RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 PHKBQ93100 1093 aa29.52■■■□□ 2.32
HOXB3-201ENST00000311626 MYL10Q9BUA6 226 aa29.52■■■□□ 2.32
HOXB3-201ENST00000311626 SPTLC2O15270 562 aa29.51■■■□□ 2.31
HOXB3-201ENST00000311626 PRDM10Q9NQV6 1147 aa29.51■■■□□ 2.31
HOXB3-201ENST00000311626 NAA30Q147X3 362 aaPredicted RBP29.51■■■□□ 2.31
HOXB3-201ENST00000311626 ATL3Q6DD88 541 aa29.51■■■□□ 2.31
HOXB3-201ENST00000311626 SYTL4Q96C24 671 aaPredicted RBP29.51■■■□□ 2.31
HOXB3-201ENST00000311626 PLEKHG2Q9H7P9 1386 aa29.51■■■□□ 2.31
HOXB3-201ENST00000311626 B4E1Z4 1266 aa29.5■■■□□ 2.31
HOXB3-201ENST00000311626 TRIM28Q13263 835 aaKnown RBP29.5■■■□□ 2.31
HOXB3-201ENST00000311626 GIGYF2Q6Y7W6 1299 aaKnown RBP29.5■■■□□ 2.31
HOXB3-201ENST00000311626 WWC3Q9ULE0 1092 aa29.5■■■□□ 2.31
HOXB3-201ENST00000311626 TBC1D2BQ9UPU7 963 aa29.5■■■□□ 2.31
HOXB3-201ENST00000311626 MAP3K15Q6ZN16 1313 aa29.5■■■□□ 2.31
HOXB3-201ENST00000311626 MTERF4Q7Z6M4 381 aaKnown RBP29.5■■■□□ 2.31
HOXB3-201ENST00000311626 CEP57L1Q8IYX8 460 aa29.5■■■□□ 2.31
HOXB3-201ENST00000311626 STK11IPQ8N1F8 1099 aa29.5■■■□□ 2.31
HOXB3-201ENST00000311626 SLC4A9Q96Q91 983 aa29.5■■■□□ 2.31
HOXB3-201ENST00000311626 TRMT1Q9NXH9 659 aaKnown RBP29.5■■■□□ 2.31
HOXB3-201ENST00000311626 SLAIN2Q9P270 581 aa29.5■■■□□ 2.31
HOXB3-201ENST00000311626 IRS4O14654 1257 aaPredicted RBP29.49■■■□□ 2.31
HOXB3-201ENST00000311626 CAVIN2O95810 425 aa29.49■■■□□ 2.31
HOXB3-201ENST00000311626 ADD2P35612 726 aa29.49■■■□□ 2.31
HOXB3-201ENST00000311626 SARM1Q6SZW1 724 aa29.49■■■□□ 2.31
HOXB3-201ENST00000311626 TRMT112Q9UI30 125 aaKnown RBP29.49■■■□□ 2.31
HOXB3-201ENST00000311626 SYNE3Q6ZMZ3 975 aa29.49■■■□□ 2.31
HOXB3-201ENST00000311626 ZNF532Q9HCE3 1301 aa29.49■■■□□ 2.31
HOXB3-201ENST00000311626 STARD3NLO95772 234 aa29.48■■■□□ 2.31
HOXB3-201ENST00000311626 MICU3Q86XE3 530 aa29.48■■■□□ 2.31
HOXB3-201ENST00000311626 FBXL16Q8N461 479 aa29.48■■■□□ 2.31
HOXB3-201ENST00000311626 ANKRD18BA2A2Z9 1011 aa29.48■■■□□ 2.31
HOXB3-201ENST00000311626 DHX16O60231 1041 aaKnown RBP29.48■■■□□ 2.31
HOXB3-201ENST00000311626 CTSWP56202 376 aa29.48■■■□□ 2.31
HOXB3-201ENST00000311626 KIF23Q02241 960 aaPredicted RBP29.48■■■□□ 2.31
HOXB3-201ENST00000311626 PLA2G12BQ9BX93 195 aa29.48■■■□□ 2.31
HOXB3-201ENST00000311626 WDHD1O75717 1129 aaPredicted RBP29.47■■■□□ 2.31
HOXB3-201ENST00000311626 CDC27P30260 824 aa29.47■■■□□ 2.31
HOXB3-201ENST00000311626 CDC25BP30305 580 aa29.47■■■□□ 2.31
HOXB3-201ENST00000311626 PPP4R3BQ5MIZ7 849 aa29.47■■■□□ 2.31
HOXB3-201ENST00000311626 MRFAP1L1Q96HT8 127 aa29.47■■■□□ 2.31
HOXB3-201ENST00000311626 DDX24Q9GZR7 859 aaKnown RBP eCLIP29.47■■■□□ 2.31
HOXB3-201ENST00000311626 ZBTB1Q9Y2K1 713 aa29.47■■■□□ 2.31
HOXB3-201ENST00000311626 CCDC69A6NI79 296 aa29.47■■■□□ 2.31
HOXB3-201ENST00000311626 TRDNQ13061 729 aa29.47■■■□□ 2.31
HOXB3-201ENST00000311626 SKILP12757 684 aa29.46■■■□□ 2.31
HOXB3-201ENST00000311626 KIAA1468Q9P260 1216 aa29.46■■■□□ 2.31
HOXB3-201ENST00000311626 ZNF202O95125 648 aa29.46■■■□□ 2.31
HOXB3-201ENST00000311626 ANO1Q5XXA6 986 aa29.46■■■□□ 2.31
HOXB3-201ENST00000311626 TICAM2Q86XR7 235 aa29.46■■■□□ 2.31
HOXB3-201ENST00000311626 ALG1Q9BT22 464 aa29.46■■■□□ 2.31
HOXB3-201ENST00000311626 NEDD4P46934 1319 aa29.45■■■□□ 2.31
HOXB3-201ENST00000311626 CCDC102BQ68D86 513 aa29.45■■■□□ 2.31
HOXB3-201ENST00000311626 CCDC94Q9BW85 323 aaPredicted RBP29.45■■■□□ 2.31
HOXB3-201ENST00000311626 PAPPAQ13219 1627 aa29.45■■■□□ 2.31
HOXB3-201ENST00000311626 MROH7-TTC4A0A0A0MT08 1334 aa29.45■■■□□ 2.31
HOXB3-201ENST00000311626 SOS2Q07890 1332 aaPredicted RBP29.45■■■□□ 2.31
HOXB3-201ENST00000311626 TOGARAM1Q9Y4F4 1720 aa29.45■■■□□ 2.3
HOXB3-201ENST00000311626 METAP2P50579 478 aaKnown RBP eCLIP29.45■■■□□ 2.3
HOXB3-201ENST00000311626 KCNG4Q8TDN1 519 aa29.45■■■□□ 2.3
HOXB3-201ENST00000311626 POLR3EQ9NVU0 708 aa29.45■■■□□ 2.3
HOXB3-201ENST00000311626 FBXO3Q9UK99 471 aa29.45■■■□□ 2.3
HOXB3-201ENST00000311626 SPEF2Q9C093 1822 aa29.45■■■□□ 2.3
HOXB3-201ENST00000311626 SHANK3Q9BYB0 1731 aa29.45■■■□□ 2.3
HOXB3-201ENST00000311626 MYO5AQ9Y4I1 1855 aaKnown RBP29.45■■■□□ 2.3
HOXB3-201ENST00000311626 A0A0G2JS52 829 aa29.44■■■□□ 2.3
HOXB3-201ENST00000311626 A0A1W2PQ27 194 aa29.44■■■□□ 2.3
HOXB3-201ENST00000311626 A0A1W2PQ64 194 aa29.44■■■□□ 2.3
HOXB3-201ENST00000311626 A0A1W2PQD8 194 aa29.44■■■□□ 2.3
HOXB3-201ENST00000311626 CBX1P83916 185 aa29.44■■■□□ 2.3
HOXB3-201ENST00000311626 PFKFB1P16118 471 aa29.44■■■□□ 2.3
HOXB3-201ENST00000311626 ZRSR1Q15695 479 aaKnown RBP29.44■■■□□ 2.3
HOXB3-201ENST00000311626 VGLL2Q8N8G2 317 aa29.44■■■□□ 2.3
HOXB3-201ENST00000311626 ANGEL1Q9UNK9 670 aaKnown RBP29.44■■■□□ 2.3
HOXB3-201ENST00000311626 PDE6AP16499 860 aa29.43■■■□□ 2.3
HOXB3-201ENST00000311626 CTDSPL2Q05D32 466 aa29.43■■■□□ 2.3
HOXB3-201ENST00000311626 AXDND1Q5T1B0 1012 aaPredicted RBP29.43■■■□□ 2.3
HOXB3-201ENST00000311626 SPDYE4A6NLX3 237 aa29.43■■■□□ 2.3
HOXB3-201ENST00000311626 NBPF11Q86T75 865 aa29.43■■■□□ 2.3
HOXB3-201ENST00000311626 SMC2O95347 1197 aa29.42■■■□□ 2.3
HOXB3-201ENST00000311626 SLC3A2P08195 630 aaKnown RBP29.42■■■□□ 2.3
HOXB3-201ENST00000311626 NFXL1Q6ZNB6 911 aa29.42■■■□□ 2.3
HOXB3-201ENST00000311626 PDE8BO95263 885 aa29.42■■■□□ 2.3
HOXB3-201ENST00000311626 YEATS4O95619 227 aa29.42■■■□□ 2.3
HOXB3-201ENST00000311626 BTG4Q9NY30 223 aa29.42■■■□□ 2.3
HOXB3-201ENST00000311626 SH2B2O14492 632 aaPredicted RBP29.41■■■□□ 2.3
HOXB3-201ENST00000311626 KRT40Q6A162 431 aa29.41■■■□□ 2.3
HOXB3-201ENST00000311626 CHMP4CQ96CF2 233 aa29.41■■■□□ 2.3
HOXB3-201ENST00000311626 CLIC6Q96NY7 704 aa29.41■■■□□ 2.3
HOXB3-201ENST00000311626 CCZ1BP86790 482 aa29.41■■■□□ 2.3
HOXB3-201ENST00000311626 CCZ1P86791 482 aaPredicted RBP29.41■■■□□ 2.3
HOXB3-201ENST00000311626 BRAPQ7Z569 592 aa29.41■■■□□ 2.3
HOXB3-201ENST00000311626 PDCL2Q8N4E4 241 aa29.41■■■□□ 2.3
HOXB3-201ENST00000311626 NAT10Q9H0A0 1025 aaKnown RBP29.41■■■□□ 2.3
HOXB3-201ENST00000311626 IFNKQ9P0W0 207 aa29.41■■■□□ 2.3
HOXB3-201ENST00000311626 TACC3Q9Y6A5 838 aa29.41■■■□□ 2.3
HOXB3-201ENST00000311626 VPS37DQ86XT2 251 aa29.41■■■□□ 2.3
HOXB3-201ENST00000311626 AKAP11Q9UKA4 1901 aa29.4■■■□□ 2.3
HOXB3-201ENST00000311626 CYP19A1P11511 503 aaPredicted RBP29.4■■■□□ 2.3
HOXB3-201ENST00000311626 GNL2Q13823 731 aaKnown RBP29.4■■■□□ 2.3
HOXB3-201ENST00000311626 APOA5Q6Q788 366 aa29.4■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 5367.7 ms