P54284 484 aa15.66■□□□□ 0.1
CKS2-201ENST00000314355 MLLT1Q03111 559 aaPredicted RBP15.66■□□□□ 0.1
CKS2-201ENST00000314355 TFCP2Q12800 502 aa15.66■□□□□ 0.1
CKS2-201ENST00000314355 ARHGEF6Q15052 776 aa15.66■□□□□ 0.1
CKS2-201ENST00000314355 DZIP1Q86YF9 867 aaKnown RBP15.66■□□□□ 0.1
CKS2-201ENST00000314355 OPTNQ96CV9 577 aa15.66■□□□□ 0.1
CKS2-201ENST00000314355 CFHR5Q9BXR6 569 aa15.66■□□□□ 0.1
CKS2-201ENST00000314355 USP40Q9NVE5 1235 aa15.66■□□□□ 0.1
CKS2-201ENST00000314355 ECM29Q5VYK3 1845 aa15.66■□□□□ 0.1
CKS2-201ENST00000314355 AOX1Q06278 1338 aa15.66■□□□□ 0.1
CKS2-201ENST00000314355 SALL1Q9NSC2 1324 aa15.66■□□□□ 0.1
CKS2-201ENST00000314355 ERICH6Q7L0X2 663 aa15.65■□□□□ 0.1
CKS2-201ENST00000314355 TMEM57Q8N5G2 664 aa15.65■□□□□ 0.1
CKS2-201ENST00000314355 FAM151AQ8WW52 585 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms