RNA–Protein interactions for RNA: ENST00000312196.8

MSL3-201, Transcript of MSL complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSL3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-201ENST00000312196 ERO1AQ96HE7 468 aa10.54□□□□□ -0.72
MSL3-201ENST00000312196 ZNF594Q96JF6 807 aaPredicted RBP10.54□□□□□ -0.72
MSL3-201ENST00000312196 PTPN12Q05209 780 aaKnown RBP10.53□□□□□ -0.72
MSL3-201ENST00000312196 WDR66Q8TBY9 1149 aa10.53□□□□□ -0.72
MSL3-201ENST00000312196 SSC5DA1L4H1 1573 aa10.53□□□□□ -0.72
MSL3-201ENST00000312196 SLC5A1P13866 664 aa10.53□□□□□ -0.72
MSL3-201ENST00000312196 IL15P40933 162 aaPredicted RBP10.53□□□□□ -0.72
MSL3-201ENST00000312196 METTL24Q5JXM2 366 aa10.53□□□□□ -0.72
MSL3-201ENST00000312196 FAM83AQ86UY5 434 aa10.53□□□□□ -0.72
MSL3-201ENST00000312196 WNK4Q96J92 1243 aa10.53□□□□□ -0.72
MSL3-201ENST00000312196 PUS3Q9BZE2 481 aaKnown RBP10.53□□□□□ -0.72
MSL3-201ENST00000312196 UBTFL1P0CB47 393 aaPredicted RBP10.52□□□□□ -0.72
MSL3-201ENST00000312196 IREB2P48200 963 aaKnown RBP10.52□□□□□ -0.72
MSL3-201ENST00000312196 TNNI2P48788 182 aa10.52□□□□□ -0.72
MSL3-201ENST00000312196 ATG9AQ7Z3C6 839 aa10.52□□□□□ -0.72
MSL3-201ENST00000312196 IFNL1Q8IU54 200 aa10.52□□□□□ -0.72
MSL3-201ENST00000312196 KIAA0825Q8IV33 1275 aa10.52□□□□□ -0.72
MSL3-201ENST00000312196 HELBQ8NG08 1087 aaPredicted RBP10.52□□□□□ -0.72
MSL3-201ENST00000312196 ARMC5Q96C12 935 aa10.52□□□□□ -0.72
MSL3-201ENST00000312196 SLC10A4Q96EP9 437 aa10.52□□□□□ -0.72
MSL3-201ENST00000312196 ZDHHC15Q96MV8 337 aa10.52□□□□□ -0.72
MSL3-201ENST00000312196 MXD3Q9BW11 206 aa10.52□□□□□ -0.72
MSL3-201ENST00000312196 DEFB129Q9H1M3 183 aa10.52□□□□□ -0.72
MSL3-201ENST00000312196 NOB1Q9ULX3 412 aaKnown RBP10.52□□□□□ -0.72
MSL3-201ENST00000312196 GNRH1P01148 92 aa10.52□□□□□ -0.73
MSL3-201ENST00000312196 PRMT2P55345 433 aa10.52□□□□□ -0.73
MSL3-201ENST00000312196 CDCA7LQ96GN5 454 aa10.52□□□□□ -0.73
MSL3-201ENST00000312196 ZNF70Q9UC06 446 aaPredicted RBP10.52□□□□□ -0.73
MSL3-201ENST00000312196 MYH13Q9UKX3 1938 aa10.52□□□□□ -0.73
MSL3-201ENST00000312196 DLK2Q6UY11 383 aa10.51□□□□□ -0.73
MSL3-201ENST00000312196 ANKRD13AQ8IZ07 590 aa10.51□□□□□ -0.73
MSL3-201ENST00000312196 GNL3LQ9NVN8 582 aaKnown RBP10.51□□□□□ -0.73
MSL3-201ENST00000312196 CRKP46108 304 aa10.51□□□□□ -0.73
MSL3-201ENST00000312196 LRRC24Q50LG9 513 aa10.51□□□□□ -0.73
MSL3-201ENST00000312196 MFSD14BQ5SR56 506 aa10.51□□□□□ -0.73
MSL3-201ENST00000312196 FBXW7Q969H0 707 aa10.51□□□□□ -0.73
MSL3-201ENST00000312196 PRMT6Q96LA8 375 aaPredicted RBP10.51□□□□□ -0.73
MSL3-201ENST00000312196 GYG1P46976 350 aa10.5□□□□□ -0.73
MSL3-201ENST00000312196 TTLL12Q14166 644 aaPredicted RBP10.5□□□□□ -0.73
MSL3-201ENST00000312196 TMED8Q6PL24 325 aaPredicted RBP10.5□□□□□ -0.73
MSL3-201ENST00000312196 DZIP1LQ8IYY4 767 aaKnown RBP10.5□□□□□ -0.73
MSL3-201ENST00000312196 ZGPATQ8N5A5 531 aaKnown RBP10.5□□□□□ -0.73
MSL3-201ENST00000312196 GPR108Q9NPR9 543 aa10.5□□□□□ -0.73
MSL3-201ENST00000312196 NPM3O75607 178 aaKnown RBP10.5□□□□□ -0.73
MSL3-201ENST00000312196 TEKT1Q969V4 418 aa10.5□□□□□ -0.73
MSL3-201ENST00000312196 FAM163AQ96GL9 167 aaPredicted RBP10.5□□□□□ -0.73
MSL3-201ENST00000312196 TEPSINQ96N21 525 aa10.5□□□□□ -0.73
MSL3-201ENST00000312196 CEP126Q9P2H0 1117 aa10.5□□□□□ -0.73
MSL3-201ENST00000312196 DENND2AQ9ULE3 1009 aa10.5□□□□□ -0.73
MSL3-201ENST00000312196 ANGEL1Q9UNK9 670 aaKnown RBP10.5□□□□□ -0.73
MSL3-201ENST00000312196 TTF2Q9UNY4 1162 aaKnown RBP10.5□□□□□ -0.73
MSL3-201ENST00000312196 AKAP2Q9Y2D5 859 aa10.5□□□□□ -0.73
MSL3-201ENST00000312196 COL2A1P02458 1487 aaPredicted RBP10.5□□□□□ -0.73
MSL3-201ENST00000312196 USP2O75604 605 aaPredicted RBP10.49□□□□□ -0.73
MSL3-201ENST00000312196 TBC1D8O95759 1140 aa10.49□□□□□ -0.73
MSL3-201ENST00000312196 OTOFQ9HC10 1997 aa10.49□□□□□ -0.73
MSL3-201ENST00000312196 ATF7IPQ6VMQ6 1270 aa10.49□□□□□ -0.73
MSL3-201ENST00000312196 VPS37DQ86XT2 251 aa10.49□□□□□ -0.73
MSL3-201ENST00000312196 PTPN22Q9Y2R2 807 aa10.49□□□□□ -0.73
MSL3-201ENST00000312196 SNAP23O00161 211 aa10.48□□□□□ -0.73
MSL3-201ENST00000312196 PLIN1O60240 522 aa10.48□□□□□ -0.73
MSL3-201ENST00000312196 GTF2A2P52657 109 aa10.47□□□□□ -0.73
MSL3-201ENST00000312196 RASA3Q14644 834 aa10.47□□□□□ -0.73
MSL3-201ENST00000312196 ATP2B3Q16720 1220 aa10.47□□□□□ -0.73
MSL3-201ENST00000312196 OTOP1Q7RTM1 612 aa10.47□□□□□ -0.73
MSL3-201ENST00000312196 SLF2Q8IX21 1173 aa10.47□□□□□ -0.73
MSL3-201ENST00000312196 ZNF112Q9UJU3 913 aa10.47□□□□□ -0.73
MSL3-201ENST00000312196 GAKO14976 1311 aa10.47□□□□□ -0.73
MSL3-201ENST00000312196 WDHD1O75717 1129 aaPredicted RBP10.47□□□□□ -0.73
MSL3-201ENST00000312196 SOX10P56693 466 aa10.47□□□□□ -0.73
MSL3-201ENST00000312196 MAP3K9P80192 1104 aa10.47□□□□□ -0.73
MSL3-201ENST00000312196 SPTY2D1Q68D10 685 aaPredicted RBP10.47□□□□□ -0.73
MSL3-201ENST00000312196 MOB2Q70IA6 237 aa10.47□□□□□ -0.73
MSL3-201ENST00000312196 ZNF512BQ96KM6 892 aaPredicted RBP10.47□□□□□ -0.73
MSL3-201ENST00000312196 TMOD2Q9NZR1 351 aa10.47□□□□□ -0.73
MSL3-201ENST00000312196 RFX7Q2KHR2 1363 aa10.47□□□□□ -0.73
MSL3-201ENST00000312196 GNAI2P04899 355 aa10.46□□□□□ -0.73
MSL3-201ENST00000312196 BCAMP50895 628 aa10.46□□□□□ -0.73
MSL3-201ENST00000312196 MAP3K10Q02779 954 aa10.46□□□□□ -0.73
MSL3-201ENST00000312196 NOL9Q5SY16 702 aaKnown RBP10.46□□□□□ -0.73
MSL3-201ENST00000312196 DCAF15Q66K64 600 aa10.46□□□□□ -0.73
MSL3-201ENST00000312196 APOBEC3HQ6NTF7 200 aaKnown RBP10.46□□□□□ -0.73
MSL3-201ENST00000312196 FAM151AQ8WW52 585 aa10.46□□□□□ -0.73
MSL3-201ENST00000312196 LRRFIP2Q9Y608 721 aaKnown RBP10.46□□□□□ -0.73
MSL3-201ENST00000312196 ZBED9Q6R2W3 1325 aa10.46□□□□□ -0.74
MSL3-201ENST00000312196 ENTPD3O75355 529 aa10.46□□□□□ -0.74
MSL3-201ENST00000312196 MS4A1P11836 297 aa10.46□□□□□ -0.74
MSL3-201ENST00000312196 POLA2Q14181 598 aa10.46□□□□□ -0.74
MSL3-201ENST00000312196 MVPQ14764 893 aaKnown RBP10.46□□□□□ -0.74
MSL3-201ENST00000312196 ZKSCAN2Q63HK3 967 aa10.46□□□□□ -0.74
MSL3-201ENST00000312196 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.46□□□□□ -0.74
MSL3-201ENST00000312196 MS4A4AQ96JQ5 239 aa10.46□□□□□ -0.74
MSL3-201ENST00000312196 ZFYVE28Q9HCC9 887 aa10.46□□□□□ -0.74
MSL3-201ENST00000312196 MAST2Q6P0Q8 1798 aa10.45□□□□□ -0.74
MSL3-201ENST00000312196 SP3Q02447 781 aa10.45□□□□□ -0.74
MSL3-201ENST00000312196 NBPF12Q5TAG4 269 aaPredicted RBP10.45□□□□□ -0.74
MSL3-201ENST00000312196 IDI2Q9BXS1 227 aa10.45□□□□□ -0.74
MSL3-201ENST00000312196 SPDYE5A6NIY4 337 aa10.45□□□□□ -0.74
MSL3-201ENST00000312196 TRIM27P14373 513 aa10.45□□□□□ -0.74
MSL3-201ENST00000312196 MEIS3Q99687 375 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms