RNA–Protein interactions for RNA: ENST00000303545.3

RNF139-201, Transcript of ring finger protein 139, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF139, Length 2,637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139-201ENST00000303545 ORC3Q9UBD5 711 aaPredicted RBP21.85■■□□□ 1.09
RNF139-201ENST00000303545 KIF3AQ9Y496 699 aa21.85■■□□□ 1.09
RNF139-201ENST00000303545 MROH5Q6ZUA9 1318 aa21.85■■□□□ 1.09
RNF139-201ENST00000303545 MYH14Q7Z406 1995 aaKnown RBP21.84■■□□□ 1.09
RNF139-201ENST00000303545 SLC5A1P13866 664 aa21.84■■□□□ 1.09
RNF139-201ENST00000303545 TRDNQ13061 729 aa21.84■■□□□ 1.09
RNF139-201ENST00000303545 AIFM3Q96NN9 605 aa21.84■■□□□ 1.09
RNF139-201ENST00000303545 TCRBV5S4A2TA0A5A2 114 aa21.84■■□□□ 1.09
RNF139-201ENST00000303545 ME1P48163 572 aa21.84■■□□□ 1.09
RNF139-201ENST00000303545 FBXW7Q969H0 707 aa21.84■■□□□ 1.09
RNF139-201ENST00000303545 MYL10Q9BUA6 226 aa21.84■■□□□ 1.09
RNF139-201ENST00000303545 DNAJC25Q9H1X3 360 aa21.84■■□□□ 1.09
RNF139-201ENST00000303545 PLCH1Q4KWH8 1693 aa21.84■■□□□ 1.09
RNF139-201ENST00000303545 PRKAB2O43741 272 aa21.83■■□□□ 1.09
RNF139-201ENST00000303545 MBD4O95243 580 aa21.83■■□□□ 1.09
RNF139-201ENST00000303545 BICDL1Q6ZP65 573 aa21.83■■□□□ 1.09
RNF139-201ENST00000303545 C8orf76Q96K31 380 aa21.83■■□□□ 1.09
RNF139-201ENST00000303545 CBX8Q9HC52 389 aa21.83■■□□□ 1.09
RNF139-201ENST00000303545 NEDD4P46934 1319 aa21.83■■□□□ 1.09
RNF139-201ENST00000303545 ABCC12Q96J65 1359 aa21.83■■□□□ 1.09
RNF139-201ENST00000303545 FAM200AQ8TCP9 573 aa21.83■■□□□ 1.08
RNF139-201ENST00000303545 MYH15Q9Y2K3 1946 aa21.82■■□□□ 1.08
RNF139-201ENST00000303545 UQCRFS1P1P0C7P4 283 aa21.82■■□□□ 1.08
RNF139-201ENST00000303545 UBE3CQ15386 1083 aa21.82■■□□□ 1.08
RNF139-201ENST00000303545 ZNF512BQ96KM6 892 aaPredicted RBP21.82■■□□□ 1.08
RNF139-201ENST00000303545 STRBPQ96SI9 672 aaKnown RBP21.82■■□□□ 1.08
RNF139-201ENST00000303545 WNK3Q9BYP7 1800 aa21.82■■□□□ 1.08
RNF139-201ENST00000303545 SASS6Q6UVJ0 657 aa21.82■■□□□ 1.08
RNF139-201ENST00000303545 RCOR1Q9UKL0 485 aa21.82■■□□□ 1.08
RNF139-201ENST00000303545 EVCP57679 992 aa21.81■■□□□ 1.08
RNF139-201ENST00000303545 MICU3Q86XE3 530 aa21.81■■□□□ 1.08
RNF139-201ENST00000303545 MIGA1Q8NAN2 632 aa21.81■■□□□ 1.08
RNF139-201ENST00000303545 EPB41L4AQ9HCS5 686 aaPredicted RBP21.81■■□□□ 1.08
RNF139-201ENST00000303545 CLIC4Q9Y696 253 aa21.81■■□□□ 1.08
RNF139-201ENST00000303545 COL4A1P02462 1669 aa21.81■■□□□ 1.08
RNF139-201ENST00000303545 NTSR2O95665 410 aa21.8■■□□□ 1.08
RNF139-201ENST00000303545 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.8■■□□□ 1.08
RNF139-201ENST00000303545 C3orf67Q6ZVT6 689 aa21.8■■□□□ 1.08
RNF139-201ENST00000303545 PHKBQ93100 1093 aa21.8■■□□□ 1.08
RNF139-201ENST00000303545 ZNF396Q96N95 335 aaPredicted RBP21.8■■□□□ 1.08
RNF139-201ENST00000303545 TACC3Q9Y6A5 838 aa21.8■■□□□ 1.08
RNF139-201ENST00000303545 KIF28PB7ZC32 967 aa21.8■■□□□ 1.08
RNF139-201ENST00000303545 UBE2Q2LH0YL09 131 aa21.8■■□□□ 1.08
RNF139-201ENST00000303545 IGHMBP2P38935 993 aaKnown RBP21.8■■□□□ 1.08
RNF139-201ENST00000303545 CCDC152Q4G0S7 254 aa21.8■■□□□ 1.08
RNF139-201ENST00000303545 RRP12Q5JTH9 1297 aaKnown RBP21.8■■□□□ 1.08
RNF139-201ENST00000303545 PTF1AQ7RTS3 328 aa21.8■■□□□ 1.08
RNF139-201ENST00000303545 FAM98CQ17RN3 349 aaKnown RBP21.79■■□□□ 1.08
RNF139-201ENST00000303545 TOMM22Q9NS69 142 aa21.79■■□□□ 1.08
RNF139-201ENST00000303545 CHRNDQ07001 517 aa21.79■■□□□ 1.08
RNF139-201ENST00000303545 NFXL1Q6ZNB6 911 aa21.79■■□□□ 1.08
RNF139-201ENST00000303545 FBXL16Q8N461 479 aa21.79■■□□□ 1.08
RNF139-201ENST00000303545 FSIP1Q8NA03 581 aa21.79■■□□□ 1.08
RNF139-201ENST00000303545 ZKSCAN3Q9BRR0 538 aa21.79■■□□□ 1.08
RNF139-201ENST00000303545 ANGEL1Q9UNK9 670 aaKnown RBP21.79■■□□□ 1.08
RNF139-201ENST00000303545 TAF1P21675 1872 aa21.79■■□□□ 1.08
RNF139-201ENST00000303545 CDC27P30260 824 aa21.78■■□□□ 1.08
RNF139-201ENST00000303545 KIAA2012Q0VF49 1180 aa21.78■■□□□ 1.08
RNF139-201ENST00000303545 MAP3K12Q12852 859 aa21.78■■□□□ 1.08
RNF139-201ENST00000303545 IFNL3Q8IZI9 196 aa21.78■■□□□ 1.08
RNF139-201ENST00000303545 NAPBQ9H115 298 aa21.78■■□□□ 1.08
RNF139-201ENST00000303545 PCDHA7Q9UN72 937 aa21.78■■□□□ 1.08
RNF139-201ENST00000303545 A0A1B0GVL5 298 aa21.78■■□□□ 1.08
RNF139-201ENST00000303545 METAP2P50579 478 aaKnown RBP eCLIP21.78■■□□□ 1.08
RNF139-201ENST00000303545 LCORLQ8N3X6 602 aa21.78■■□□□ 1.08
RNF139-201ENST00000303545 CCDC24Q8N4L8 307 aa21.78■■□□□ 1.08
RNF139-201ENST00000303545 AHDC1Q5TGY3 1603 aaPredicted RBP21.78■■□□□ 1.08
RNF139-201ENST00000303545 COL22A1Q8NFW1 1626 aaPredicted RBP21.78■■□□□ 1.08
RNF139-201ENST00000303545 SNW1Q13573 536 aaKnown RBP21.77■■□□□ 1.08
RNF139-201ENST00000303545 ERFEQ4G0M1 354 aa21.77■■□□□ 1.08
RNF139-201ENST00000303545 SPATA31A5Q5VU36 1347 aa21.77■■□□□ 1.08
RNF139-201ENST00000303545 SPATA31A7Q8IWB4 1347 aa21.77■■□□□ 1.08
RNF139-201ENST00000303545 SH2B2O14492 632 aaPredicted RBP21.77■■□□□ 1.08
RNF139-201ENST00000303545 DHX16O60231 1041 aaKnown RBP21.77■■□□□ 1.08
RNF139-201ENST00000303545 CCDC73Q6ZRK6 1079 aa21.77■■□□□ 1.08
RNF139-201ENST00000303545 RBM43Q6ZSC3 357 aaKnown RBP21.77■■□□□ 1.08
RNF139-201ENST00000303545 FBXO18Q8NFZ0 1043 aa21.77■■□□□ 1.08
RNF139-201ENST00000303545 CDCA7Q9BWT1 371 aaPredicted RBP21.77■■□□□ 1.08
RNF139-201ENST00000303545 GYG1P46976 350 aa21.76■■□□□ 1.07
RNF139-201ENST00000303545 ZNF165P49910 485 aa21.76■■□□□ 1.07
RNF139-201ENST00000303545 C11orf57Q6ZUT1 292 aaPredicted RBP21.76■■□□□ 1.07
RNF139-201ENST00000303545 LRP2BPQ9P2M1 347 aa21.76■■□□□ 1.07
RNF139-201ENST00000303545 ABCF2Q9UG63 623 aa21.76■■□□□ 1.07
RNF139-201ENST00000303545 ATRNO75882 1429 aa21.76■■□□□ 1.07
RNF139-201ENST00000303545 DDX60Q8IY21 1712 aaKnown RBP21.76■■□□□ 1.07
RNF139-201ENST00000303545 PATL2C9JE40 543 aaKnown RBP21.76■■□□□ 1.07
RNF139-201ENST00000303545 SMIM22K7EJ46 135 aa21.76■■□□□ 1.07
RNF139-201ENST00000303545 STK38Q15208 465 aa21.76■■□□□ 1.07
RNF139-201ENST00000303545 SF3A1Q15459 793 aaKnown RBP21.76■■□□□ 1.07
RNF139-201ENST00000303545 PARP10Q53GL7 1025 aa21.76■■□□□ 1.07
RNF139-201ENST00000303545 TMEM67Q5HYA8 995 aa21.76■■□□□ 1.07
RNF139-201ENST00000303545 LINC00116Q8NCU8 138 aa21.76■■□□□ 1.07
RNF139-201ENST00000303545 THRAP3Q9Y2W1 955 aaKnown RBP21.76■■□□□ 1.07
RNF139-201ENST00000303545 APOA5Q6Q788 366 aa21.75■■□□□ 1.07
RNF139-201ENST00000303545 ZSWIM5Q9P217 1185 aa21.75■■□□□ 1.07
RNF139-201ENST00000303545 SLC4A4Q9Y6R1 1079 aa21.75■■□□□ 1.07
RNF139-201ENST00000303545 PHLPP1O60346 1717 aa21.75■■□□□ 1.07
RNF139-201ENST00000303545 GSG1L2A8MUP6 293 aa21.75■■□□□ 1.07
RNF139-201ENST00000303545 TDO2P48775 406 aa21.75■■□□□ 1.07
RNF139-201ENST00000303545 DNTTIP2Q5QJE6 756 aaKnown RBP21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms