RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 SPDYE2Q495Y8 402 aa32.75■■■□□ 2.83
CDKN2A-201ENST00000304494 IFFO2Q5TF58 517 aa32.75■■■□□ 2.83
CDKN2A-201ENST00000304494 TEKT1Q969V4 418 aa32.75■■■□□ 2.83
CDKN2A-201ENST00000304494 MRIQ9BWK5 157 aa32.75■■■□□ 2.83
CDKN2A-201ENST00000304494 TFCP2Q12800 502 aa32.74■■■□□ 2.83
CDKN2A-201ENST00000304494 MOB2Q70IA6 237 aa32.74■■■□□ 2.83
CDKN2A-201ENST00000304494 ARMC9Q7Z3E5 817 aa32.74■■■□□ 2.83
CDKN2A-201ENST00000304494 UBE2Q2LH0YL09 131 aa32.73■■■□□ 2.83
CDKN2A-201ENST00000304494 ZBTB7BO15156 539 aaPredicted RBP32.73■■■□□ 2.83
CDKN2A-201ENST00000304494 HSPA8P11142 646 aaKnown RBP32.73■■■□□ 2.83
CDKN2A-201ENST00000304494 MS4A1P11836 297 aa32.73■■■□□ 2.83
CDKN2A-201ENST00000304494 LBX1P52954 281 aa32.73■■■□□ 2.83
CDKN2A-201ENST00000304494 G3BP1Q13283 466 aaKnown RBP eCLIP32.73■■■□□ 2.83
CDKN2A-201ENST00000304494 TDRD3Q9H7E2 651 aaKnown RBP32.73■■■□□ 2.83
CDKN2A-201ENST00000304494 ZNF70Q9UC06 446 aaPredicted RBP32.73■■■□□ 2.83
CDKN2A-201ENST00000304494 DENND2AQ9ULE3 1009 aa32.73■■■□□ 2.83
CDKN2A-201ENST00000304494 AOX1Q06278 1338 aa32.73■■■□□ 2.83
CDKN2A-201ENST00000304494 ZBTB22O15209 634 aa32.72■■■□□ 2.83
CDKN2A-201ENST00000304494 SUPT20HL1Q3ZLR7 823 aa32.72■■■□□ 2.83
CDKN2A-201ENST00000304494 MYH13Q9UKX3 1938 aa32.72■■■□□ 2.83
CDKN2A-201ENST00000304494 A0A1B0GUL7 405 aa32.71■■■□□ 2.83
CDKN2A-201ENST00000304494 PHKA1P46020 1223 aa32.71■■■□□ 2.83
CDKN2A-201ENST00000304494 TIMM10P62072 90 aa32.71■■■□□ 2.83
CDKN2A-201ENST00000304494 CCDC102BQ68D86 513 aa32.71■■■□□ 2.83
CDKN2A-201ENST00000304494 RASAL3Q86YV0 1011 aa32.71■■■□□ 2.83
CDKN2A-201ENST00000304494 ADORA1P30542 326 aa32.7■■■□□ 2.83
CDKN2A-201ENST00000304494 ATP8B2P98198 1209 aa32.7■■■□□ 2.83
CDKN2A-201ENST00000304494 KIF23Q02241 960 aaPredicted RBP32.7■■■□□ 2.83
CDKN2A-201ENST00000304494 RASA3Q14644 834 aa32.7■■■□□ 2.83
CDKN2A-201ENST00000304494 TNS4Q8IZW8 715 aa32.7■■■□□ 2.83
CDKN2A-201ENST00000304494 ZDHHC15Q96MV8 337 aa32.7■■■□□ 2.83
CDKN2A-201ENST00000304494 ZIC5Q96T25 663 aa32.7■■■□□ 2.83
CDKN2A-201ENST00000304494 POLA2Q14181 598 aa32.69■■■□□ 2.82
CDKN2A-201ENST00000304494 MVPQ14764 893 aaKnown RBP32.69■■■□□ 2.82
CDKN2A-201ENST00000304494 REM2Q8IYK8 340 aaPredicted RBP32.69■■■□□ 2.82
CDKN2A-201ENST00000304494 PPP1R12BO60237 982 aaPredicted RBP32.68■■■□□ 2.82
CDKN2A-201ENST00000304494 TNNI2P48788 182 aa32.68■■■□□ 2.82
CDKN2A-201ENST00000304494 PRKG1Q13976 671 aa32.68■■■□□ 2.82
CDKN2A-201ENST00000304494 HHIPL2Q6UWX4 724 aa32.68■■■□□ 2.82
CDKN2A-201ENST00000304494 SSH3Q8TE77 659 aa32.68■■■□□ 2.82
CDKN2A-201ENST00000304494 XAGE2Q96GT9 111 aa32.68■■■□□ 2.82
CDKN2A-201ENST00000304494 C1orf115Q9H7X2 142 aa32.68■■■□□ 2.82
CDKN2A-201ENST00000304494 SALL1Q9NSC2 1324 aa32.68■■■□□ 2.82
CDKN2A-201ENST00000304494 PANK1Q8TE04 598 aa32.67■■■□□ 2.82
CDKN2A-201ENST00000304494 ANGEL1Q9UNK9 670 aaKnown RBP32.67■■■□□ 2.82
CDKN2A-201ENST00000304494 ZGPATQ8N5A5 531 aaKnown RBP32.66■■■□□ 2.82
CDKN2A-201ENST00000304494 NEUROD6Q96NK8 337 aa32.66■■■□□ 2.82
CDKN2A-201ENST00000304494 RCAN3Q9UKA8 241 aa32.66■■■□□ 2.82
CDKN2A-201ENST00000304494 LDHBP07195 334 aaKnown RBP32.65■■■□□ 2.82
CDKN2A-201ENST00000304494 TMOD2Q9NZR1 351 aa32.65■■■□□ 2.82
CDKN2A-201ENST00000304494 PDS5AQ29RF7 1337 aaKnown RBP32.65■■■□□ 2.82
CDKN2A-201ENST00000304494 SSC5DA1L4H1 1573 aa32.64■■■□□ 2.82
CDKN2A-201ENST00000304494 TCP10L2B9ZVM9 353 aa32.64■■■□□ 2.82
CDKN2A-201ENST00000304494 MAP3K11Q16584 847 aa32.64■■■□□ 2.82
CDKN2A-201ENST00000304494 LDLRAD1Q5T700 205 aa32.64■■■□□ 2.82
CDKN2A-201ENST00000304494 NBPF12Q5TAG4 269 aaPredicted RBP32.64■■■□□ 2.82
CDKN2A-201ENST00000304494 OS9Q13438 667 aaPredicted RBP32.63■■■□□ 2.81
CDKN2A-201ENST00000304494 GORABQ5T7V8 394 aa32.63■■■□□ 2.81
CDKN2A-201ENST00000304494 UNCXA6NJT0 531 aa32.62■■■□□ 2.81
CDKN2A-201ENST00000304494 PRDX5P30044 214 aa32.62■■■□□ 2.81
CDKN2A-201ENST00000304494 RASGRF1Q13972 1273 aa32.62■■■□□ 2.81
CDKN2A-201ENST00000304494 APOBEC3HQ6NTF7 200 aaKnown RBP32.62■■■□□ 2.81
CDKN2A-201ENST00000304494 CSRNP1Q96S65 589 aa32.62■■■□□ 2.81
CDKN2A-201ENST00000304494 SAGE1Q9NXZ1 904 aa32.62■■■□□ 2.81
CDKN2A-201ENST00000304494 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP32.62■■■□□ 2.81
CDKN2A-201ENST00000304494 SURF6O75683 361 aaKnown RBP32.61■■■□□ 2.81
CDKN2A-201ENST00000304494 TSKSQ9UJT2 592 aa32.61■■■□□ 2.81
CDKN2A-201ENST00000304494 FKBP1CQ5VVH2 108 aa32.6■■■□□ 2.81
CDKN2A-201ENST00000304494 GPR108Q9NPR9 543 aa32.6■■■□□ 2.81
CDKN2A-201ENST00000304494 FZD1Q9UP38 647 aa32.6■■■□□ 2.81
CDKN2A-201ENST00000304494 IREB2P48200 963 aaKnown RBP32.59■■■□□ 2.81
CDKN2A-201ENST00000304494 TEPSINQ96N21 525 aa32.59■■■□□ 2.81
CDKN2A-201ENST00000304494 NOP58Q9Y2X3 529 aaKnown RBP32.59■■■□□ 2.81
CDKN2A-201ENST00000304494 CEP85Q6P2H3 762 aa32.58■■■□□ 2.81
CDKN2A-201ENST00000304494 FAM83AQ86UY5 434 aa32.58■■■□□ 2.81
CDKN2A-201ENST00000304494 TMEM39BQ9GZU3 492 aa32.58■■■□□ 2.81
CDKN2A-201ENST00000304494 DAGLAQ9Y4D2 1042 aa32.58■■■□□ 2.81
CDKN2A-201ENST00000304494 CACNB3P54284 484 aa32.57■■■□□ 2.8
CDKN2A-201ENST00000304494 DIXDC1Q155Q3 683 aa32.57■■■□□ 2.8
CDKN2A-201ENST00000304494 SPTY2D1Q68D10 685 aaPredicted RBP32.57■■■□□ 2.8
CDKN2A-201ENST00000304494 SLC10A4Q96EP9 437 aa32.57■■■□□ 2.8
CDKN2A-201ENST00000304494 DDX19BQ9UMR2 479 aa32.57■■■□□ 2.8
CDKN2A-201ENST00000304494 RNF186Q9NXI6 227 aa32.56■■■□□ 2.8
CDKN2A-201ENST00000304494 ABCF2Q9UG63 623 aa32.56■■■□□ 2.8
CDKN2A-201ENST00000304494 USP2O75604 605 aaPredicted RBP32.55■■■□□ 2.8
CDKN2A-201ENST00000304494 TNNI3KQ59H18 835 aa32.55■■■□□ 2.8
CDKN2A-201ENST00000304494 DZIP1Q86YF9 867 aaKnown RBP32.55■■■□□ 2.8
CDKN2A-201ENST00000304494 SLF2Q8IX21 1173 aa32.55■■■□□ 2.8
CDKN2A-201ENST00000304494 CHMP4BQ9H444 224 aaKnown RBP32.55■■■□□ 2.8
CDKN2A-201ENST00000304494 FPGT-TNNI3KV9GXZ4 949 aa32.55■■■□□ 2.8
CDKN2A-201ENST00000304494 UQCRFS1P1P0C7P4 283 aa32.54■■■□□ 2.8
CDKN2A-201ENST00000304494 ARID4AP29374 1257 aaPredicted RBP32.54■■■□□ 2.8
CDKN2A-201ENST00000304494 SPRYD7Q5W111 196 aa32.54■■■□□ 2.8
CDKN2A-201ENST00000304494 ANKRD13AQ8IZ07 590 aa32.54■■■□□ 2.8
CDKN2A-201ENST00000304494 SPATA5Q8NB90 893 aa32.54■■■□□ 2.8
CDKN2A-201ENST00000304494 HOOK2Q96ED9 719 aa32.54■■■□□ 2.8
CDKN2A-201ENST00000304494 TRPA1O75762 1119 aa32.53■■■□□ 2.8
CDKN2A-201ENST00000304494 SREBF2Q12772 1141 aa32.53■■■□□ 2.8
CDKN2A-201ENST00000304494 MKRN3Q13064 507 aaKnown RBP32.53■■■□□ 2.8
CDKN2A-201ENST00000304494 GOLGA6L2Q8N9W4 650 aaPredicted RBP32.53■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms