RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 ITPRIPQ8IWB1 547 aa18.13■□□□□ 0.49
PPP1CA-201ENST00000312989 FTSJ3Q8IY81 847 aaKnown RBP18.13■□□□□ 0.49
PPP1CA-201ENST00000312989 TEPSINQ96N21 525 aa18.13■□□□□ 0.49
PPP1CA-201ENST00000312989 MRIQ9BWK5 157 aa18.13■□□□□ 0.49
PPP1CA-201ENST00000312989 TDRD3Q9H7E2 651 aaKnown RBP18.13■□□□□ 0.49
PPP1CA-201ENST00000312989 ZNF70Q9UC06 446 aaPredicted RBP18.13■□□□□ 0.49
PPP1CA-201ENST00000312989 SUGT1Q9Y2Z0 365 aa18.13■□□□□ 0.49
PPP1CA-201ENST00000312989 SALL1Q9NSC2 1324 aa18.12■□□□□ 0.49
PPP1CA-201ENST00000312989 ECM29Q5VYK3 1845 aa18.12■□□□□ 0.49
PPP1CA-201ENST00000312989 UBE2Q2LH0YL09 131 aa18.12■□□□□ 0.49
PPP1CA-201ENST00000312989 RASGRF1Q13972 1273 aa18.12■□□□□ 0.49
PPP1CA-201ENST00000312989 LDLRAD1Q5T700 205 aa18.12■□□□□ 0.49
PPP1CA-201ENST00000312989 ZDHHC15Q96MV8 337 aa18.12■□□□□ 0.49
PPP1CA-201ENST00000312989 PPP2R3BQ9Y5P8 575 aa18.12■□□□□ 0.49
PPP1CA-201ENST00000312989 PRDX5P30044 214 aa18.11■□□□□ 0.49
PPP1CA-201ENST00000312989 CTCFP49711 727 aaPredicted RBP18.11■□□□□ 0.49
PPP1CA-201ENST00000312989 ZNF157P51786 506 aaPredicted RBP18.11■□□□□ 0.49
PPP1CA-201ENST00000312989 RASA3Q14644 834 aa18.11■□□□□ 0.49
PPP1CA-201ENST00000312989 MAP3K11Q16584 847 aa18.11■□□□□ 0.49
PPP1CA-201ENST00000312989 CEP85Q6P2H3 762 aa18.11■□□□□ 0.49
PPP1CA-201ENST00000312989 XAGE2Q96GT9 111 aa18.11■□□□□ 0.49
PPP1CA-201ENST00000312989 PRDM10Q9NQV6 1147 aa18.11■□□□□ 0.49
PPP1CA-201ENST00000312989 PDS5AQ29RF7 1337 aaKnown RBP18.1■□□□□ 0.49
PPP1CA-201ENST00000312989 SEMA3EO15041 775 aa18.1■□□□□ 0.49
PPP1CA-201ENST00000312989 LBX1P52954 281 aa18.1■□□□□ 0.49
PPP1CA-201ENST00000312989 NBPF12Q5TAG4 269 aaPredicted RBP18.1■□□□□ 0.49
PPP1CA-201ENST00000312989 WDR66Q8TBY9 1149 aa18.1■□□□□ 0.49
PPP1CA-201ENST00000312989 CCDC102AQ96A19 550 aa18.1■□□□□ 0.49
PPP1CA-201ENST00000312989 VEZTQ9HBM0 779 aa18.1■□□□□ 0.49
PPP1CA-201ENST00000312989 RCAN3Q9UKA8 241 aa18.1■□□□□ 0.49
PPP1CA-201ENST00000312989 NOP58Q9Y2X3 529 aaKnown RBP18.1■□□□□ 0.49
PPP1CA-201ENST00000312989 FRAT2O75474 233 aaPredicted RBP18.09■□□□□ 0.49
PPP1CA-201ENST00000312989 RBM5P52756 815 aaKnown RBP eCLIP18.09■□□□□ 0.49
PPP1CA-201ENST00000312989 KIF23Q02241 960 aaPredicted RBP18.09■□□□□ 0.49
PPP1CA-201ENST00000312989 HHIPL2Q6UWX4 724 aa18.09■□□□□ 0.49
PPP1CA-201ENST00000312989 MYO1BO43795 1136 aa18.08■□□□□ 0.49
PPP1CA-201ENST00000312989 MVPQ14764 893 aaKnown RBP18.08■□□□□ 0.49
PPP1CA-201ENST00000312989 DIXDC1Q155Q3 683 aa18.08■□□□□ 0.49
PPP1CA-201ENST00000312989 IFFO2Q5TF58 517 aa18.08■□□□□ 0.49
PPP1CA-201ENST00000312989 ZNF384Q8TF68 577 aa18.08■□□□□ 0.49
PPP1CA-201ENST00000312989 TEKT1Q969V4 418 aa18.08■□□□□ 0.49
PPP1CA-201ENST00000312989 AKAP2Q9Y2D5 859 aa18.08■□□□□ 0.49
PPP1CA-201ENST00000312989 DAGLAQ9Y4D2 1042 aa18.08■□□□□ 0.49
PPP1CA-201ENST00000312989 CACNB3P54284 484 aa18.07■□□□□ 0.48
PPP1CA-201ENST00000312989 AIDAQ96BJ3 306 aa18.07■□□□□ 0.48
PPP1CA-201ENST00000312989 CSRNP1Q96S65 589 aa18.07■□□□□ 0.48
PPP1CA-201ENST00000312989 TSKSQ9UJT2 592 aa18.07■□□□□ 0.48
PPP1CA-201ENST00000312989 DENND2AQ9ULE3 1009 aa18.07■□□□□ 0.48
PPP1CA-201ENST00000312989 RFX7Q2KHR2 1363 aa18.07■□□□□ 0.48
PPP1CA-201ENST00000312989 ARID4AP29374 1257 aaPredicted RBP18.06■□□□□ 0.48
PPP1CA-201ENST00000312989 PRKG1Q13976 671 aa18.06■□□□□ 0.48
PPP1CA-201ENST00000312989 C20orf194Q5TEA3 1177 aa18.06■□□□□ 0.48
PPP1CA-201ENST00000312989 PI16Q6UXB8 463 aa18.06■□□□□ 0.48
PPP1CA-201ENST00000312989 TMEM39BQ9GZU3 492 aa18.06■□□□□ 0.48
PPP1CA-201ENST00000312989 GPR108Q9NPR9 543 aa18.06■□□□□ 0.48
PPP1CA-201ENST00000312989 ZBTB40Q9NUA8 1239 aa18.06■□□□□ 0.48
PPP1CA-201ENST00000312989 HMG20BQ9P0W2 317 aa18.06■□□□□ 0.48
PPP1CA-201ENST00000312989 MAST3O60307 1309 aa18.06■□□□□ 0.48
PPP1CA-201ENST00000312989 TCP10L2B9ZVM9 353 aa18.05■□□□□ 0.48
PPP1CA-201ENST00000312989 USP2O75604 605 aaPredicted RBP18.05■□□□□ 0.48
PPP1CA-201ENST00000312989 NF2P35240 595 aa18.05■□□□□ 0.48
PPP1CA-201ENST00000312989 G3BP1Q13283 466 aaKnown RBP eCLIP18.05■□□□□ 0.485e-6■■■■□ 22.5
PPP1CA-201ENST00000312989 SIRT2Q8IXJ6 389 aa18.05■□□□□ 0.48
PPP1CA-201ENST00000312989 GNL3LQ9NVN8 582 aaKnown RBP18.05■□□□□ 0.48
PPP1CA-201ENST00000312989 ANGEL1Q9UNK9 670 aaKnown RBP18.05■□□□□ 0.48
PPP1CA-201ENST00000312989 COG6Q9Y2V7 657 aa18.05■□□□□ 0.48
PPP1CA-201ENST00000312989 GAKO14976 1311 aa18.05■□□□□ 0.48
PPP1CA-201ENST00000312989 TNNI3KQ59H18 835 aa18.04■□□□□ 0.48
PPP1CA-201ENST00000312989 FKBP1CQ5VVH2 108 aa18.04■□□□□ 0.48
PPP1CA-201ENST00000312989 CLMNQ96JQ2 1002 aa18.04■□□□□ 0.48
PPP1CA-201ENST00000312989 FPGT-TNNI3KV9GXZ4 949 aa18.04■□□□□ 0.48
PPP1CA-201ENST00000312989 CA12O43570 354 aa18.04■□□□□ 0.48
PPP1CA-201ENST00000312989 SURF6O75683 361 aaKnown RBP18.04■□□□□ 0.48
PPP1CA-201ENST00000312989 MCAMP43121 646 aa18.04■□□□□ 0.48
PPP1CA-201ENST00000312989 TNFAIP1Q13829 316 aa18.04■□□□□ 0.48
PPP1CA-201ENST00000312989 ARMC9Q7Z3E5 817 aa18.04■□□□□ 0.48
PPP1CA-201ENST00000312989 DBNDD2Q9BQY9 259 aa18.04■□□□□ 0.48
PPP1CA-201ENST00000312989 RPAP1Q9BWH6 1393 aaPredicted RBP18.03■□□□□ 0.48
PPP1CA-201ENST00000312989 LDHBP07195 334 aaKnown RBP18.03■□□□□ 0.48
PPP1CA-201ENST00000312989 GJA5P36382 358 aa18.03■□□□□ 0.48
PPP1CA-201ENST00000312989 NFIAQ12857 509 aa18.03■□□□□ 0.48
PPP1CA-201ENST00000312989 TTLL12Q14166 644 aaPredicted RBP18.03■□□□□ 0.48
PPP1CA-201ENST00000312989 SUPT20HL1Q3ZLR7 823 aa18.03■□□□□ 0.48
PPP1CA-201ENST00000312989 CDC42EP5Q6NZY7 148 aa18.03■□□□□ 0.48
PPP1CA-201ENST00000312989 FAM83AQ86UY5 434 aa18.03■□□□□ 0.48
PPP1CA-201ENST00000312989 NEUROD6Q96NK8 337 aa18.03■□□□□ 0.48
PPP1CA-201ENST00000312989 RNF186Q9NXI6 227 aa18.03■□□□□ 0.48
PPP1CA-201ENST00000312989 TLR7Q9NYK1 1049 aaKnown RBP18.03■□□□□ 0.48
PPP1CA-201ENST00000312989 DBNLQ9UJU6 430 aaKnown RBP18.03■□□□□ 0.48
PPP1CA-201ENST00000312989 MYH13Q9UKX3 1938 aa18.02■□□□□ 0.48
PPP1CA-201ENST00000312989 SPRYD7Q5W111 196 aa18.02■□□□□ 0.47
PPP1CA-201ENST00000312989 EAF2Q96CJ1 260 aaPredicted RBP18.02■□□□□ 0.47
PPP1CA-201ENST00000312989 FAM163AQ96GL9 167 aaPredicted RBP18.02■□□□□ 0.47
PPP1CA-201ENST00000312989 SAGE1Q9NXZ1 904 aa18.02■□□□□ 0.47
PPP1CA-201ENST00000312989 FAM198AQ9UFP1 575 aa18.02■□□□□ 0.47
PPP1CA-201ENST00000312989 UNCXA6NJT0 531 aa18.01■□□□□ 0.47
PPP1CA-201ENST00000312989 MS4A1P11836 297 aa18.01■□□□□ 0.47
PPP1CA-201ENST00000312989 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.01■□□□□ 0.47
PPP1CA-201ENST00000312989 TNS4Q8IZW8 715 aa18.01■□□□□ 0.47
PPP1CA-201ENST00000312989 SPATA5Q8NB90 893 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms