RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 COA1Q9GZY4 146 aa10.04□□□□□ -0.8
CHD6-201ENST00000309279 SCN9AQ15858 1988 aa10.03□□□□□ -0.8
CHD6-201ENST00000309279 A0A1B0GUL7 405 aa10.03□□□□□ -0.8
CHD6-201ENST00000309279 YDJCA8MPS7 323 aa10.03□□□□□ -0.8
CHD6-201ENST00000309279 SLC5A1P13866 664 aa10.03□□□□□ -0.8
CHD6-201ENST00000309279 IL1R1P14778 569 aa10.03□□□□□ -0.8
CHD6-201ENST00000309279 TIMM10P62072 90 aa10.03□□□□□ -0.8
CHD6-201ENST00000309279 KRBA2Q6ZNG9 492 aa10.03□□□□□ -0.8
CHD6-201ENST00000309279 FBXO33Q7Z6M2 555 aa10.03□□□□□ -0.8
CHD6-201ENST00000309279 RHPN1Q8TCX5 695 aa10.03□□□□□ -0.8
CHD6-201ENST00000309279 RNF25Q96BH1 459 aaPredicted RBP10.03□□□□□ -0.8
CHD6-201ENST00000309279 KIF1BPQ96EK5 621 aa10.03□□□□□ -0.8
CHD6-201ENST00000309279 DBNDD1Q9H9R9 158 aa10.03□□□□□ -0.8
CHD6-201ENST00000309279 ARAP2Q8WZ64 1704 aa10.03□□□□□ -0.8
CHD6-201ENST00000309279 PSME4Q14997 1843 aa10.03□□□□□ -0.8
CHD6-201ENST00000309279 TRIM66O15016 1216 aa10.02□□□□□ -0.81
CHD6-201ENST00000309279 ECE2O60344 883 aa10.02□□□□□ -0.81
CHD6-201ENST00000309279 DOK7Q18PE1 504 aa10.02□□□□□ -0.81
CHD6-201ENST00000309279 TNNI3KQ59H18 835 aa10.02□□□□□ -0.81
CHD6-201ENST00000309279 CAVIN4Q5BKX8 364 aa10.02□□□□□ -0.81
CHD6-201ENST00000309279 ZNF804AQ7Z570 1209 aa10.02□□□□□ -0.81
CHD6-201ENST00000309279 SMC5Q8IY18 1101 aa10.02□□□□□ -0.81
CHD6-201ENST00000309279 RWDD1Q9H446 243 aaPredicted RBP10.02□□□□□ -0.81
CHD6-201ENST00000309279 CD209Q9NNX6 404 aa10.02□□□□□ -0.81
CHD6-201ENST00000309279 IVNS1ABPQ9Y6Y0 642 aa10.02□□□□□ -0.81
CHD6-201ENST00000309279 FPGT-TNNI3KV9GXZ4 949 aa10.02□□□□□ -0.81
CHD6-201ENST00000309279 ZNF609O15014 1411 aa10.02□□□□□ -0.81
CHD6-201ENST00000309279 HIBADHP31937 336 aaKnown RBP10.01□□□□□ -0.81
CHD6-201ENST00000309279 GYG1P46976 350 aa10.01□□□□□ -0.81
CHD6-201ENST00000309279 CXCL9Q07325 125 aa10.01□□□□□ -0.81
CHD6-201ENST00000309279 TDRD7Q8NHU6 1098 aaKnown RBP10.01□□□□□ -0.81
CHD6-201ENST00000309279 EAF2Q96CJ1 260 aaPredicted RBP10.01□□□□□ -0.81
CHD6-201ENST00000309279 GCC1Q96CN9 775 aa10.01□□□□□ -0.81
CHD6-201ENST00000309279 XAGE2Q96GT9 111 aa10.01□□□□□ -0.81
CHD6-201ENST00000309279 GLTPD2A6NH11 291 aa10□□□□□ -0.81
CHD6-201ENST00000309279 G3V3G9 751 aa10□□□□□ -0.81
CHD6-201ENST00000309279 ZNF646O15015 1829 aaPredicted RBP10□□□□□ -0.81
CHD6-201ENST00000309279 IGHDP01880 384 aa10□□□□□ -0.81
CHD6-201ENST00000309279 BCAMP50895 628 aa10□□□□□ -0.81
CHD6-201ENST00000309279 EIF6P56537 245 aaKnown RBP10□□□□□ -0.81
CHD6-201ENST00000309279 DCAF8Q5TAQ9 597 aa10□□□□□ -0.81
CHD6-201ENST00000309279 DPY19L2Q6NUT2 758 aa10□□□□□ -0.81
CHD6-201ENST00000309279 CLASRPQ8N2M8 674 aaKnown RBP10□□□□□ -0.81
CHD6-201ENST00000309279 POM121Q96HA1 1249 aa10□□□□□ -0.81
CHD6-201ENST00000309279 LRRCC1Q9C099 1032 aa10□□□□□ -0.81
CHD6-201ENST00000309279 ZNF541Q9H0D2 1346 aa10□□□□□ -0.81
CHD6-201ENST00000309279 KCNQ5Q9NR82 932 aa10□□□□□ -0.81
CHD6-201ENST00000309279 VIL1P09327 827 aaKnown RBP10□□□□□ -0.81
CHD6-201ENST00000309279 ADORA1P30542 326 aa10□□□□□ -0.81
CHD6-201ENST00000309279 TNIP1Q15025 636 aa10□□□□□ -0.81
CHD6-201ENST00000309279 VPS37DQ86XT2 251 aa10□□□□□ -0.81
CHD6-201ENST00000309279 GPC2Q8N158 579 aa10□□□□□ -0.81
CHD6-201ENST00000309279 NEUROD6Q96NK8 337 aa10□□□□□ -0.81
CHD6-201ENST00000309279 IL1RAPL2Q9NP60 686 aa10□□□□□ -0.81
CHD6-201ENST00000309279 KLHL42Q9P2K6 505 aa10□□□□□ -0.81
CHD6-201ENST00000309279 CIZ1Q9ULV3 898 aaPredicted RBP10□□□□□ -0.81
CHD6-201ENST00000309279 FAM205AQ6ZU69 1335 aa9.99□□□□□ -0.81
CHD6-201ENST00000309279 USP17L3A6NCW0 530 aa9.99□□□□□ -0.81
CHD6-201ENST00000309279 USP17L4A6NCW7 530 aa9.99□□□□□ -0.81
CHD6-201ENST00000309279 PSMD14O00487 310 aa9.99□□□□□ -0.81
CHD6-201ENST00000309279 RAD17O75943 681 aa9.99□□□□□ -0.81
CHD6-201ENST00000309279 CCDC181Q5TID7 509 aa9.99□□□□□ -0.81
CHD6-201ENST00000309279 STRIP1Q5VSL9 837 aa9.99□□□□□ -0.81
CHD6-201ENST00000309279 CCDC102BQ68D86 513 aa9.99□□□□□ -0.81
CHD6-201ENST00000309279 CIAPIN1Q6FI81 312 aa9.99□□□□□ -0.81
CHD6-201ENST00000309279 USP17L1Q7RTZ2 530 aa9.99□□□□□ -0.81
CHD6-201ENST00000309279 SDR16C5Q8N3Y7 309 aa9.99□□□□□ -0.81
CHD6-201ENST00000309279 L3MBTL3Q96JM7 780 aaPredicted RBP9.99□□□□□ -0.81
CHD6-201ENST00000309279 DBNLQ9UJU6 430 aaKnown RBP9.99□□□□□ -0.81
CHD6-201ENST00000309279 MYH13Q9UKX3 1938 aa9.98□□□□□ -0.81
CHD6-201ENST00000309279 CREB3O43889 395 aa9.98□□□□□ -0.81
CHD6-201ENST00000309279 DDNO94850 711 aaPredicted RBP9.98□□□□□ -0.81
CHD6-201ENST00000309279 YY1P25490 414 aa9.98□□□□□ -0.81
CHD6-201ENST00000309279 PHKA1P46020 1223 aa9.98□□□□□ -0.81
CHD6-201ENST00000309279 DACT2Q5SW24 774 aa9.98□□□□□ -0.81
CHD6-201ENST00000309279 TTLL5Q6EMB2 1281 aa9.98□□□□□ -0.81
CHD6-201ENST00000309279 AACSQ86V21 672 aa9.98□□□□□ -0.81
CHD6-201ENST00000309279 ZNF512BQ96KM6 892 aaPredicted RBP9.98□□□□□ -0.81
CHD6-201ENST00000309279 DBNDD2Q9BQY9 259 aa9.98□□□□□ -0.81
CHD6-201ENST00000309279 CCDC8Q9H0W5 538 aaPredicted RBP9.98□□□□□ -0.81
CHD6-201ENST00000309279 GNL3LQ9NVN8 582 aaKnown RBP9.98□□□□□ -0.81
CHD6-201ENST00000309279 MAGEC2Q9UBF1 373 aaPredicted RBP9.98□□□□□ -0.81
CHD6-201ENST00000309279 AKAP11Q9UKA4 1901 aa9.98□□□□□ -0.81
CHD6-201ENST00000309279 WDR90Q96KV7 1748 aa9.97□□□□□ -0.81
CHD6-201ENST00000309279 PDS5AQ29RF7 1337 aaKnown RBP9.97□□□□□ -0.81
CHD6-201ENST00000309279 KDM2BQ8NHM5 1336 aa9.97□□□□□ -0.81
CHD6-201ENST00000309279 ARID4AP29374 1257 aaPredicted RBP9.97□□□□□ -0.81
CHD6-201ENST00000309279 FKBP1AP62942 108 aaKnown RBP9.97□□□□□ -0.81
CHD6-201ENST00000309279 GTF2IP78347 998 aa9.97□□□□□ -0.81
CHD6-201ENST00000309279 ZFYVE27Q5T4F4 411 aa9.97□□□□□ -0.81
CHD6-201ENST00000309279 MAMSTRQ6ZN01 415 aa9.97□□□□□ -0.81
CHD6-201ENST00000309279 GMLQ99445 158 aa9.97□□□□□ -0.81
CHD6-201ENST00000309279 TLR7Q9NYK1 1049 aaKnown RBP9.97□□□□□ -0.81
CHD6-201ENST00000309279 SCN4AP35499 1836 aa9.97□□□□□ -0.81
CHD6-201ENST00000309279 POTECB2RU33 542 aa9.96□□□□□ -0.81
CHD6-201ENST00000309279 IFIT2P09913 472 aaKnown RBP9.96□□□□□ -0.81
CHD6-201ENST00000309279 RPS12P25398 132 aaKnown RBP9.96□□□□□ -0.81
CHD6-201ENST00000309279 MMP14P50281 582 aa9.96□□□□□ -0.81
CHD6-201ENST00000309279 CCDC158Q5M9N0 1113 aa9.96□□□□□ -0.81
CHD6-201ENST00000309279 ANKRD45Q5TZF3 282 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms