RNA–Protein interactions for RNA: ENST00000299413.6

TRIM44-201, Transcript of tripartite motif containing 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM44, Length 12,964 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM44-201ENST00000299413 CNPY2Q9Y2B0 182 aa11.21□□□□□ -0.62
TRIM44-201ENST00000299413 PLVAPQ9BX97 442 aa11.21□□□□□ -0.62
TRIM44-201ENST00000299413 GBP3Q9H0R5 595 aa11.21□□□□□ -0.62
TRIM44-201ENST00000299413 FNDC3AQ9Y2H6 1198 aaKnown RBP11.21□□□□□ -0.62
TRIM44-201ENST00000299413 FRMD4BQ9Y2L6 1034 aa11.21□□□□□ -0.62
TRIM44-201ENST00000299413 NEK11Q8NG66 645 aa11.2□□□□□ -0.62
TRIM44-201ENST00000299413 IFT81Q8WYA0 676 aa11.2□□□□□ -0.62
TRIM44-201ENST00000299413 TEX11Q8IYF3 940 aa11.2□□□□□ -0.62
TRIM44-201ENST00000299413 IFT74Q96LB3 600 aa11.2□□□□□ -0.62
TRIM44-201ENST00000299413 SEPT10Q9P0V9 454 aa11.2□□□□□ -0.62
TRIM44-201ENST00000299413 ACEP12821 1306 aa11.2□□□□□ -0.62
TRIM44-201ENST00000299413 SNW1Q13573 536 aaKnown RBP11.2□□□□□ -0.62
TRIM44-201ENST00000299413 ITKQ08881 620 aa11.2□□□□□ -0.62
TRIM44-201ENST00000299413 NCAPH2Q6IBW4 605 aa11.2□□□□□ -0.62
TRIM44-201ENST00000299413 SYNJ2BP-COX16A0A087WUM0 186 aa11.2□□□□□ -0.62
TRIM44-201ENST00000299413 CCT6AP40227 531 aaKnown RBP11.2□□□□□ -0.62
TRIM44-201ENST00000299413 NBPF3Q9H094 633 aa11.2□□□□□ -0.62
TRIM44-201ENST00000299413 COX16Q9P0S2 106 aa11.2□□□□□ -0.62
TRIM44-201ENST00000299413 PAG1Q9NWQ8 432 aa11.2□□□□□ -0.62
TRIM44-201ENST00000299413 MICALCLQ6ZW33 695 aa11.2□□□□□ -0.62
TRIM44-201ENST00000299413 DAAM2Q86T65 1068 aa11.2□□□□□ -0.62
TRIM44-201ENST00000299413 ARHGEF10LQ9HCE6 1279 aa11.2□□□□□ -0.62
TRIM44-201ENST00000299413 AATFQ9NY61 560 aaKnown RBP eCLIP11.2□□□□□ -0.62
TRIM44-201ENST00000299413 USP21Q9UK80 565 aa11.2□□□□□ -0.62
TRIM44-201ENST00000299413 IGF1RP08069 1367 aa11.19□□□□□ -0.62
TRIM44-201ENST00000299413 CTAGE5O15320 804 aa11.19□□□□□ -0.62
TRIM44-201ENST00000299413 UQCRFS1P1P0C7P4 283 aa11.19□□□□□ -0.62
TRIM44-201ENST00000299413 KARSQ15046 597 aaKnown RBP11.19□□□□□ -0.62
TRIM44-201ENST00000299413 ZNF174Q15697 407 aa11.19□□□□□ -0.62
TRIM44-201ENST00000299413 LETM2Q2VYF4 491 aa11.19□□□□□ -0.62
TRIM44-201ENST00000299413 PPME1Q9Y570 386 aa11.19□□□□□ -0.62
TRIM44-201ENST00000299413 ADCY5O95622 1261 aa11.19□□□□□ -0.62
TRIM44-201ENST00000299413 RYBPQ8N488 228 aaPredicted RBP11.19□□□□□ -0.62
TRIM44-201ENST00000299413 FAM204AQ9H8W3 233 aa11.19□□□□□ -0.62
TRIM44-201ENST00000299413 NOS1P29475 1434 aa11.19□□□□□ -0.62
TRIM44-201ENST00000299413 NBPF7P0C2Y1 421 aaPredicted RBP11.19□□□□□ -0.62
TRIM44-201ENST00000299413 FOXD4Q12950 439 aaPredicted RBP11.19□□□□□ -0.62
TRIM44-201ENST00000299413 RSPH3Q86UC2 560 aa11.19□□□□□ -0.62
TRIM44-201ENST00000299413 SPC25Q9HBM1 224 aa11.19□□□□□ -0.62
TRIM44-201ENST00000299413 RTL9Q8NET4 1388 aa11.19□□□□□ -0.62
TRIM44-201ENST00000299413 LMBR1LQ6UX01 489 aa11.19□□□□□ -0.62
TRIM44-201ENST00000299413 ABCC5O15440 1437 aa11.19□□□□□ -0.62
TRIM44-201ENST00000299413 DPP8Q6V1X1 898 aaPredicted RBP11.19□□□□□ -0.62
TRIM44-201ENST00000299413 SMC6Q96SB8 1091 aa11.19□□□□□ -0.62
TRIM44-201ENST00000299413 MCM4P33991 863 aa11.18□□□□□ -0.62
TRIM44-201ENST00000299413 PPP1R9BQ96SB3 815 aa11.18□□□□□ -0.62
TRIM44-201ENST00000299413 APOL6Q9BWW8 343 aa11.18□□□□□ -0.62
TRIM44-201ENST00000299413 PLCG2P16885 1265 aa11.18□□□□□ -0.62
TRIM44-201ENST00000299413 KRT79Q5XKE5 535 aa11.18□□□□□ -0.62
TRIM44-201ENST00000299413 ZRANB1Q9UGI0 708 aa11.18□□□□□ -0.62
TRIM44-201ENST00000299413 PPIP5K2O43314 1243 aa11.18□□□□□ -0.62
TRIM44-201ENST00000299413 OATP04181 439 aa11.18□□□□□ -0.62
TRIM44-201ENST00000299413 MCM6Q14566 821 aa11.18□□□□□ -0.62
TRIM44-201ENST00000299413 SEC62Q99442 399 aaKnown RBP11.18□□□□□ -0.62
TRIM44-201ENST00000299413 CCDC141Q6ZP82 1450 aa11.18□□□□□ -0.62
TRIM44-201ENST00000299413 MAN1A1P33908 653 aa11.18□□□□□ -0.62
TRIM44-201ENST00000299413 MAPK8IP1Q9UQF2 711 aa11.18□□□□□ -0.62
TRIM44-201ENST00000299413 VWA3AA6NCI4 1184 aa11.18□□□□□ -0.62
TRIM44-201ENST00000299413 AZI2Q9H6S1 392 aa11.18□□□□□ -0.62
TRIM44-201ENST00000299413 XRCC6P12956 609 aaKnown RBP eCLIP11.18□□□□□ -0.62
TRIM44-201ENST00000299413 RPAP2Q8IXW5 612 aaPredicted RBP11.18□□□□□ -0.62
TRIM44-201ENST00000299413 GANCQ8TET4 914 aa11.18□□□□□ -0.62
TRIM44-201ENST00000299413 HS2ST1Q7LGA3 356 aa11.18□□□□□ -0.62
TRIM44-201ENST00000299413 ABCF3Q9NUQ8 709 aa11.18□□□□□ -0.62
TRIM44-201ENST00000299413 EPB41P11171 864 aaKnown RBP11.18□□□□□ -0.62
TRIM44-201ENST00000299413 TBC1D9Q6ZT07 1266 aa11.18□□□□□ -0.62
TRIM44-201ENST00000299413 DCLK2Q8N568 766 aa11.18□□□□□ -0.62
TRIM44-201ENST00000299413 hCG_1642624A0A1W2PR95 340 aa11.18□□□□□ -0.62
TRIM44-201ENST00000299413 FAM193BQ96PV7 902 aaPredicted RBP11.18□□□□□ -0.62
TRIM44-201ENST00000299413 IGBP1P78318 339 aa11.18□□□□□ -0.62
TRIM44-201ENST00000299413 CCDC184Q52MB2 194 aa11.17□□□□□ -0.62
TRIM44-201ENST00000299413 CHMP6Q96FZ7 201 aa11.17□□□□□ -0.62
TRIM44-201ENST00000299413 GOLGA6L9A6NEM1 432 aa11.17□□□□□ -0.62
TRIM44-201ENST00000299413 TLDC2A0PJX2 215 aa11.17□□□□□ -0.62
TRIM44-201ENST00000299413 RIOK1Q9BRS2 568 aaKnown RBP11.17□□□□□ -0.62
TRIM44-201ENST00000299413 CNNM2Q9H8M5 875 aa11.17□□□□□ -0.62
TRIM44-201ENST00000299413 PALM3A6NDB9 673 aaPredicted RBP11.17□□□□□ -0.62
TRIM44-201ENST00000299413 APOBRQ0VD83 1088 aa11.17□□□□□ -0.62
TRIM44-201ENST00000299413 GLG1Q92896 1179 aa11.17□□□□□ -0.62
TRIM44-201ENST00000299413 SPDYE2BA6NHP3 402 aa11.17□□□□□ -0.62
TRIM44-201ENST00000299413 SPDYE6P0CI01 402 aa11.17□□□□□ -0.62
TRIM44-201ENST00000299413 UBLCP1Q8WVY7 318 aaPredicted RBP11.17□□□□□ -0.62
TRIM44-201ENST00000299413 ATRIPQ8WXE1 791 aa11.17□□□□□ -0.62
TRIM44-201ENST00000299413 HFM1A2PYH4 1435 aa11.17□□□□□ -0.62
TRIM44-201ENST00000299413 NPHP3Q7Z494 1330 aa11.17□□□□□ -0.62
TRIM44-201ENST00000299413 TFCP2Q12800 502 aa11.17□□□□□ -0.62
TRIM44-201ENST00000299413 LEO1Q8WVC0 666 aaPredicted RBP11.17□□□□□ -0.62
TRIM44-201ENST00000299413 CALML3P27482 149 aa11.17□□□□□ -0.62
TRIM44-201ENST00000299413 CWF19L2Q2TBE0 894 aaKnown RBP11.17□□□□□ -0.62
TRIM44-201ENST00000299413 SUDS3Q9H7L9 328 aaPredicted RBP11.17□□□□□ -0.62
TRIM44-201ENST00000299413 GGA1Q9UJY5 639 aa11.17□□□□□ -0.62
TRIM44-201ENST00000299413 PSMA7O14818 248 aa11.17□□□□□ -0.62
TRIM44-201ENST00000299413 TRIM7Q9C029 511 aa11.17□□□□□ -0.62
TRIM44-201ENST00000299413 BZW2Q9Y6E2 419 aaKnown RBP11.17□□□□□ -0.62
TRIM44-201ENST00000299413 SMTNP53814 917 aa11.17□□□□□ -0.62
TRIM44-201ENST00000299413 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.17□□□□□ -0.62
TRIM44-201ENST00000299413 V9GYY5 206 aaPredicted RBP11.17□□□□□ -0.62
TRIM44-201ENST00000299413 NOL3O60936 208 aaKnown RBP11.16□□□□□ -0.62
TRIM44-201ENST00000299413 LONRF3Q496Y0 759 aa11.16□□□□□ -0.62
TRIM44-201ENST00000299413 SCNN1DP51172 638 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 178.1 ms