RNA–Protein interactions for RNA: ENST00000298532.2

SNAPC4-201, Transcript of small nuclear RNA activating complex polypeptide 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC4, Length 5,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4-201ENST00000298532 UBXN1Q04323 297 aa18.64■□□□□ 0.58
SNAPC4-201ENST00000298532 CEP63Q96MT8 703 aa18.64■□□□□ 0.58
SNAPC4-201ENST00000298532 A0A1B0GVL5 298 aa18.64■□□□□ 0.57
SNAPC4-201ENST00000298532 LDHCP07864 332 aa18.64■□□□□ 0.57
SNAPC4-201ENST00000298532 STX17P56962 302 aa18.64■□□□□ 0.57
SNAPC4-201ENST00000298532 CHMP4BP1P59074 171 aa18.64■□□□□ 0.57
SNAPC4-201ENST00000298532 ADGBQ8N7X0 1667 aa18.64■□□□□ 0.57
SNAPC4-201ENST00000298532 FBLN1P23142 703 aa18.64■□□□□ 0.57
SNAPC4-201ENST00000298532 KSR2Q6VAB6 950 aa18.64■□□□□ 0.57
SNAPC4-201ENST00000298532 LMBR1Q8WVP7 490 aa18.64■□□□□ 0.57
SNAPC4-201ENST00000298532 CCDC77Q9BR77 488 aa18.64■□□□□ 0.57
SNAPC4-201ENST00000298532 MMRN2Q9H8L6 949 aa18.64■□□□□ 0.57
SNAPC4-201ENST00000298532 CCDC152Q4G0S7 254 aa18.63■□□□□ 0.57
SNAPC4-201ENST00000298532 UGGT1Q9NYU2 1555 aa18.63■□□□□ 0.57
SNAPC4-201ENST00000298532 A6NNZ2 444 aa18.63■□□□□ 0.57
SNAPC4-201ENST00000298532 HOXC9P31274 260 aa18.63■□□□□ 0.57
SNAPC4-201ENST00000298532 TUBB8Q3ZCM7 444 aa18.63■□□□□ 0.57
SNAPC4-201ENST00000298532 COL17A1Q9UMD9 1497 aaPredicted RBP18.63■□□□□ 0.57
SNAPC4-201ENST00000298532 GADD45BO75293 160 aaPredicted RBP18.63■□□□□ 0.57
SNAPC4-201ENST00000298532 ESR2Q92731 530 aa18.63■□□□□ 0.57
SNAPC4-201ENST00000298532 SCLT1Q96NL6 688 aa18.63■□□□□ 0.57
SNAPC4-201ENST00000298532 ORAI2Q96SN7 254 aa18.63■□□□□ 0.57
SNAPC4-201ENST00000298532 POLKQ9UBT6 870 aa18.63■□□□□ 0.57
SNAPC4-201ENST00000298532 LTKP29376 864 aa18.63■□□□□ 0.57
SNAPC4-201ENST00000298532 PPM1EQ8WY54 764 aa18.63■□□□□ 0.57
SNAPC4-201ENST00000298532 ACSBG1Q96GR2 724 aa18.63■□□□□ 0.57
SNAPC4-201ENST00000298532 NAPGQ99747 312 aaPredicted RBP18.63■□□□□ 0.57
SNAPC4-201ENST00000298532 RSRC1Q96IZ7 334 aaKnown RBP18.62■□□□□ 0.57
SNAPC4-201ENST00000298532 USP21Q9UK80 565 aa18.62■□□□□ 0.57
SNAPC4-201ENST00000298532 SBNO1A3KN83 1393 aa18.62■□□□□ 0.57
SNAPC4-201ENST00000298532 BRD1O95696 1058 aa18.62■□□□□ 0.57
SNAPC4-201ENST00000298532 CPA1P15085 419 aa18.62■□□□□ 0.57
SNAPC4-201ENST00000298532 TTF2Q9UNY4 1162 aaKnown RBP18.62■□□□□ 0.57
SNAPC4-201ENST00000298532 ASIC1P78348 528 aa18.62■□□□□ 0.57
SNAPC4-201ENST00000298532 CCDC122Q5T0U0 273 aa18.62■□□□□ 0.57
SNAPC4-201ENST00000298532 POTEDQ86YR6 584 aa18.62■□□□□ 0.57
SNAPC4-201ENST00000298532 CUL5Q93034 780 aa18.62■□□□□ 0.57
SNAPC4-201ENST00000298532 PAG1Q9NWQ8 432 aa18.62■□□□□ 0.57
SNAPC4-201ENST00000298532 IL15P40933 162 aaPredicted RBP18.62■□□□□ 0.57
SNAPC4-201ENST00000298532 KRI1Q8N9T8 703 aaKnown RBP18.62■□□□□ 0.57
SNAPC4-201ENST00000298532 HOMER2Q9NSB8 354 aa18.62■□□□□ 0.57
SNAPC4-201ENST00000298532 PA2G4Q9UQ80 394 aaKnown RBP18.62■□□□□ 0.57
SNAPC4-201ENST00000298532 BICDL2A1A5D9 508 aa18.61■□□□□ 0.57
SNAPC4-201ENST00000298532 TNNC1P63316 161 aa18.61■□□□□ 0.57
SNAPC4-201ENST00000298532 IFT81Q8WYA0 676 aa18.61■□□□□ 0.57
SNAPC4-201ENST00000298532 TFCP2L1Q9NZI6 479 aa18.61■□□□□ 0.57
SNAPC4-201ENST00000298532 OTUD7AQ8TE49 926 aaPredicted RBP18.61■□□□□ 0.57
SNAPC4-201ENST00000298532 TBC1D5Q92609 795 aa18.61■□□□□ 0.57
SNAPC4-201ENST00000298532 PARP3Q9Y6F1 533 aa18.61■□□□□ 0.57
SNAPC4-201ENST00000298532 C6orf229H3BNL8 230 aa18.61■□□□□ 0.57
SNAPC4-201ENST00000298532 NEBLO76041 1014 aa18.61■□□□□ 0.57
SNAPC4-201ENST00000298532 FANCCQ00597 558 aa18.61■□□□□ 0.57
SNAPC4-201ENST00000298532 SPATA24Q86W54 205 aa18.61■□□□□ 0.57
SNAPC4-201ENST00000298532 A0A1B0GUA9 196 aa18.61■□□□□ 0.57
SNAPC4-201ENST00000298532 RPS6KB1P23443 525 aa18.61■□□□□ 0.57
SNAPC4-201ENST00000298532 LINS1Q8NG48 757 aa18.61■□□□□ 0.57
SNAPC4-201ENST00000298532 ZNF622Q969S3 477 aaKnown RBP eCLIP18.61■□□□□ 0.572e-6■■□□□ 12.9
SNAPC4-201ENST00000298532 ZBTB9Q96C00 473 aa18.61■□□□□ 0.57
SNAPC4-201ENST00000298532 NLRP3Q96P20 1036 aa18.6■□□□□ 0.57
SNAPC4-201ENST00000298532 SELENOSQ9BQE4 189 aa18.6■□□□□ 0.57
SNAPC4-201ENST00000298532 CARD14Q9BXL6 1004 aa18.6■□□□□ 0.57
SNAPC4-201ENST00000298532 TSGA10Q9BZW7 698 aa18.6■□□□□ 0.57
SNAPC4-201ENST00000298532 SNX14Q9Y5W7 946 aa18.6■□□□□ 0.57
SNAPC4-201ENST00000298532 TMEM94Q12767 1356 aa18.6■□□□□ 0.57
SNAPC4-201ENST00000298532 NPC1L1Q9UHC9 1359 aa18.6■□□□□ 0.57
SNAPC4-201ENST00000298532 ARHGAP6O43182 974 aa18.6■□□□□ 0.57
SNAPC4-201ENST00000298532 CRACR2BQ8N4Y2 399 aaPredicted RBP18.6■□□□□ 0.57
SNAPC4-201ENST00000298532 IKBKGQ9Y6K9 419 aa18.6■□□□□ 0.57
SNAPC4-201ENST00000298532 AOX1Q06278 1338 aa18.6■□□□□ 0.57
SNAPC4-201ENST00000298532 NDUFAB1O14561 156 aa18.6■□□□□ 0.57
SNAPC4-201ENST00000298532 PLCD3Q8N3E9 789 aa18.6■□□□□ 0.57
SNAPC4-201ENST00000298532 LEO1Q8WVC0 666 aaPredicted RBP18.6■□□□□ 0.57
SNAPC4-201ENST00000298532 BABAM1Q9NWV8 329 aa18.6■□□□□ 0.57
SNAPC4-201ENST00000298532 A0A1W2PP64 1363 aa18.6■□□□□ 0.57
SNAPC4-201ENST00000298532 TSPOAP1O95153 1857 aa18.6■□□□□ 0.57
SNAPC4-201ENST00000298532 IFIT1BQ5T764 474 aaKnown RBP18.6■□□□□ 0.57
SNAPC4-201ENST00000298532 JARID2Q92833 1246 aaPredicted RBP18.6■□□□□ 0.57
SNAPC4-201ENST00000298532 LLPHQ9BRT6 129 aaKnown RBP18.6■□□□□ 0.57
SNAPC4-201ENST00000298532 SAMD15Q9P1V8 674 aa18.6■□□□□ 0.57
SNAPC4-201ENST00000298532 PREX2Q70Z35 1606 aa18.59■□□□□ 0.57
SNAPC4-201ENST00000298532 INPP5BP32019 993 aa18.59■□□□□ 0.57
SNAPC4-201ENST00000298532 BAG6P46379 1132 aa18.59■□□□□ 0.57
SNAPC4-201ENST00000298532 TPTE2Q6XPS3 522 aa18.59■□□□□ 0.57
SNAPC4-201ENST00000298532 IGSF22Q8N9C0 903 aa18.59■□□□□ 0.57
SNAPC4-201ENST00000298532 GPTP24298 496 aa18.59■□□□□ 0.57
SNAPC4-201ENST00000298532 OAS2P29728 719 aaKnown RBP18.59■□□□□ 0.57
SNAPC4-201ENST00000298532 TRIM14Q14142 442 aa18.59■□□□□ 0.57
SNAPC4-201ENST00000298532 IQUBQ8NA54 791 aa18.59■□□□□ 0.57
SNAPC4-201ENST00000298532 RNF113AO15541 343 aaKnown RBP18.59■□□□□ 0.57
SNAPC4-201ENST00000298532 MAP3K5Q99683 1374 aa18.58■□□□□ 0.57
SNAPC4-201ENST00000298532 BLMP54132 1417 aaPredicted RBP18.58■□□□□ 0.57
SNAPC4-201ENST00000298532 TBCAO75347 108 aaKnown RBP18.58■□□□□ 0.57
SNAPC4-201ENST00000298532 MKRN1Q9UHC7 482 aaKnown RBP18.58■□□□□ 0.57
SNAPC4-201ENST00000298532 GNAQP50148 359 aa18.58■□□□□ 0.56
SNAPC4-201ENST00000298532 ATP2B3Q16720 1220 aa18.58■□□□□ 0.56
SNAPC4-201ENST00000298532 ZNF772Q68DY9 489 aaPredicted RBP18.58■□□□□ 0.56
SNAPC4-201ENST00000298532 LMBR1LQ6UX01 489 aa18.58■□□□□ 0.56
SNAPC4-201ENST00000298532 CHST3Q7LGC8 479 aa18.58■□□□□ 0.56
SNAPC4-201ENST00000298532 NEK11Q8NG66 645 aa18.58■□□□□ 0.56
SNAPC4-201ENST00000298532 TSC1Q92574 1164 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 148 ms