RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 NPHP1O15259 732 aa7.4□□□□□ -1.22
SSX3-201ENST00000298396 GNAI3P08754 354 aa7.4□□□□□ -1.22
SSX3-201ENST00000298396 NPR1P16066 1061 aa7.4□□□□□ -1.22
SSX3-201ENST00000298396 FUT2Q10981 343 aa7.4□□□□□ -1.22
SSX3-201ENST00000298396 MTX1Q13505 466 aa7.4□□□□□ -1.22
SSX3-201ENST00000298396 SIRT2Q8IXJ6 389 aa7.4□□□□□ -1.22
SSX3-201ENST00000298396 EXOC6Q8TAG9 804 aa7.4□□□□□ -1.22
SSX3-201ENST00000298396 KLHDC4Q8TBB5 520 aa7.4□□□□□ -1.22
SSX3-201ENST00000298396 RNF166Q96A37 237 aaPredicted RBP7.4□□□□□ -1.22
SSX3-201ENST00000298396 ZNF594Q96JF6 807 aaPredicted RBP7.4□□□□□ -1.22
SSX3-201ENST00000298396 CRAMP1Q96RY5 1269 aa7.4□□□□□ -1.22
SSX3-201ENST00000298396 AKAP11Q9UKA4 1901 aa7.4□□□□□ -1.23
SSX3-201ENST00000298396 MOXD2PA6NHM9 499 aa7.39□□□□□ -1.23
SSX3-201ENST00000298396 WTIPA6NIX2 430 aaPredicted RBP7.39□□□□□ -1.23
SSX3-201ENST00000298396 ITGA6P23229 1130 aa7.39□□□□□ -1.23
SSX3-201ENST00000298396 CLK2P49760 499 aaKnown RBP7.39□□□□□ -1.23
SSX3-201ENST00000298396 PRELPP51888 382 aa7.39□□□□□ -1.23
SSX3-201ENST00000298396 GRAPQ13588 217 aa7.39□□□□□ -1.23
SSX3-201ENST00000298396 CCDC152Q4G0S7 254 aa7.39□□□□□ -1.23
SSX3-201ENST00000298396 MORN1Q5T089 497 aa7.39□□□□□ -1.23
SSX3-201ENST00000298396 PRPF40BQ6NWY9 871 aaKnown RBP7.39□□□□□ -1.23
SSX3-201ENST00000298396 CEP85Q6P2H3 762 aa7.39□□□□□ -1.23
SSX3-201ENST00000298396 GRAPLQ8TC17 118 aaPredicted RBP7.39□□□□□ -1.23
SSX3-201ENST00000298396 ZNF622Q969S3 477 aaKnown RBP eCLIP7.39□□□□□ -1.232e-6■■□□□ 13.4
SSX3-201ENST00000298396 RBM17Q96I25 401 aaKnown RBP7.39□□□□□ -1.23
SSX3-201ENST00000298396 PUS3Q9BZE2 481 aaKnown RBP7.39□□□□□ -1.23
SSX3-201ENST00000298396 DDX19BQ9UMR2 479 aa7.39□□□□□ -1.23
SSX3-201ENST00000298396 RNF40O75150 1001 aa7.38□□□□□ -1.23
SSX3-201ENST00000298396 GNAI2P04899 355 aa7.38□□□□□ -1.23
SSX3-201ENST00000298396 PTPN12Q05209 780 aaKnown RBP7.38□□□□□ -1.23
SSX3-201ENST00000298396 PPP2R2DQ66LE6 453 aa7.38□□□□□ -1.23
SSX3-201ENST00000298396 TTLL6Q8N841 843 aa7.38□□□□□ -1.23
SSX3-201ENST00000298396 RPGRQ92834 1020 aaKnown RBP7.38□□□□□ -1.23
SSX3-201ENST00000298396 PIM2Q9P1W9 311 aa7.38□□□□□ -1.23
SSX3-201ENST00000298396 LIMD1Q9UGP4 676 aa7.38□□□□□ -1.23
SSX3-201ENST00000298396 PDZRN3Q9UPQ7 1066 aa7.38□□□□□ -1.23
SSX3-201ENST00000298396 PA2G4Q9UQ80 394 aaKnown RBP7.38□□□□□ -1.23
SSX3-201ENST00000298396 PCDHB15Q9Y5E8 787 aa7.38□□□□□ -1.23
SSX3-201ENST00000298396 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.38□□□□□ -1.23
SSX3-201ENST00000298396 NFKBIEO00221 500 aa7.37□□□□□ -1.23
SSX3-201ENST00000298396 PPEF1O14829 653 aaPredicted RBP7.37□□□□□ -1.23
SSX3-201ENST00000298396 CENPBP07199 599 aaPredicted RBP7.37□□□□□ -1.23
SSX3-201ENST00000298396 RPS8P62241 208 aaKnown RBP7.37□□□□□ -1.23
SSX3-201ENST00000298396 ATP8B2P98198 1209 aa7.37□□□□□ -1.23
SSX3-201ENST00000298396 GRIPAP1Q4V328 841 aa7.37□□□□□ -1.23
SSX3-201ENST00000298396 LRRC24Q50LG9 513 aa7.37□□□□□ -1.23
SSX3-201ENST00000298396 DALRD3Q5D0E6 543 aaKnown RBP7.37□□□□□ -1.23
SSX3-201ENST00000298396 DDX46Q7L014 1031 aaKnown RBP7.37□□□□□ -1.23
SSX3-201ENST00000298396 ATG9AQ7Z3C6 839 aa7.37□□□□□ -1.23
SSX3-201ENST00000298396 SSH3Q8TE77 659 aa7.37□□□□□ -1.23
SSX3-201ENST00000298396 CNKSR1Q969H4 720 aa7.37□□□□□ -1.23
SSX3-201ENST00000298396 CHMP3Q9Y3E7 222 aa7.37□□□□□ -1.23
SSX3-201ENST00000298396 MYH7P12883 1935 aa7.37□□□□□ -1.23
SSX3-201ENST00000298396 IRS2Q9Y4H2 1338 aa7.36□□□□□ -1.23
SSX3-201ENST00000298396 ANKRD18BA2A2Z9 1011 aa7.36□□□□□ -1.23
SSX3-201ENST00000298396 SNAP23O00161 211 aa7.36□□□□□ -1.23
SSX3-201ENST00000298396 SRGAP3O43295 1099 aa7.36□□□□□ -1.23
SSX3-201ENST00000298396 C21orf2O43822 256 aa7.36□□□□□ -1.23
SSX3-201ENST00000298396 HSP90B1P14625 803 aaKnown RBP7.36□□□□□ -1.23
SSX3-201ENST00000298396 GPSM2P81274 684 aa7.36□□□□□ -1.23
SSX3-201ENST00000298396 IFIT5Q13325 482 aaKnown RBP7.36□□□□□ -1.23
SSX3-201ENST00000298396 PRPF38BQ5VTL8 546 aaKnown RBP7.36□□□□□ -1.23
SSX3-201ENST00000298396 VGLL2Q8N8G2 317 aa7.36□□□□□ -1.23
SSX3-201ENST00000298396 BSDC1Q9NW68 430 aaPredicted RBP7.36□□□□□ -1.23
SSX3-201ENST00000298396 PCDHGC3Q9UN70 934 aa7.36□□□□□ -1.23
SSX3-201ENST00000298396 BCS1LQ9Y276 419 aa7.36□□□□□ -1.23
SSX3-201ENST00000298396 ATP6V0A2Q9Y487 856 aa7.36□□□□□ -1.23
SSX3-201ENST00000298396 RIPOR2Q9Y4F9 1068 aa7.36□□□□□ -1.23
SSX3-201ENST00000298396 AK9Q5TCS8 1911 aa7.35□□□□□ -1.23
SSX3-201ENST00000298396 BBOX1O75936 387 aa7.35□□□□□ -1.23
SSX3-201ENST00000298396 FDX1P10109 184 aa7.35□□□□□ -1.23
SSX3-201ENST00000298396 NDUFV2P19404 249 aa7.35□□□□□ -1.23
SSX3-201ENST00000298396 ALDH1B1P30837 517 aa7.35□□□□□ -1.23
SSX3-201ENST00000298396 RASSF7Q02833 373 aa7.35□□□□□ -1.23
SSX3-201ENST00000298396 CCDC57Q2TAC2 916 aa7.35□□□□□ -1.23
SSX3-201ENST00000298396 ANKRD18AQ8IVF6 992 aa7.35□□□□□ -1.23
SSX3-201ENST00000298396 SP8Q8IXZ3 490 aa7.35□□□□□ -1.23
SSX3-201ENST00000298396 HELBQ8NG08 1087 aaPredicted RBP7.35□□□□□ -1.23
SSX3-201ENST00000298396 HLA-CQ95604 372 aa7.35□□□□□ -1.23
SSX3-201ENST00000298396 THAP11Q96EK4 314 aa7.35□□□□□ -1.23
SSX3-201ENST00000298396 PCMTD1Q96MG8 357 aaPredicted RBP7.35□□□□□ -1.23
SSX3-201ENST00000298396 GPR101Q96P66 508 aaPredicted RBP7.35□□□□□ -1.23
SSX3-201ENST00000298396 CDC5LQ99459 802 aaKnown RBP7.35□□□□□ -1.23
SSX3-201ENST00000298396 COPRSQ9NQ92 184 aa7.35□□□□□ -1.23
SSX3-201ENST00000298396 HCSTQ9UBK5 93 aa7.35□□□□□ -1.23
SSX3-201ENST00000298396 POLLQ9UGP5 575 aa7.35□□□□□ -1.23
SSX3-201ENST00000298396 MINPP1Q9UNW1 487 aa7.35□□□□□ -1.23
SSX3-201ENST00000298396 DOCK2Q92608 1830 aa7.35□□□□□ -1.23
SSX3-201ENST00000298396 ADAMTSL1Q8N6G6 1762 aa7.35□□□□□ -1.23
SSX3-201ENST00000298396 POLR2AP24928 1970 aaKnown RBP7.35□□□□□ -1.23
SSX3-201ENST00000298396 ZNF609O15014 1411 aa7.35□□□□□ -1.23
SSX3-201ENST00000298396 EYA2O00167 538 aa7.34□□□□□ -1.23
SSX3-201ENST00000298396 LILRB3O75022 631 aa7.34□□□□□ -1.23
SSX3-201ENST00000298396 TAF5LO75529 589 aa7.34□□□□□ -1.23
SSX3-201ENST00000298396 SASH1O94885 1247 aa7.34□□□□□ -1.23
SSX3-201ENST00000298396 KLRK1P26718 216 aa7.34□□□□□ -1.23
SSX3-201ENST00000298396 CHRNDQ07001 517 aa7.34□□□□□ -1.23
SSX3-201ENST00000298396 PROCA1Q8NCQ7 364 aaPredicted RBP7.34□□□□□ -1.23
SSX3-201ENST00000298396 RTFDC1Q9BY42 306 aaPredicted RBP7.34□□□□□ -1.23
SSX3-201ENST00000298396 SIL1Q9H173 461 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms