RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 GYG1P46976 350 aa14.14□□□□□ -0.15
TRIM40-205ENST00000307859 MAP3K12Q12852 859 aa14.14□□□□□ -0.15
TRIM40-205ENST00000307859 TIAM2Q8IVF5 1701 aa14.14□□□□□ -0.15
TRIM40-205ENST00000307859 GBP4Q96PP9 640 aa14.14□□□□□ -0.15
TRIM40-205ENST00000307859 PDS5AQ29RF7 1337 aaKnown RBP14.13□□□□□ -0.15
TRIM40-205ENST00000307859 IRS2Q9Y4H2 1338 aa14.13□□□□□ -0.15
TRIM40-205ENST00000307859 WTIPA6NIX2 430 aaPredicted RBP14.13□□□□□ -0.15
TRIM40-205ENST00000307859 DDX11L8A8MPP1 907 aa14.13□□□□□ -0.15
TRIM40-205ENST00000307859 SEMA3EO15041 775 aa14.13□□□□□ -0.15
TRIM40-205ENST00000307859 HMGB1P09429 215 aaKnown RBP14.13□□□□□ -0.15
TRIM40-205ENST00000307859 PKP1Q13835 747 aa14.13□□□□□ -0.15
TRIM40-205ENST00000307859 TOB2Q14106 344 aaPredicted RBP14.13□□□□□ -0.15
TRIM40-205ENST00000307859 CAVIN4Q5BKX8 364 aa14.13□□□□□ -0.15
TRIM40-205ENST00000307859 FBXO33Q7Z6M2 555 aa14.13□□□□□ -0.15
TRIM40-205ENST00000307859 FAM84BQ96KN1 310 aaPredicted RBP14.13□□□□□ -0.15
TRIM40-205ENST00000307859 TPCN1Q9ULQ1 816 aa14.12□□□□□ -0.15
TRIM40-205ENST00000307859 ZDHHC9Q9Y397 364 aa14.12□□□□□ -0.15
TRIM40-205ENST00000307859 A0A0G2JLW4 131 aa14.12□□□□□ -0.15
TRIM40-205ENST00000307859 FGAP02671 866 aa14.12□□□□□ -0.15
TRIM40-205ENST00000307859 ST3GAL1Q11201 340 aa14.12□□□□□ -0.15
TRIM40-205ENST00000307859 ME3Q16798 604 aa14.12□□□□□ -0.15
TRIM40-205ENST00000307859 TTLL5Q6EMB2 1281 aa14.12□□□□□ -0.15
TRIM40-205ENST00000307859 MAGEB6Q8N7X4 407 aa14.12□□□□□ -0.15
TRIM40-205ENST00000307859 LARP6Q9BRS8 491 aaKnown RBP14.12□□□□□ -0.15
TRIM40-205ENST00000307859 DENND2AQ9ULE3 1009 aa14.12□□□□□ -0.15
TRIM40-205ENST00000307859 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.12□□□□□ -0.15
TRIM40-205ENST00000307859 ZMYM6O95789 1325 aa14.11□□□□□ -0.15
TRIM40-205ENST00000307859 BAZ2AQ9UIF9 1905 aaKnown RBP14.11□□□□□ -0.15
TRIM40-205ENST00000307859 KLRG2A4D1S0 409 aaPredicted RBP14.11□□□□□ -0.15
TRIM40-205ENST00000307859 E7EWF7 191 aa14.11□□□□□ -0.15
TRIM40-205ENST00000307859 KLRK1P26718 216 aa14.11□□□□□ -0.15
TRIM40-205ENST00000307859 TGFB2P61812 414 aa14.11□□□□□ -0.15
TRIM40-205ENST00000307859 IMMTQ16891 758 aaKnown RBP14.11□□□□□ -0.15
TRIM40-205ENST00000307859 DHX32Q7L7V1 743 aaKnown RBP14.11□□□□□ -0.15
TRIM40-205ENST00000307859 SMC1BQ8NDV3 1235 aa14.11□□□□□ -0.15
TRIM40-205ENST00000307859 RPGRQ92834 1020 aaKnown RBP14.11□□□□□ -0.15
TRIM40-205ENST00000307859 TCEANC2Q96MN5 208 aa14.11□□□□□ -0.15
TRIM40-205ENST00000307859 STRBPQ96SI9 672 aaKnown RBP14.11□□□□□ -0.15
TRIM40-205ENST00000307859 DUOX1Q9NRD9 1551 aa14.11□□□□□ -0.15
TRIM40-205ENST00000307859 LAMB1P07942 1786 aa14.1□□□□□ -0.15
TRIM40-205ENST00000307859 BRD1O95696 1058 aa14.1□□□□□ -0.15
TRIM40-205ENST00000307859 HOXA10P31260 410 aaPredicted RBP14.1□□□□□ -0.15
TRIM40-205ENST00000307859 ALX1Q15699 326 aa14.1□□□□□ -0.15
TRIM40-205ENST00000307859 NLGN1Q8N2Q7 840 aa14.1□□□□□ -0.15
TRIM40-205ENST00000307859 AGXT2Q9BYV1 514 aa14.1□□□□□ -0.15
TRIM40-205ENST00000307859 LEMD3Q9Y2U8 911 aa14.1□□□□□ -0.15
TRIM40-205ENST00000307859 BAG4O95429 457 aaKnown RBP14.09□□□□□ -0.15
TRIM40-205ENST00000307859 HIBADHP31937 336 aaKnown RBP14.09□□□□□ -0.15
TRIM40-205ENST00000307859 EXOSC10Q01780 885 aaKnown RBP14.09□□□□□ -0.15
TRIM40-205ENST00000307859 VPS37DQ86XT2 251 aa14.09□□□□□ -0.15
TRIM40-205ENST00000307859 CCDC83Q8IWF9 413 aa14.09□□□□□ -0.15
TRIM40-205ENST00000307859 AIDAQ96BJ3 306 aa14.09□□□□□ -0.15
TRIM40-205ENST00000307859 RBM17Q96I25 401 aaKnown RBP14.09□□□□□ -0.15
TRIM40-205ENST00000307859 LRP2BPQ9P2M1 347 aa14.09□□□□□ -0.15
TRIM40-205ENST00000307859 IQSEC3Q9UPP2 1182 aaPredicted RBP14.09□□□□□ -0.15
TRIM40-205ENST00000307859 XDHP47989 1333 aa14.09□□□□□ -0.15
TRIM40-205ENST00000307859 Q6ZUG5 572 aa14.08□□□□□ -0.15
TRIM40-205ENST00000307859 ARHGAP27Q6ZUM4 889 aa14.08□□□□□ -0.15
TRIM40-205ENST00000307859 C15orf52Q6ZUT6 534 aaKnown RBP14.08□□□□□ -0.15
TRIM40-205ENST00000307859 FBXL16Q8N461 479 aa14.08□□□□□ -0.15
TRIM40-205ENST00000307859 CRAMP1Q96RY5 1269 aa14.08□□□□□ -0.15
TRIM40-205ENST00000307859 CDK5RAP2Q96SN8 1893 aa14.08□□□□□ -0.16
TRIM40-205ENST00000307859 MYH2Q9UKX2 1941 aa14.08□□□□□ -0.16
TRIM40-205ENST00000307859 MBD4O95243 580 aa14.08□□□□□ -0.16
TRIM40-205ENST00000307859 GNAT2P19087 354 aa14.08□□□□□ -0.16
TRIM40-205ENST00000307859 PTMSP20962 102 aa14.08□□□□□ -0.16
TRIM40-205ENST00000307859 SMC3Q9UQE7 1217 aa14.08□□□□□ -0.16
TRIM40-205ENST00000307859 BCS1LQ9Y276 419 aa14.08□□□□□ -0.16
TRIM40-205ENST00000307859 MYH15Q9Y2K3 1946 aa14.07□□□□□ -0.16
TRIM40-205ENST00000307859 PATL2C9JE40 543 aaKnown RBP14.07□□□□□ -0.16
TRIM40-205ENST00000307859 ZNF213O14771 459 aa14.07□□□□□ -0.16
TRIM40-205ENST00000307859 BBOX1O75936 387 aa14.07□□□□□ -0.16
TRIM40-205ENST00000307859 HAND2P61296 217 aa14.07□□□□□ -0.16
TRIM40-205ENST00000307859 C9orf131Q5VYM1 1079 aa14.07□□□□□ -0.16
TRIM40-205ENST00000307859 TXNRD3Q86VQ6 643 aa14.07□□□□□ -0.16
TRIM40-205ENST00000307859 NECAB1Q8N987 351 aa14.07□□□□□ -0.16
TRIM40-205ENST00000307859 NBPF3Q9H094 633 aa14.07□□□□□ -0.16
TRIM40-205ENST00000307859 WDR19Q8NEZ3 1342 aa14.07□□□□□ -0.16
TRIM40-205ENST00000307859 WDR33Q9C0J8 1336 aaKnown RBP14.07□□□□□ -0.16
TRIM40-205ENST00000307859 TMED8Q6PL24 325 aaPredicted RBP14.06□□□□□ -0.16
TRIM40-205ENST00000307859 TMC4Q7Z404 712 aa14.06□□□□□ -0.16
TRIM40-205ENST00000307859 SLC51AQ86UW1 340 aa14.06□□□□□ -0.16
TRIM40-205ENST00000307859 MB21D2Q8IYB1 491 aaPredicted RBP14.06□□□□□ -0.16
TRIM40-205ENST00000307859 BRIP1Q9BX63 1249 aa14.06□□□□□ -0.16
TRIM40-205ENST00000307859 ARMT1Q9H993 441 aa14.06□□□□□ -0.16
TRIM40-205ENST00000307859 EPB41L4AQ9HCS5 686 aaPredicted RBP14.06□□□□□ -0.16
TRIM40-205ENST00000307859 ANKIB1Q9P2G1 1089 aa14.06□□□□□ -0.16
TRIM40-205ENST00000307859 ABCF2Q9UG63 623 aa14.06□□□□□ -0.16
TRIM40-205ENST00000307859 IGSF3O75054 1194 aa14.05□□□□□ -0.16
TRIM40-205ENST00000307859 CYP7A1P22680 504 aa14.05□□□□□ -0.16
TRIM40-205ENST00000307859 GPSM2P81274 684 aa14.05□□□□□ -0.16
TRIM40-205ENST00000307859 ADGRA1Q86SQ6 560 aa14.05□□□□□ -0.16
TRIM40-205ENST00000307859 IFNL3Q8IZI9 196 aa14.05□□□□□ -0.16
TRIM40-205ENST00000307859 LCORLQ8N3X6 602 aa14.05□□□□□ -0.16
TRIM40-205ENST00000307859 NCOA7Q8NI08 942 aa14.05□□□□□ -0.16
TRIM40-205ENST00000307859 BRF1Q92994 677 aa14.05□□□□□ -0.16
TRIM40-205ENST00000307859 GTF3C6Q969F1 213 aa14.05□□□□□ -0.16
TRIM40-205ENST00000307859 PODXL2Q9NZ53 605 aa14.05□□□□□ -0.16
TRIM40-205ENST00000307859 RAI14Q9P0K7 980 aa14.05□□□□□ -0.16
TRIM40-205ENST00000307859 SALL1Q9NSC2 1324 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms