RNA–Protein interactions for RNA: ENST00000310421.4

VCPIP1-201, Transcript of valosin containing protein interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPIP1, Length 9,942 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1-201ENST00000310421 ZMYM4Q5VZL5 1548 aa12.75□□□□□ -0.37
VCPIP1-201ENST00000310421 DTHD1Q6ZMT9 781 aa12.75□□□□□ -0.37
VCPIP1-201ENST00000310421 FBF1Q8TES7 1133 aa12.75□□□□□ -0.37
VCPIP1-201ENST00000310421 STX10O60499 249 aa12.75□□□□□ -0.37
VCPIP1-201ENST00000310421 AFMP43652 599 aa12.75□□□□□ -0.37
VCPIP1-201ENST00000310421 MXRA7P84157 204 aa12.75□□□□□ -0.37
VCPIP1-201ENST00000310421 CCDC110Q8TBZ0 833 aa12.75□□□□□ -0.37
VCPIP1-201ENST00000310421 TBC1D31Q96DN5 1066 aa12.75□□□□□ -0.37
VCPIP1-201ENST00000310421 ESYT1Q9BSJ8 1104 aa12.75□□□□□ -0.37
VCPIP1-201ENST00000310421 SEL1L2Q5TEA6 688 aa12.75□□□□□ -0.37
VCPIP1-201ENST00000310421 CNNM4Q6P4Q7 775 aa12.75□□□□□ -0.37
VCPIP1-201ENST00000310421 CCDC129Q6ZRS4 1044 aa12.75□□□□□ -0.37
VCPIP1-201ENST00000310421 CCDC42Q96M95 316 aa12.75□□□□□ -0.37
VCPIP1-201ENST00000310421 KDM5CP41229 1560 aa12.75□□□□□ -0.37
VCPIP1-201ENST00000310421 UBXN1Q04323 297 aa12.74□□□□□ -0.37
VCPIP1-201ENST00000310421 PUM3Q15397 648 aaKnown RBP12.74□□□□□ -0.37
VCPIP1-201ENST00000310421 MSL1Q68DK7 614 aa12.74□□□□□ -0.37
VCPIP1-201ENST00000310421 MMRN2Q9H8L6 949 aa12.74□□□□□ -0.37
VCPIP1-201ENST00000310421 ATP10BO94823 1461 aa12.74□□□□□ -0.37
VCPIP1-201ENST00000310421 ZSCAN23Q3MJ62 389 aa12.74□□□□□ -0.37
VCPIP1-201ENST00000310421 CFAP58Q5T655 872 aa12.74□□□□□ -0.37
VCPIP1-201ENST00000310421 CCDC65Q8IXS2 484 aa12.74□□□□□ -0.37
VCPIP1-201ENST00000310421 CCDC94Q9BW85 323 aaPredicted RBP12.74□□□□□ -0.37
VCPIP1-201ENST00000310421 SWAP70Q9UH65 585 aa12.74□□□□□ -0.37
VCPIP1-201ENST00000310421 ELP1O95163 1332 aa12.74□□□□□ -0.37
VCPIP1-201ENST00000310421 COPS6Q7L5N1 327 aa12.74□□□□□ -0.37
VCPIP1-201ENST00000310421 IFT74Q96LB3 600 aa12.74□□□□□ -0.37
VCPIP1-201ENST00000310421 RBM8AQ9Y5S9 174 aaKnown RBP12.74□□□□□ -0.37
VCPIP1-201ENST00000310421 TNNC1P63316 161 aa12.74□□□□□ -0.37
VCPIP1-201ENST00000310421 TRAPPC3LQ5T215 181 aa12.74□□□□□ -0.37
VCPIP1-201ENST00000310421 AFAP1L2Q8N4X5 818 aa12.74□□□□□ -0.37
VCPIP1-201ENST00000310421 SMC1BQ8NDV3 1235 aa12.74□□□□□ -0.37
VCPIP1-201ENST00000310421 PARD3Q8TEW0 1356 aa12.74□□□□□ -0.37
VCPIP1-201ENST00000310421 SDSP20132 328 aa12.74□□□□□ -0.37
VCPIP1-201ENST00000310421 SYT1P21579 422 aa12.74□□□□□ -0.37
VCPIP1-201ENST00000310421 TRMT1Q9NXH9 659 aaKnown RBP12.74□□□□□ -0.37
VCPIP1-201ENST00000310421 BACH1O14867 736 aa12.74□□□□□ -0.37
VCPIP1-201ENST00000310421 PDE6BP35913 854 aa12.74□□□□□ -0.37
VCPIP1-201ENST00000310421 ANO6Q4KMQ2 910 aa12.73□□□□□ -0.37
VCPIP1-201ENST00000310421 NOX5Q96PH1 765 aa12.73□□□□□ -0.37
VCPIP1-201ENST00000310421 HELLSQ9NRZ9 838 aa12.73□□□□□ -0.37
VCPIP1-201ENST00000310421 PPP2R5BQ15173 497 aa12.73□□□□□ -0.37
VCPIP1-201ENST00000310421 SLC4A8Q2Y0W8 1093 aa12.73□□□□□ -0.37
VCPIP1-201ENST00000310421 SBNO1A3KN83 1393 aa12.73□□□□□ -0.37
VCPIP1-201ENST00000310421 ATP8B2P98198 1209 aa12.73□□□□□ -0.37
VCPIP1-201ENST00000310421 ERCC6LQ2NKX8 1250 aa12.73□□□□□ -0.37
VCPIP1-201ENST00000310421 HOXB7P09629 217 aa12.73□□□□□ -0.37
VCPIP1-201ENST00000310421 UBL4BQ8N7F7 174 aa12.73□□□□□ -0.37
VCPIP1-201ENST00000310421 CFAP157Q5JU67 520 aa12.73□□□□□ -0.37
VCPIP1-201ENST00000310421 SUPT20HQ8NEM7 779 aa12.73□□□□□ -0.37
VCPIP1-201ENST00000310421 CLASP1Q7Z460 1538 aa12.73□□□□□ -0.37
VCPIP1-201ENST00000310421 INF2Q27J81 1249 aa12.73□□□□□ -0.37
VCPIP1-201ENST00000310421 COL17A1Q9UMD9 1497 aaPredicted RBP12.73□□□□□ -0.37
VCPIP1-201ENST00000310421 INTS4Q96HW7 963 aaKnown RBP12.73□□□□□ -0.37
VCPIP1-201ENST00000310421 IRS4O14654 1257 aaPredicted RBP12.72□□□□□ -0.37
VCPIP1-201ENST00000310421 IQCDQ96DY2 449 aa12.72□□□□□ -0.37
VCPIP1-201ENST00000310421 LIN9Q5TKA1 542 aa12.72□□□□□ -0.37
VCPIP1-201ENST00000310421 TMX3Q96JJ7 454 aa12.72□□□□□ -0.37
VCPIP1-201ENST00000310421 CALUO43852 315 aaPredicted RBP12.72□□□□□ -0.37
VCPIP1-201ENST00000310421 PNMA2Q9UL42 364 aa12.72□□□□□ -0.37
VCPIP1-201ENST00000310421 ZFYVE16Q7Z3T8 1539 aa12.72□□□□□ -0.37
VCPIP1-201ENST00000310421 F8W031 263 aaPredicted RBP12.72□□□□□ -0.37
VCPIP1-201ENST00000310421 CHRNA2Q15822 529 aa12.72□□□□□ -0.37
VCPIP1-201ENST00000310421 KRT222Q8N1A0 295 aa12.72□□□□□ -0.37
VCPIP1-201ENST00000310421 PPP1R7Q15435 360 aa12.72□□□□□ -0.37
VCPIP1-201ENST00000310421 CCDC63Q8NA47 563 aa12.72□□□□□ -0.37
VCPIP1-201ENST00000310421 F13A1P00488 732 aa12.72□□□□□ -0.37
VCPIP1-201ENST00000310421 SKILP12757 684 aa12.72□□□□□ -0.37
VCPIP1-201ENST00000310421 ZBTB16Q05516 673 aa12.72□□□□□ -0.37
VCPIP1-201ENST00000310421 CCDC6Q16204 474 aa12.72□□□□□ -0.37
VCPIP1-201ENST00000310421 SLC5A4Q9NY91 659 aa12.72□□□□□ -0.37
VCPIP1-201ENST00000310421 VAV2P52735 878 aa12.72□□□□□ -0.37
VCPIP1-201ENST00000310421 TRMT1LQ7Z2T5 733 aaKnown RBP12.72□□□□□ -0.37
VCPIP1-201ENST00000310421 SNX21Q969T3 373 aa12.72□□□□□ -0.37
VCPIP1-201ENST00000310421 PANK2Q9BZ23 570 aa12.72□□□□□ -0.37
VCPIP1-201ENST00000310421 GNPATO15228 680 aa12.71□□□□□ -0.37
VCPIP1-201ENST00000310421 TIGD1Q96MW7 591 aa12.71□□□□□ -0.37
VCPIP1-201ENST00000310421 TRIM7Q9C029 511 aa12.71□□□□□ -0.37
VCPIP1-201ENST00000310421 FAM83GA6ND36 823 aa12.71□□□□□ -0.37
VCPIP1-201ENST00000310421 DHX32Q7L7V1 743 aaKnown RBP12.71□□□□□ -0.37
VCPIP1-201ENST00000310421 WDR66Q8TBY9 1149 aa12.71□□□□□ -0.37
VCPIP1-201ENST00000310421 RILPL1Q5EBL4 403 aa12.71□□□□□ -0.37
VCPIP1-201ENST00000310421 CALCOCO2Q13137 446 aa12.71□□□□□ -0.37
VCPIP1-201ENST00000310421 SV2BQ7L1I2 683 aa12.71□□□□□ -0.37
VCPIP1-201ENST00000310421 SRGAP1Q7Z6B7 1085 aa12.71□□□□□ -0.37
VCPIP1-201ENST00000310421 IVNS1ABPQ9Y6Y0 642 aa12.71□□□□□ -0.37
VCPIP1-201ENST00000310421 PLCB3Q01970 1234 aa12.71□□□□□ -0.37
VCPIP1-201ENST00000310421 TAOK1Q7L7X3 1001 aa12.71□□□□□ -0.37
VCPIP1-201ENST00000310421 ATP10AO60312 1499 aa12.71□□□□□ -0.38
VCPIP1-201ENST00000310421 HACE1Q8IYU2 909 aa12.71□□□□□ -0.38
VCPIP1-201ENST00000310421 BEGAINQ9BUH8 593 aa12.71□□□□□ -0.38
VCPIP1-201ENST00000310421 STRN3Q13033 797 aa12.71□□□□□ -0.38
VCPIP1-201ENST00000310421 TUBB2AQ13885 445 aa12.71□□□□□ -0.38
VCPIP1-201ENST00000310421 ZNF830Q96NB3 372 aaPredicted RBP12.71□□□□□ -0.38
VCPIP1-201ENST00000310421 TUBB2BQ9BVA1 445 aa12.71□□□□□ -0.38
VCPIP1-201ENST00000310421 GPHNQ9NQX3 736 aaPredicted RBP12.71□□□□□ -0.38
VCPIP1-201ENST00000310421 TFIP11Q9UBB9 837 aaKnown RBP12.71□□□□□ -0.38
VCPIP1-201ENST00000310421 NOD1Q9Y239 953 aa12.71□□□□□ -0.38
VCPIP1-201ENST00000310421 ARHGEF5Q12774 1597 aa12.71□□□□□ -0.38
VCPIP1-201ENST00000310421 NOP56O00567 594 aaKnown RBP12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms