RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 TOB2Q14106 344 aaPredicted RBP10.84□□□□□ -0.67
PDPN-201ENST00000294489 LAMB1P07942 1786 aa10.84□□□□□ -0.67
PDPN-201ENST00000294489 KIF13BQ9NQT8 1826 aa10.84□□□□□ -0.67
PDPN-201ENST00000294489 STX6O43752 255 aa10.84□□□□□ -0.67
PDPN-201ENST00000294489 KLRK1P26718 216 aa10.84□□□□□ -0.67
PDPN-201ENST00000294489 GJB2P29033 226 aa10.84□□□□□ -0.67
PDPN-201ENST00000294489 FGD1P98174 961 aa10.84□□□□□ -0.67
PDPN-201ENST00000294489 KLHL34Q8N239 644 aa10.84□□□□□ -0.67
PDPN-201ENST00000294489 RPGRQ92834 1020 aaKnown RBP10.84□□□□□ -0.67
PDPN-201ENST00000294489 TCEANC2Q96MN5 208 aa10.84□□□□□ -0.67
PDPN-201ENST00000294489 ATP6V1DQ9Y5K8 247 aa10.84□□□□□ -0.67
PDPN-201ENST00000294489 FGAP02671 866 aa10.84□□□□□ -0.67
PDPN-201ENST00000294489 IDH1O75874 414 aaKnown RBP10.83□□□□□ -0.68
PDPN-201ENST00000294489 ZSCAN22P10073 491 aaPredicted RBP10.83□□□□□ -0.68
PDPN-201ENST00000294489 NCLP19338 710 aaKnown RBP10.83□□□□□ -0.68
PDPN-201ENST00000294489 SYT1P21579 422 aa10.83□□□□□ -0.68
PDPN-201ENST00000294489 ST3GAL1Q11201 340 aa10.83□□□□□ -0.68
PDPN-201ENST00000294489 NECAB1Q8N987 351 aa10.83□□□□□ -0.68
PDPN-201ENST00000294489 WDR19Q8NEZ3 1342 aa10.83□□□□□ -0.68
PDPN-201ENST00000294489 E7EWF7 191 aa10.83□□□□□ -0.68
PDPN-201ENST00000294489 HIBADHP31937 336 aaKnown RBP10.83□□□□□ -0.68
PDPN-201ENST00000294489 MAGEB6Q8N7X4 407 aa10.83□□□□□ -0.68
PDPN-201ENST00000294489 A0A0G2JLW4 131 aa10.82□□□□□ -0.68
PDPN-201ENST00000294489 FSD2A1L4K1 749 aa10.82□□□□□ -0.68
PDPN-201ENST00000294489 GPSM2P81274 684 aa10.82□□□□□ -0.68
PDPN-201ENST00000294489 SLC15A2Q16348 729 aa10.82□□□□□ -0.68
PDPN-201ENST00000294489 DHX32Q7L7V1 743 aaKnown RBP10.82□□□□□ -0.68
PDPN-201ENST00000294489 NBPF3Q9H094 633 aa10.82□□□□□ -0.68
PDPN-201ENST00000294489 CDK5RAP2Q96SN8 1893 aa10.82□□□□□ -0.68
PDPN-201ENST00000294489 NPHP1O15259 732 aa10.82□□□□□ -0.68
PDPN-201ENST00000294489 SRGNP10124 158 aa10.82□□□□□ -0.68
PDPN-201ENST00000294489 PDCP20941 246 aa10.82□□□□□ -0.68
PDPN-201ENST00000294489 ATP2B4P23634 1241 aa10.82□□□□□ -0.68
PDPN-201ENST00000294489 EZH2Q15910 746 aaKnown RBP10.82□□□□□ -0.68
PDPN-201ENST00000294489 IMMTQ16891 758 aaKnown RBP10.82□□□□□ -0.68
PDPN-201ENST00000294489 Q6ZUG5 572 aa10.82□□□□□ -0.68
PDPN-201ENST00000294489 TXNRD3Q86VQ6 643 aa10.82□□□□□ -0.68
PDPN-201ENST00000294489 SP8Q8IXZ3 490 aa10.82□□□□□ -0.68
PDPN-201ENST00000294489 TDRD7Q8NHU6 1098 aaKnown RBP10.82□□□□□ -0.68
PDPN-201ENST00000294489 ZNF384Q8TF68 577 aa10.82□□□□□ -0.68
PDPN-201ENST00000294489 ANO8Q9HCE9 1232 aaPredicted RBP10.82□□□□□ -0.68
PDPN-201ENST00000294489 PATL2C9JE40 543 aaKnown RBP10.82□□□□□ -0.68
PDPN-201ENST00000294489 GNAT2P19087 354 aa10.82□□□□□ -0.68
PDPN-201ENST00000294489 EVCP57679 992 aa10.82□□□□□ -0.68
PDPN-201ENST00000294489 TTLL5Q6EMB2 1281 aa10.82□□□□□ -0.68
PDPN-201ENST00000294489 FOCADQ5VW36 1801 aa10.81□□□□□ -0.68
PDPN-201ENST00000294489 MBD3O95983 291 aa10.81□□□□□ -0.68
PDPN-201ENST00000294489 NPR1P16066 1061 aa10.81□□□□□ -0.68
PDPN-201ENST00000294489 SLC51AQ86UW1 340 aa10.81□□□□□ -0.68
PDPN-201ENST00000294489 IL1R1P14778 569 aa10.81□□□□□ -0.68
PDPN-201ENST00000294489 MRE11P49959 708 aa10.81□□□□□ -0.68
PDPN-201ENST00000294489 DDX60LQ5H9U9 1706 aaKnown RBP10.81□□□□□ -0.68
PDPN-201ENST00000294489 GSG1L2A8MUP6 293 aa10.8□□□□□ -0.68
PDPN-201ENST00000294489 F13A1P00488 732 aa10.8□□□□□ -0.68
PDPN-201ENST00000294489 MMP10P09238 476 aa10.8□□□□□ -0.68
PDPN-201ENST00000294489 PDE6BP35913 854 aa10.8□□□□□ -0.68
PDPN-201ENST00000294489 STK3Q13188 491 aa10.8□□□□□ -0.68
PDPN-201ENST00000294489 LARP1BQ659C4 914 aaKnown RBP10.8□□□□□ -0.68
PDPN-201ENST00000294489 ADGRA1Q86SQ6 560 aa10.8□□□□□ -0.68
PDPN-201ENST00000294489 MB21D2Q8IYB1 491 aaPredicted RBP10.8□□□□□ -0.68
PDPN-201ENST00000294489 RIOK1Q9BRS2 568 aaKnown RBP10.8□□□□□ -0.68
PDPN-201ENST00000294489 EPB41L4AQ9HCS5 686 aaPredicted RBP10.8□□□□□ -0.68
PDPN-201ENST00000294489 ATP6V0A2Q9Y487 856 aa10.8□□□□□ -0.68
PDPN-201ENST00000294489 EN1Q05925 392 aaPredicted RBP10.8□□□□□ -0.68
PDPN-201ENST00000294489 FOXD4L6Q3SYB3 417 aaPredicted RBP10.8□□□□□ -0.68
PDPN-201ENST00000294489 CAVIN1Q6NZI2 390 aaKnown RBP10.8□□□□□ -0.68
PDPN-201ENST00000294489 FOXD4L3Q6VB84 417 aaPredicted RBP10.8□□□□□ -0.68
PDPN-201ENST00000294489 BRF1Q92994 677 aa10.8□□□□□ -0.68
PDPN-201ENST00000294489 AIDAQ96BJ3 306 aa10.8□□□□□ -0.68
PDPN-201ENST00000294489 NSUN4Q96CB9 384 aaKnown RBP10.8□□□□□ -0.68
PDPN-201ENST00000294489 CHAMP1Q96JM3 812 aa10.8□□□□□ -0.68
PDPN-201ENST00000294489 LRP2BPQ9P2M1 347 aa10.8□□□□□ -0.68
PDPN-201ENST00000294489 PARP3Q9Y6F1 533 aa10.8□□□□□ -0.68
PDPN-201ENST00000294489 MBD4O95243 580 aa10.8□□□□□ -0.68
PDPN-201ENST00000294489 VPS37DQ86XT2 251 aa10.8□□□□□ -0.68
PDPN-201ENST00000294489 GTF3C6Q969F1 213 aa10.8□□□□□ -0.68
PDPN-201ENST00000294489 CHMP4CQ96CF2 233 aa10.8□□□□□ -0.68
PDPN-201ENST00000294489 ANKIB1Q9P2G1 1089 aa10.8□□□□□ -0.68
PDPN-201ENST00000294489 VPS37CA5D8V6 355 aaPredicted RBP10.79□□□□□ -0.68
PDPN-201ENST00000294489 ZNF213O14771 459 aa10.79□□□□□ -0.68
PDPN-201ENST00000294489 PPEF1O14829 653 aaPredicted RBP10.79□□□□□ -0.68
PDPN-201ENST00000294489 IFNL3Q8IZI9 196 aa10.79□□□□□ -0.68
PDPN-201ENST00000294489 LCORLQ8N3X6 602 aa10.79□□□□□ -0.68
PDPN-201ENST00000294489 MTMR6Q9Y217 621 aa10.79□□□□□ -0.68
PDPN-201ENST00000294489 SNED1Q8TER0 1413 aa10.79□□□□□ -0.68
PDPN-201ENST00000294489 SLX4Q8IY92 1834 aa10.79□□□□□ -0.68
PDPN-201ENST00000294489 MYH2Q9UKX2 1941 aa10.79□□□□□ -0.68
PDPN-201ENST00000294489 CSPP1Q1MSJ5 1256 aa10.79□□□□□ -0.68
PDPN-201ENST00000294489 ZNF804AQ7Z570 1209 aa10.79□□□□□ -0.68
PDPN-201ENST00000294489 TBC1D16Q8TBP0 767 aa10.79□□□□□ -0.68
PDPN-201ENST00000294489 LRRC2Q9BYS8 371 aa10.79□□□□□ -0.68
PDPN-201ENST00000294489 STK32BQ9NY57 414 aa10.79□□□□□ -0.68
PDPN-201ENST00000294489 GGA1Q9UJY5 639 aa10.79□□□□□ -0.68
PDPN-201ENST00000294489 ALDH1B1P30837 517 aa10.78□□□□□ -0.68
PDPN-201ENST00000294489 STYK1Q6J9G0 422 aa10.78□□□□□ -0.68
PDPN-201ENST00000294489 GIMAP6Q6P9H5 292 aa10.78□□□□□ -0.68
PDPN-201ENST00000294489 GPT2Q8TD30 523 aa10.78□□□□□ -0.68
PDPN-201ENST00000294489 MASTLQ96GX5 879 aa10.78□□□□□ -0.68
PDPN-201ENST00000294489 ARMT1Q9H993 441 aa10.78□□□□□ -0.68
PDPN-201ENST00000294489 POLLQ9UGP5 575 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms