RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 TTF2Q9UNY4 1162 aaKnown RBP18.31■□□□□ 0.52
CCDC140-201ENST00000295226 ZNF532Q9HCE3 1301 aa18.3■□□□□ 0.52
CCDC140-201ENST00000295226 SHTN1A0MZ66 631 aa18.3■□□□□ 0.52
CCDC140-201ENST00000295226 ADD2P35612 726 aa18.3■□□□□ 0.52
CCDC140-201ENST00000295226 NMIQ13287 307 aaPredicted RBP18.3■□□□□ 0.52
CCDC140-201ENST00000295226 TNIP1Q15025 636 aa18.3■□□□□ 0.52
CCDC140-201ENST00000295226 CWC27Q6UX04 472 aaKnown RBP18.3■□□□□ 0.52
CCDC140-201ENST00000295226 ADGRA1Q86SQ6 560 aa18.3■□□□□ 0.52
CCDC140-201ENST00000295226 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.3■□□□□ 0.52
CCDC140-201ENST00000295226 PSME4Q14997 1843 aa18.3■□□□□ 0.52
CCDC140-201ENST00000295226 DOCK2Q92608 1830 aa18.3■□□□□ 0.52
CCDC140-201ENST00000295226 TCRBV5S4A2TA0A5A2 114 aa18.29■□□□□ 0.52
CCDC140-201ENST00000295226 CDC45O75419 566 aa18.29■□□□□ 0.52
CCDC140-201ENST00000295226 CYP7A1P22680 504 aa18.29■□□□□ 0.52
CCDC140-201ENST00000295226 NAA16Q6N069 864 aaPredicted RBP18.29■□□□□ 0.52
CCDC140-201ENST00000295226 GMLQ99445 158 aa18.29■□□□□ 0.52
CCDC140-201ENST00000295226 IL25Q9H293 177 aa18.29■□□□□ 0.52
CCDC140-201ENST00000295226 DIAPH3Q9NSV4 1193 aa18.29■□□□□ 0.52
CCDC140-201ENST00000295226 MYH7P12883 1935 aa18.29■□□□□ 0.52
CCDC140-201ENST00000295226 A0A0D9SFI3 127 aa18.28■□□□□ 0.52
CCDC140-201ENST00000295226 DCAF8L1A6NGE4 600 aa18.28■□□□□ 0.52
CCDC140-201ENST00000295226 DDNO94850 711 aaPredicted RBP18.28■□□□□ 0.52
CCDC140-201ENST00000295226 FKBP1AP62942 108 aaKnown RBP18.28■□□□□ 0.52
CCDC140-201ENST00000295226 OSBP2Q969R2 916 aa18.28■□□□□ 0.52
CCDC140-201ENST00000295226 PCDHAC2Q9Y5I4 1007 aa18.28■□□□□ 0.52
CCDC140-201ENST00000295226 ANP32AP39687 249 aaKnown RBP18.28■□□□□ 0.52
CCDC140-201ENST00000295226 GMPSP49915 693 aaPredicted RBP18.28■□□□□ 0.52
CCDC140-201ENST00000295226 CCDC129Q6ZRS4 1044 aa18.28■□□□□ 0.52
CCDC140-201ENST00000295226 MIGA1Q8NAN2 632 aa18.28■□□□□ 0.52
CCDC140-201ENST00000295226 PUS7LQ9H0K6 701 aaKnown RBP18.28■□□□□ 0.52
CCDC140-201ENST00000295226 TIAM2Q8IVF5 1701 aa18.27■□□□□ 0.52
CCDC140-201ENST00000295226 M0R2C6 588 aa18.27■□□□□ 0.52
CCDC140-201ENST00000295226 C8orf34Q49A92 452 aa18.27■□□□□ 0.52
CCDC140-201ENST00000295226 ZMYM1Q5SVZ6 1142 aa18.27■□□□□ 0.52
CCDC140-201ENST00000295226 UBE3CQ15386 1083 aa18.26■□□□□ 0.51
CCDC140-201ENST00000295226 ZSCAN25Q6NSZ9 544 aa18.26■□□□□ 0.51
CCDC140-201ENST00000295226 BACH2Q9BYV9 841 aa18.26■□□□□ 0.51
CCDC140-201ENST00000295226 MYH2Q9UKX2 1941 aa18.26■□□□□ 0.51
CCDC140-201ENST00000295226 ZFYP08048 801 aaPredicted RBP18.25■□□□□ 0.51
CCDC140-201ENST00000295226 DYNLL1P63167 89 aaKnown RBP18.25■□□□□ 0.51
CCDC140-201ENST00000295226 APPBP2Q92624 585 aa18.25■□□□□ 0.51
CCDC140-201ENST00000295226 SUGT1Q9Y2Z0 365 aa18.25■□□□□ 0.51
CCDC140-201ENST00000295226 ADAMTSL1Q8N6G6 1762 aa18.25■□□□□ 0.51
CCDC140-201ENST00000295226 LRRFIP1Q32MZ4 808 aaKnown RBP18.25■□□□□ 0.51
CCDC140-201ENST00000295226 ZNF589Q86UQ0 364 aaPredicted RBP18.25■□□□□ 0.51
CCDC140-201ENST00000295226 AGBL3Q8NEM8 1001 aa18.25■□□□□ 0.51
CCDC140-201ENST00000295226 MAST3O60307 1309 aa18.24■□□□□ 0.51
CCDC140-201ENST00000295226 MYO3BQ8WXR4 1341 aa18.24■□□□□ 0.51
CCDC140-201ENST00000295226 HIP1O00291 1037 aa18.24■□□□□ 0.51
CCDC140-201ENST00000295226 SEC24BO95487 1268 aa18.24■□□□□ 0.51
CCDC140-201ENST00000295226 USP17L8P0C7I0 530 aa18.24■□□□□ 0.51
CCDC140-201ENST00000295226 CRKP46108 304 aa18.24■□□□□ 0.51
CCDC140-201ENST00000295226 RBM5P52756 815 aaKnown RBP eCLIP18.24■□□□□ 0.51
CCDC140-201ENST00000295226 GPC2Q8N158 579 aa18.24■□□□□ 0.51
CCDC140-201ENST00000295226 ESYT1Q9BSJ8 1104 aa18.24■□□□□ 0.51
CCDC140-201ENST00000295226 AATFQ9NY61 560 aaKnown RBP eCLIP18.24■□□□□ 0.51
CCDC140-201ENST00000295226 DAGLAQ9Y4D2 1042 aa18.24■□□□□ 0.51
CCDC140-201ENST00000295226 RFX7Q2KHR2 1363 aa18.23■□□□□ 0.51
CCDC140-201ENST00000295226 GSTO1P78417 241 aa18.23■□□□□ 0.51
CCDC140-201ENST00000295226 MCMDC2Q4G0Z9 681 aa18.23■□□□□ 0.51
CCDC140-201ENST00000295226 RBM26Q5T8P6 1007 aaKnown RBP18.23■□□□□ 0.51
CCDC140-201ENST00000295226 CASC1Q6TDU7 716 aa18.23■□□□□ 0.51
CCDC140-201ENST00000295226 ARMT1Q9H993 441 aa18.23■□□□□ 0.51
CCDC140-201ENST00000295226 CNOT7Q9UIV1 285 aaKnown RBP18.23■□□□□ 0.51
CCDC140-201ENST00000295226 MROH7-TTC4A0A0A0MT08 1334 aa18.22■□□□□ 0.51
CCDC140-201ENST00000295226 MBD4O95243 580 aa18.22■□□□□ 0.51
CCDC140-201ENST00000295226 EGFRP00533 1210 aa18.22■□□□□ 0.51
CCDC140-201ENST00000295226 CFAP100Q494V2 611 aa18.22■□□□□ 0.51
CCDC140-201ENST00000295226 MICALL2Q8IY33 904 aa18.22■□□□□ 0.51
CCDC140-201ENST00000295226 LCORLQ8N3X6 602 aa18.22■□□□□ 0.51
CCDC140-201ENST00000295226 TEKT1Q969V4 418 aa18.22■□□□□ 0.51
CCDC140-201ENST00000295226 HELLSQ9NRZ9 838 aa18.22■□□□□ 0.51
CCDC140-201ENST00000295226 MAGEB6P1A0A0J9YX57 407 aa18.22■□□□□ 0.51
CCDC140-201ENST00000295226 SGSM2O43147 1006 aa18.22■□□□□ 0.51
CCDC140-201ENST00000295226 LDHCP07864 332 aa18.22■□□□□ 0.51
CCDC140-201ENST00000295226 RPS12P25398 132 aaKnown RBP18.22■□□□□ 0.51
CCDC140-201ENST00000295226 BTDP43251 543 aa18.22■□□□□ 0.51
CCDC140-201ENST00000295226 SAMD7Q7Z3H4 446 aa18.22■□□□□ 0.51
CCDC140-201ENST00000295226 OGFOD1Q8N543 542 aa18.22■□□□□ 0.51
CCDC140-201ENST00000295226 MAST2Q6P0Q8 1798 aa18.21■□□□□ 0.51
CCDC140-201ENST00000295226 GAKO14976 1311 aa18.21■□□□□ 0.51
CCDC140-201ENST00000295226 GPAA1O43292 621 aa18.21■□□□□ 0.51
CCDC140-201ENST00000295226 PRKAB2O43741 272 aa18.21■□□□□ 0.51
CCDC140-201ENST00000295226 EPS15P42566 896 aa18.21■□□□□ 0.51
CCDC140-201ENST00000295226 VPS53Q5VIR6 699 aa18.21■□□□□ 0.51
CCDC140-201ENST00000295226 APOBEC3HQ6NTF7 200 aaKnown RBP18.21■□□□□ 0.51
CCDC140-201ENST00000295226 DPY19L2Q6NUT2 758 aa18.21■□□□□ 0.51
CCDC140-201ENST00000295226 RUFY2Q8WXA3 655 aa18.21■□□□□ 0.51
CCDC140-201ENST00000295226 DPF2Q92785 391 aa18.21■□□□□ 0.51
CCDC140-201ENST00000295226 AIDAQ96BJ3 306 aa18.21■□□□□ 0.51
CCDC140-201ENST00000295226 FAM163AQ96GL9 167 aaPredicted RBP18.21■□□□□ 0.51
CCDC140-201ENST00000295226 PRMT6Q96LA8 375 aaPredicted RBP18.21■□□□□ 0.51
CCDC140-201ENST00000295226 RIOK1Q9BRS2 568 aaKnown RBP18.21■□□□□ 0.51
CCDC140-201ENST00000295226 ANP32EQ9BTT0 268 aa18.21■□□□□ 0.51
CCDC140-201ENST00000295226 HDAC9Q9UKV0 1011 aa18.21■□□□□ 0.51
CCDC140-201ENST00000295226 GPR75-ASB3A0A0A6YYF3 556 aa18.2■□□□□ 0.5
CCDC140-201ENST00000295226 TBC1D10BQ4KMP7 808 aaPredicted RBP18.2■□□□□ 0.5
CCDC140-201ENST00000295226 HHIPL2Q6UWX4 724 aa18.2■□□□□ 0.5
CCDC140-201ENST00000295226 SLF2Q8IX21 1173 aa18.2■□□□□ 0.5
CCDC140-201ENST00000295226 SH3RF3Q8TEJ3 882 aaPredicted RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms