RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 GRIK5Q16478 980 aa6.95□□□□□ -1.3
CKS1B-201ENST00000308987 WAPLQ7Z5K2 1190 aa6.95□□□□□ -1.3
CKS1B-201ENST00000308987 GSX2Q9BZM3 304 aa6.95□□□□□ -1.3
CKS1B-201ENST00000308987 EFCC1Q9HA90 598 aa6.95□□□□□ -1.3
CKS1B-201ENST00000308987 TRPC5Q9UL62 973 aaPredicted RBP6.95□□□□□ -1.3
CKS1B-201ENST00000308987 RNF114Q9Y508 228 aa6.95□□□□□ -1.3
CKS1B-201ENST00000308987 SLIT2O94813 1529 aa6.95□□□□□ -1.3
CKS1B-201ENST00000308987 TECPR2O15040 1411 aa6.94□□□□□ -1.3
CKS1B-201ENST00000308987 SPATA31E1Q6ZUB1 1445 aa6.94□□□□□ -1.3
CKS1B-201ENST00000308987 RALGAPBQ86X10 1494 aa6.94□□□□□ -1.3
CKS1B-201ENST00000308987 NWD2Q9ULI1 1742 aa6.94□□□□□ -1.3
CKS1B-201ENST00000308987 FOXO3O43524 673 aa6.94□□□□□ -1.3
CKS1B-201ENST00000308987 HIRAP54198 1017 aaPredicted RBP6.94□□□□□ -1.3
CKS1B-201ENST00000308987 PSMA6P60900 246 aaKnown RBP6.94□□□□□ -1.3
CKS1B-201ENST00000308987 DZIP1LQ8IYY4 767 aaKnown RBP6.94□□□□□ -1.3
CKS1B-201ENST00000308987 KIF1AQ12756 1690 aa6.93□□□□□ -1.3
CKS1B-201ENST00000308987 NRAPQ86VF7 1730 aa6.93□□□□□ -1.3
CKS1B-201ENST00000308987 SKIP12755 728 aa6.93□□□□□ -1.3
CKS1B-201ENST00000308987 WASHC4Q2M389 1173 aa6.93□□□□□ -1.3
CKS1B-201ENST00000308987 TMEM132EQ6IEE7 984 aa6.93□□□□□ -1.3
CKS1B-201ENST00000308987 BTLAQ7Z6A9 289 aa6.93□□□□□ -1.3
CKS1B-201ENST00000308987 FAM35AQ86V20 835 aa6.93□□□□□ -1.3
CKS1B-201ENST00000308987 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.93□□□□□ -1.3
CKS1B-201ENST00000308987 RPGRIP1LQ68CZ1 1315 aa6.93□□□□□ -1.3
CKS1B-201ENST00000308987 NPHP3Q7Z494 1330 aa6.93□□□□□ -1.3
CKS1B-201ENST00000308987 UTRNP46939 3433 aa6.93□□□□□ -1.3
CKS1B-201ENST00000308987 DHX57Q6P158 1386 aaKnown RBP6.93□□□□□ -1.3
CKS1B-201ENST00000308987 TRPM3Q9HCF6 1732 aaPredicted RBP6.93□□□□□ -1.3
CKS1B-201ENST00000308987 LZTS3O60299 673 aaPredicted RBP6.92□□□□□ -1.3
CKS1B-201ENST00000308987 DEAF1O75398 565 aaPredicted RBP6.92□□□□□ -1.3
CKS1B-201ENST00000308987 CPB1P15086 417 aa6.92□□□□□ -1.3
CKS1B-201ENST00000308987 SOX11P35716 441 aa6.92□□□□□ -1.3
CKS1B-201ENST00000308987 GP2P55259 537 aaKnown RBP6.92□□□□□ -1.3
CKS1B-201ENST00000308987 PLAURQ03405 335 aa6.92□□□□□ -1.3
CKS1B-201ENST00000308987 DEFB132Q7Z7B7 95 aa6.92□□□□□ -1.3
CKS1B-201ENST00000308987 WFDC8Q8IUA0 241 aa6.92□□□□□ -1.3
CKS1B-201ENST00000308987 PNMA5Q96PV4 448 aa6.92□□□□□ -1.3
CKS1B-201ENST00000308987 TSPAN10Q9H1Z9 355 aaPredicted RBP6.92□□□□□ -1.3
CKS1B-201ENST00000308987 STK26Q9P289 416 aa6.92□□□□□ -1.3
CKS1B-201ENST00000308987 SPATA31A3Q5VYP0 1347 aa6.92□□□□□ -1.3
CKS1B-201ENST00000308987 CRYBG1Q9Y4K1 1723 aa6.92□□□□□ -1.3
CKS1B-201ENST00000308987 LRPPRCP42704 1394 aaKnown RBP6.92□□□□□ -1.3
CKS1B-201ENST00000308987 ALS2Q96Q42 1657 aa6.91□□□□□ -1.3
CKS1B-201ENST00000308987 ALX3O95076 343 aa6.91□□□□□ -1.3
CKS1B-201ENST00000308987 NFKB1P19838 968 aa6.91□□□□□ -1.3
CKS1B-201ENST00000308987 NCOA4Q13772 614 aa6.91□□□□□ -1.3
CKS1B-201ENST00000308987 LPIN3Q9BQK8 851 aa6.91□□□□□ -1.3
CKS1B-201ENST00000308987 AKTIPQ9H8T0 292 aa6.91□□□□□ -1.3
CKS1B-201ENST00000308987 CHMP3Q9Y3E7 222 aa6.91□□□□□ -1.3
CKS1B-201ENST00000308987 ABCC11Q96J66 1382 aa6.91□□□□□ -1.3
CKS1B-201ENST00000308987 PIK3C2GO75747 1445 aa6.91□□□□□ -1.3
CKS1B-201ENST00000308987 LRP5O75197 1615 aa6.9□□□□□ -1.3
CKS1B-201ENST00000308987 DLL1O00548 723 aa6.9□□□□□ -1.3
CKS1B-201ENST00000308987 CCINQ13939 588 aa6.9□□□□□ -1.3
CKS1B-201ENST00000308987 RGL3Q3MIN7 710 aa6.9□□□□□ -1.3
CKS1B-201ENST00000308987 PERM1Q5SV97 790 aa6.9□□□□□ -1.3
CKS1B-201ENST00000308987 UNC5CLQ8IV45 518 aa6.9□□□□□ -1.3
CKS1B-201ENST00000308987 FRRS1LQ9P0K9 344 aa6.9□□□□□ -1.3
CKS1B-201ENST00000308987 YTHDC2Q9H6S0 1430 aaKnown RBP6.9□□□□□ -1.31
CKS1B-201ENST00000308987 TNS1Q9HBL0 1735 aaKnown RBP6.9□□□□□ -1.31
CKS1B-201ENST00000308987 KIAA1324LA8MWY0 1029 aaPredicted RBP6.89□□□□□ -1.31
CKS1B-201ENST00000308987 ZBTB7BO15156 539 aaPredicted RBP6.89□□□□□ -1.31
CKS1B-201ENST00000308987 PCSK7Q16549 785 aa6.89□□□□□ -1.31
CKS1B-201ENST00000308987 KRT28Q7Z3Y7 464 aa6.89□□□□□ -1.31
CKS1B-201ENST00000308987 KRTAP4-9Q9BYQ8 210 aa6.89□□□□□ -1.31
CKS1B-201ENST00000308987 BLMP54132 1417 aaPredicted RBP6.89□□□□□ -1.31
CKS1B-201ENST00000308987 NRXN1Q9ULB1 1477 aa6.89□□□□□ -1.31
CKS1B-201ENST00000308987 CCDC144AA2RUR9 1427 aa6.88□□□□□ -1.31
CKS1B-201ENST00000308987 TNS3Q68CZ2 1445 aa6.88□□□□□ -1.31
CKS1B-201ENST00000308987 ZBTB42B2RXF5 422 aa6.88□□□□□ -1.31
CKS1B-201ENST00000308987 ELMSAN1Q6PJG2 1045 aa6.88□□□□□ -1.31
CKS1B-201ENST00000308987 ALDH16A1Q8IZ83 802 aa6.88□□□□□ -1.31
CKS1B-201ENST00000308987 DEPDC4Q8N2C3 294 aa6.88□□□□□ -1.31
CKS1B-201ENST00000308987 TMEM130Q8N3G9 435 aa6.88□□□□□ -1.31
CKS1B-201ENST00000308987 TPCN2Q8NHX9 752 aa6.88□□□□□ -1.31
CKS1B-201ENST00000308987 TTC9Q92623 222 aa6.88□□□□□ -1.31
CKS1B-201ENST00000308987 RGPD1P0DJD0 1748 aa6.87□□□□□ -1.31
CKS1B-201ENST00000308987 FAM83GA6ND36 823 aa6.87□□□□□ -1.31
CKS1B-201ENST00000308987 ADAMTS4O75173 837 aa6.87□□□□□ -1.31
CKS1B-201ENST00000308987 TGFB1P01137 390 aa6.87□□□□□ -1.31
CKS1B-201ENST00000308987 VPS72Q15906 364 aa6.87□□□□□ -1.31
CKS1B-201ENST00000308987 TPRNQ4KMQ1 711 aa6.87□□□□□ -1.31
CKS1B-201ENST00000308987 NFATC2IPQ8NCF5 419 aa6.87□□□□□ -1.31
CKS1B-201ENST00000308987 TIMELESSQ9UNS1 1208 aa6.87□□□□□ -1.31
CKS1B-201ENST00000308987 THSD7AQ9UPZ6 1657 aa6.87□□□□□ -1.31
CKS1B-201ENST00000308987 ADGRB2O60241 1585 aa6.86□□□□□ -1.31
CKS1B-201ENST00000308987 ANKRD30BQ9BXX2 1392 aa6.86□□□□□ -1.31
CKS1B-201ENST00000308987 F8W735 103 aaPredicted RBP6.86□□□□□ -1.31
CKS1B-201ENST00000308987 PPP1R12BO60237 982 aaPredicted RBP6.86□□□□□ -1.31
CKS1B-201ENST00000308987 PTCD1O75127 700 aaKnown RBP6.86□□□□□ -1.31
CKS1B-201ENST00000308987 MAP3K6O95382 1288 aa6.86□□□□□ -1.31
CKS1B-201ENST00000308987 IGLV1-40P01703 118 aa6.86□□□□□ -1.31
CKS1B-201ENST00000308987 CFAP70Q5T0N1 1121 aa6.86□□□□□ -1.31
CKS1B-201ENST00000308987 CCDC102BQ68D86 513 aa6.86□□□□□ -1.31
CKS1B-201ENST00000308987 WWC1Q8IX03 1113 aa6.86□□□□□ -1.31
CKS1B-201ENST00000308987 MPHOSPH9Q99550 1183 aa6.86□□□□□ -1.31
CKS1B-201ENST00000308987 C14orf93Q9H972 538 aaKnown RBP6.86□□□□□ -1.31
CKS1B-201ENST00000308987 KIAA1024Q9UPX6 916 aa6.86□□□□□ -1.31
CKS1B-201ENST00000308987 RAXQ9Y2V3 346 aa6.86□□□□□ -1.31
CKS1B-201ENST00000308987 COL14A1Q05707 1796 aaKnown RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms