RNA–Protein interactions for RNA: ENST00000302278.7

ITGB1-201, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGB1, Length 3,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-201ENST00000302278 LINS1Q8NG48 757 aa8.3□□□□□ -1.08
ITGB1-201ENST00000302278 BMP8BP34820 402 aa8.3□□□□□ -1.08
ITGB1-201ENST00000302278 RBM27Q9P2N5 1060 aaKnown RBP8.3□□□□□ -1.08
ITGB1-201ENST00000302278 SUGT1Q9Y2Z0 365 aa8.3□□□□□ -1.08
ITGB1-201ENST00000302278 FOCADQ5VW36 1801 aa8.3□□□□□ -1.08
ITGB1-201ENST00000302278 CCL15-CCL14A0A0B4J2E2 113 aa8.3□□□□□ -1.08
ITGB1-201ENST00000302278 MNX1P50219 401 aaPredicted RBP8.3□□□□□ -1.08
ITGB1-201ENST00000302278 CCL15Q16663 113 aa8.3□□□□□ -1.08
ITGB1-201ENST00000302278 CWF19L2Q2TBE0 894 aaKnown RBP8.3□□□□□ -1.08
ITGB1-201ENST00000302278 ZNF428Q96B54 188 aa8.3□□□□□ -1.08
ITGB1-201ENST00000302278 MYH16Q9H6N6 1097 aa8.3□□□□□ -1.08
ITGB1-201ENST00000302278 ANKRD18BA2A2Z9 1011 aa8.29□□□□□ -1.08
ITGB1-201ENST00000302278 ZBTB7BO15156 539 aaPredicted RBP8.29□□□□□ -1.08
ITGB1-201ENST00000302278 GJB1P08034 283 aa8.29□□□□□ -1.08
ITGB1-201ENST00000302278 CTGFP29279 349 aa8.29□□□□□ -1.08
ITGB1-201ENST00000302278 UBE4AQ14139 1066 aa8.29□□□□□ -1.08
ITGB1-201ENST00000302278 TAF1CQ15572 869 aaPredicted RBP8.29□□□□□ -1.08
ITGB1-201ENST00000302278 UBE3BQ7Z3V4 1068 aa8.29□□□□□ -1.08
ITGB1-201ENST00000302278 ERO1BQ86YB8 467 aa8.29□□□□□ -1.08
ITGB1-201ENST00000302278 CCDC85AQ96PX6 553 aaPredicted RBP8.29□□□□□ -1.08
ITGB1-201ENST00000302278 ELP3Q9H9T3 547 aa8.29□□□□□ -1.08
ITGB1-201ENST00000302278 SLC45A1Q9Y2W3 748 aa8.29□□□□□ -1.08
ITGB1-201ENST00000302278 LAS1LQ9Y4W2 734 aaKnown RBP8.29□□□□□ -1.08
ITGB1-201ENST00000302278 UTYO14607 1347 aa8.29□□□□□ -1.08
ITGB1-201ENST00000302278 RFX7Q2KHR2 1363 aa8.29□□□□□ -1.08
ITGB1-201ENST00000302278 PPATQ06203 517 aa8.29□□□□□ -1.08
ITGB1-201ENST00000302278 PRKG1Q13976 671 aa8.29□□□□□ -1.08
ITGB1-201ENST00000302278 JARID2Q92833 1246 aaPredicted RBP8.29□□□□□ -1.08
ITGB1-201ENST00000302278 HOOK2Q96ED9 719 aa8.29□□□□□ -1.08
ITGB1-201ENST00000302278 MPHOSPH8Q99549 860 aa8.29□□□□□ -1.08
ITGB1-201ENST00000302278 SRRDQ9UH36 339 aa8.29□□□□□ -1.08
ITGB1-201ENST00000302278 ATRNL1Q5VV63 1379 aa8.29□□□□□ -1.08
ITGB1-201ENST00000302278 TSPYL6Q8N831 410 aa8.29□□□□□ -1.08
ITGB1-201ENST00000302278 LTBP2Q14767 1821 aa8.29□□□□□ -1.08
ITGB1-201ENST00000302278 BTBD19C9JJ37 291 aa8.28□□□□□ -1.08
ITGB1-201ENST00000302278 TNNI2P48788 182 aa8.28□□□□□ -1.08
ITGB1-201ENST00000302278 WDR43Q15061 677 aaKnown RBP eCLIP8.28□□□□□ -1.08
ITGB1-201ENST00000302278 DZIP1LQ8IYY4 767 aaKnown RBP8.28□□□□□ -1.08
ITGB1-201ENST00000302278 ZDHHC15Q96MV8 337 aa8.28□□□□□ -1.08
ITGB1-201ENST00000302278 SNAPC2Q13487 334 aa8.28□□□□□ -1.08
ITGB1-201ENST00000302278 HTATIP2Q9BUP3 242 aa8.28□□□□□ -1.08
ITGB1-201ENST00000302278 CRISPLD2Q9H0B8 497 aa8.28□□□□□ -1.08
ITGB1-201ENST00000302278 CENPFP49454 3210 aa8.28□□□□□ -1.08
ITGB1-201ENST00000302278 CLRN2A0PK11 232 aa8.28□□□□□ -1.08
ITGB1-201ENST00000302278 BCRP11274 1271 aa8.28□□□□□ -1.08
ITGB1-201ENST00000302278 FBXO33Q7Z6M2 555 aa8.28□□□□□ -1.08
ITGB1-201ENST00000302278 ARHGAP39Q9C0H5 1083 aa8.28□□□□□ -1.08
ITGB1-201ENST00000302278 IRF5Q13568 498 aa8.27□□□□□ -1.09
ITGB1-201ENST00000302278 KIF22Q14807 665 aa8.27□□□□□ -1.09
ITGB1-201ENST00000302278 CRKP46108 304 aa8.27□□□□□ -1.09
ITGB1-201ENST00000302278 BEND3Q5T5X7 828 aa8.27□□□□□ -1.09
ITGB1-201ENST00000302278 CHRDL2Q6WN34 429 aa8.27□□□□□ -1.09
ITGB1-201ENST00000302278 G2E3Q7L622 706 aa8.27□□□□□ -1.09
ITGB1-201ENST00000302278 PXYLP1Q8TE99 480 aa8.27□□□□□ -1.09
ITGB1-201ENST00000302278 DNAAF4Q8WXU2 420 aa8.27□□□□□ -1.09
ITGB1-201ENST00000302278 FBXW7Q969H0 707 aa8.27□□□□□ -1.09
ITGB1-201ENST00000302278 TRIM47Q96LD4 638 aa8.27□□□□□ -1.09
ITGB1-201ENST00000302278 MAP3K10Q02779 954 aa8.27□□□□□ -1.09
ITGB1-201ENST00000302278 FLIIQ13045 1269 aa8.27□□□□□ -1.09
ITGB1-201ENST00000302278 NEUROD2Q15784 382 aa8.27□□□□□ -1.09
ITGB1-201ENST00000302278 CDAN1Q8IWY9 1227 aa8.27□□□□□ -1.09
ITGB1-201ENST00000302278 VGLL2Q8N8G2 317 aa8.27□□□□□ -1.09
ITGB1-201ENST00000302278 SLAIN1Q8ND83 568 aa8.27□□□□□ -1.09
ITGB1-201ENST00000302278 TBC1D22AQ8WUA7 517 aa8.27□□□□□ -1.09
ITGB1-201ENST00000302278 CNKSR2Q8WXI2 1034 aa8.27□□□□□ -1.09
ITGB1-201ENST00000302278 CSADQ9Y600 493 aa8.27□□□□□ -1.09
ITGB1-201ENST00000302278 HOXD10P28358 340 aa8.26□□□□□ -1.09
ITGB1-201ENST00000302278 KCNJ4P48050 445 aa8.26□□□□□ -1.09
ITGB1-201ENST00000302278 SLC4A8Q2Y0W8 1093 aa8.26□□□□□ -1.09
ITGB1-201ENST00000302278 HHIPL2Q6UWX4 724 aa8.26□□□□□ -1.09
ITGB1-201ENST00000302278 SH3TC2Q8TF17 1288 aa8.26□□□□□ -1.09
ITGB1-201ENST00000302278 FAM84BQ96KN1 310 aaPredicted RBP8.26□□□□□ -1.09
ITGB1-201ENST00000302278 STK31Q9BXU1 1019 aa8.26□□□□□ -1.09
ITGB1-201ENST00000302278 PAK6Q9NQU5 681 aaPredicted RBP8.26□□□□□ -1.09
ITGB1-201ENST00000302278 SIPA1L1O43166 1804 aa8.26□□□□□ -1.09
ITGB1-201ENST00000302278 AK9Q5TCS8 1911 aa8.26□□□□□ -1.09
ITGB1-201ENST00000302278 CDK5RAP2Q96SN8 1893 aa8.26□□□□□ -1.09
ITGB1-201ENST00000302278 WDHD1O75717 1129 aaPredicted RBP8.26□□□□□ -1.09
ITGB1-201ENST00000302278 OSBPP22059 807 aa8.26□□□□□ -1.09
ITGB1-201ENST00000302278 IFIT5Q13325 482 aaKnown RBP8.26□□□□□ -1.09
ITGB1-201ENST00000302278 VEZTQ9HBM0 779 aa8.26□□□□□ -1.09
ITGB1-201ENST00000302278 MROH5Q6ZUA9 1318 aa8.26□□□□□ -1.09
ITGB1-201ENST00000302278 MYH2Q9UKX2 1941 aa8.26□□□□□ -1.09
ITGB1-201ENST00000302278 RABL6Q3YEC7 729 aaPredicted RBP8.25□□□□□ -1.09
ITGB1-201ENST00000302278 GPAT2Q6NUI2 795 aa8.25□□□□□ -1.09
ITGB1-201ENST00000302278 ANKLE1Q8NAG6 615 aa8.25□□□□□ -1.09
ITGB1-201ENST00000302278 TMEM39BQ9GZU3 492 aa8.25□□□□□ -1.09
ITGB1-201ENST00000302278 TDRD3Q9H7E2 651 aaKnown RBP8.25□□□□□ -1.09
ITGB1-201ENST00000302278 MAST3O60307 1309 aa8.25□□□□□ -1.09
ITGB1-201ENST00000302278 TAF5LO75529 589 aa8.25□□□□□ -1.09
ITGB1-201ENST00000302278 CCL5P13501 91 aa8.25□□□□□ -1.09
ITGB1-201ENST00000302278 GRK4P32298 578 aa8.25□□□□□ -1.09
ITGB1-201ENST00000302278 MFSD14BQ5SR56 506 aa8.25□□□□□ -1.09
ITGB1-201ENST00000302278 TTF2Q9UNY4 1162 aaKnown RBP8.25□□□□□ -1.09
ITGB1-201ENST00000302278 RIPOR2Q9Y4F9 1068 aa8.25□□□□□ -1.09
ITGB1-201ENST00000302278 APAF1O14727 1248 aa8.25□□□□□ -1.09
ITGB1-201ENST00000302278 IRF6O14896 467 aa8.25□□□□□ -1.09
ITGB1-201ENST00000302278 TWISTNBQ3B726 338 aaPredicted RBP8.25□□□□□ -1.09
ITGB1-201ENST00000302278 APOBEC3HQ6NTF7 200 aaKnown RBP8.25□□□□□ -1.09
ITGB1-201ENST00000302278 ZNF236Q9UL36 1845 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms