RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 FANCLQ9NW38 375 aa15.35■□□□□ 0.05
TNFRSF21-201ENST00000296861 CARMIL3Q8ND23 1372 aa15.35■□□□□ 0.05
TNFRSF21-201ENST00000296861 CCDC66A2RUB6 948 aa15.35■□□□□ 0.05
TNFRSF21-201ENST00000296861 NEMFO60524 1076 aa15.35■□□□□ 0.05
TNFRSF21-201ENST00000296861 PHACTR2O75167 634 aa15.35■□□□□ 0.05
TNFRSF21-201ENST00000296861 IARSP41252 1262 aaKnown RBP15.35■□□□□ 0.05
TNFRSF21-201ENST00000296861 TNNT3P45378 269 aaPredicted RBP15.35■□□□□ 0.05
TNFRSF21-201ENST00000296861 AKAP17AQ02040 695 aaKnown RBP15.35■□□□□ 0.05
TNFRSF21-201ENST00000296861 TMEM67Q5HYA8 995 aa15.35■□□□□ 0.05
TNFRSF21-201ENST00000296861 KCNG4Q8TDN1 519 aa15.35■□□□□ 0.05
TNFRSF21-201ENST00000296861 DPF2Q92785 391 aa15.35■□□□□ 0.05
TNFRSF21-201ENST00000296861 PPP1R13BQ96KQ4 1090 aa15.35■□□□□ 0.05
TNFRSF21-201ENST00000296861 ZCCHC17Q9NP64 241 aaKnown RBP15.35■□□□□ 0.05
TNFRSF21-201ENST00000296861 COL15A1P39059 1388 aa15.35■□□□□ 0.05
TNFRSF21-201ENST00000296861 MCM6Q14566 821 aa15.35■□□□□ 0.05
TNFRSF21-201ENST00000296861 MRFAP1L1Q96HT8 127 aa15.35■□□□□ 0.05
TNFRSF21-201ENST00000296861 NPHP4O75161 1426 aaPredicted RBP15.35■□□□□ 0.05
TNFRSF21-201ENST00000296861 EYA2O00167 538 aa15.34■□□□□ 0.05
TNFRSF21-201ENST00000296861 FOXN1O15353 648 aa15.34■□□□□ 0.05
TNFRSF21-201ENST00000296861 CTIFO43310 598 aaKnown RBP15.34■□□□□ 0.05
TNFRSF21-201ENST00000296861 NAA16Q6N069 864 aaPredicted RBP15.34■□□□□ 0.05
TNFRSF21-201ENST00000296861 MIGA1Q8NAN2 632 aa15.34■□□□□ 0.05
TNFRSF21-201ENST00000296861 ERO1AQ96HE7 468 aa15.34■□□□□ 0.05
TNFRSF21-201ENST00000296861 KIF28PB7ZC32 967 aa15.34■□□□□ 0.05
TNFRSF21-201ENST00000296861 IL15P40933 162 aaPredicted RBP15.34■□□□□ 0.05
TNFRSF21-201ENST00000296861 TDO2P48775 406 aa15.34■□□□□ 0.05
TNFRSF21-201ENST00000296861 VPS37DQ86XT2 251 aa15.34■□□□□ 0.05
TNFRSF21-201ENST00000296861 CCDC12Q8WUD4 166 aaPredicted RBP15.34■□□□□ 0.05
TNFRSF21-201ENST00000296861 HINFPQ9BQA5 517 aa15.34■□□□□ 0.05
TNFRSF21-201ENST00000296861 CCZ1BP86790 482 aa15.34■□□□□ 0.05
TNFRSF21-201ENST00000296861 CCZ1P86791 482 aaPredicted RBP15.34■□□□□ 0.05
TNFRSF21-201ENST00000296861 LINC00301Q8NCQ3 95 aa15.34■□□□□ 0.05
TNFRSF21-201ENST00000296861 NEK11Q8NG66 645 aa15.34■□□□□ 0.05
TNFRSF21-201ENST00000296861 CTDSPL2Q05D32 466 aa15.33■□□□□ 0.04
TNFRSF21-201ENST00000296861 LRRFIP1Q32MZ4 808 aaKnown RBP15.33■□□□□ 0.04
TNFRSF21-201ENST00000296861 ADALQ6DHV7 355 aa15.33■□□□□ 0.04
TNFRSF21-201ENST00000296861 EEF2KMTQ96G04 330 aa15.33■□□□□ 0.04
TNFRSF21-201ENST00000296861 CAVIN2O95810 425 aa15.33■□□□□ 0.04
TNFRSF21-201ENST00000296861 PHKG2P15735 406 aa15.33■□□□□ 0.04
TNFRSF21-201ENST00000296861 ARMCX5Q6P1M9 558 aa15.33■□□□□ 0.04
TNFRSF21-201ENST00000296861 ARHGAP23Q9P227 1491 aa15.33■□□□□ 0.04
TNFRSF21-201ENST00000296861 CASP1P29466 404 aa15.33■□□□□ 0.04
TNFRSF21-201ENST00000296861 EVCP57679 992 aa15.33■□□□□ 0.04
TNFRSF21-201ENST00000296861 CCDC102BQ68D86 513 aa15.33■□□□□ 0.04
TNFRSF21-201ENST00000296861 KRT40Q6A162 431 aa15.33■□□□□ 0.04
TNFRSF21-201ENST00000296861 JMYQ8N9B5 988 aa15.33■□□□□ 0.04
TNFRSF21-201ENST00000296861 MAPK8IP1Q9UQF2 711 aa15.33■□□□□ 0.04
TNFRSF21-201ENST00000296861 USP42Q9H9J4 1324 aaKnown RBP15.32■□□□□ 0.04
TNFRSF21-201ENST00000296861 FDPSP14324 419 aaKnown RBP15.32■□□□□ 0.04
TNFRSF21-201ENST00000296861 FBXO18Q8NFZ0 1043 aa15.32■□□□□ 0.04
TNFRSF21-201ENST00000296861 NAPBQ9H115 298 aa15.32■□□□□ 0.04
TNFRSF21-201ENST00000296861 SENP2Q9HC62 589 aa15.32■□□□□ 0.04
TNFRSF21-201ENST00000296861 DDX41Q9UJV9 622 aaKnown RBP15.32■□□□□ 0.04
TNFRSF21-201ENST00000296861 TBC1D2BQ9UPU7 963 aa15.32■□□□□ 0.04
TNFRSF21-201ENST00000296861 SLC12A7Q9Y666 1083 aa15.32■□□□□ 0.04
TNFRSF21-201ENST00000296861 MED23Q9ULK4 1368 aa15.32■□□□□ 0.04
TNFRSF21-201ENST00000296861 CASQ1P31415 396 aa15.32■□□□□ 0.04
TNFRSF21-201ENST00000296861 E4F1Q66K89 784 aaPredicted RBP15.32■□□□□ 0.04
TNFRSF21-201ENST00000296861 ZBTB43O43298 467 aa15.31■□□□□ 0.04
TNFRSF21-201ENST00000296861 CCDC150Q8NCX0 1101 aa15.31■□□□□ 0.04
TNFRSF21-201ENST00000296861 POLR2DO15514 142 aaKnown RBP15.31■□□□□ 0.04
TNFRSF21-201ENST00000296861 BMS1Q14692 1282 aaKnown RBP15.31■□□□□ 0.04
TNFRSF21-201ENST00000296861 FMR1NBQ8N0W7 255 aaPredicted RBP15.31■□□□□ 0.04
TNFRSF21-201ENST00000296861 DHX58Q96C10 678 aa15.31■□□□□ 0.04
TNFRSF21-201ENST00000296861 LLPHQ9BRT6 129 aaKnown RBP15.31■□□□□ 0.04
TNFRSF21-201ENST00000296861 SLIT1O75093 1534 aa15.31■□□□□ 0.04
TNFRSF21-201ENST00000296861 ERICH2A1L162 156 aa15.31■□□□□ 0.04
TNFRSF21-201ENST00000296861 WDHD1O75717 1129 aaPredicted RBP15.31■□□□□ 0.04
TNFRSF21-201ENST00000296861 IRX2Q9BZI1 471 aaPredicted RBP15.31■□□□□ 0.04
TNFRSF21-201ENST00000296861 PCDHA5Q9Y5H7 936 aa15.31■□□□□ 0.04
TNFRSF21-201ENST00000296861 TMEM94Q12767 1356 aa15.31■□□□□ 0.04
TNFRSF21-201ENST00000296861 BTBD18B2RXH4 712 aa15.3■□□□□ 0.04
TNFRSF21-201ENST00000296861 CYP27B1O15528 508 aa15.3■□□□□ 0.04
TNFRSF21-201ENST00000296861 ZMYM1Q5SVZ6 1142 aa15.3■□□□□ 0.04
TNFRSF21-201ENST00000296861 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.3■□□□□ 0.04
TNFRSF21-201ENST00000296861 HELLSQ9NRZ9 838 aa15.3■□□□□ 0.04
TNFRSF21-201ENST00000296861 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.3■□□□□ 0.04
TNFRSF21-201ENST00000296861 CEMIPQ8WUJ3 1361 aa15.3■□□□□ 0.04
TNFRSF21-201ENST00000296861 MYL5Q02045 173 aa15.3■□□□□ 0.04
TNFRSF21-201ENST00000296861 GABPB1Q06547 395 aaPredicted RBP15.3■□□□□ 0.04
TNFRSF21-201ENST00000296861 PLBD2Q8NHP8 589 aa15.3■□□□□ 0.04
TNFRSF21-201ENST00000296861 TRMT112Q9UI30 125 aaKnown RBP15.3■□□□□ 0.04
TNFRSF21-201ENST00000296861 CLCN6P51797 869 aa15.3■□□□□ 0.04
TNFRSF21-201ENST00000296861 SMYD4Q8IYR2 804 aaPredicted RBP15.3■□□□□ 0.04
TNFRSF21-201ENST00000296861 NFE2L3Q9Y4A8 694 aa15.3■□□□□ 0.04
TNFRSF21-201ENST00000296861 ANKARQ7Z5J8 1434 aa15.29■□□□□ 0.04
TNFRSF21-201ENST00000296861 PRDM1O75626 825 aa15.29■□□□□ 0.04
TNFRSF21-201ENST00000296861 RHOXF2BP0C7M4 288 aa15.29■□□□□ 0.04
TNFRSF21-201ENST00000296861 LMAN1P49257 510 aa15.29■□□□□ 0.04
TNFRSF21-201ENST00000296861 NLRP12P59046 1061 aa15.29■□□□□ 0.04
TNFRSF21-201ENST00000296861 FAM193AP78312 1265 aa15.29■□□□□ 0.04
TNFRSF21-201ENST00000296861 KIF4BQ2VIQ3 1234 aa15.29■□□□□ 0.04
TNFRSF21-201ENST00000296861 RHOXF2Q9BQY4 288 aa15.29■□□□□ 0.04
TNFRSF21-201ENST00000296861 MON2Q7Z3U7 1717 aa15.29■□□□□ 0.04
TNFRSF21-201ENST00000296861 KIF6Q6ZMV9 814 aa15.29■□□□□ 0.04
TNFRSF21-201ENST00000296861 PCMTD1Q96MG8 357 aaPredicted RBP15.29■□□□□ 0.04
TNFRSF21-201ENST00000296861 KCNH3Q9ULD8 1083 aa15.29■□□□□ 0.04
TNFRSF21-201ENST00000296861 CCT6AP40227 531 aaKnown RBP15.29■□□□□ 0.04
TNFRSF21-201ENST00000296861 PPARDQ03181 441 aa15.29■□□□□ 0.04
TNFRSF21-201ENST00000296861 ILDR1Q86SU0 546 aaPredicted RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms