RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 TEPSINQ96N21 525 aa11.92□□□□□ -0.5
HMHB1-201ENST00000289448 USP2O75604 605 aaPredicted RBP11.91□□□□□ -0.5
HMHB1-201ENST00000289448 CIAO1O76071 339 aa11.91□□□□□ -0.5
HMHB1-201ENST00000289448 TBC1D8O95759 1140 aa11.91□□□□□ -0.5
HMHB1-201ENST00000289448 DGKZQ13574 1117 aa11.91□□□□□ -0.5
HMHB1-201ENST00000289448 SUPT20HL1Q3ZLR7 823 aa11.91□□□□□ -0.5
HMHB1-201ENST00000289448 SPRYD7Q5W111 196 aa11.91□□□□□ -0.5
HMHB1-201ENST00000289448 TBC1D22AQ8WUA7 517 aa11.91□□□□□ -0.5
HMHB1-201ENST00000289448 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.91□□□□□ -0.5
HMHB1-201ENST00000289448 HTTP42858 3142 aa11.9□□□□□ -0.5
HMHB1-201ENST00000289448 CCDC85CA6NKD9 419 aa11.9□□□□□ -0.5
HMHB1-201ENST00000289448 TCP10L2B9ZVM9 353 aa11.9□□□□□ -0.5
HMHB1-201ENST00000289448 PPP1R12BO60237 982 aaPredicted RBP11.9□□□□□ -0.5
HMHB1-201ENST00000289448 SLC5A1P13866 664 aa11.9□□□□□ -0.5
HMHB1-201ENST00000289448 TRIM27P14373 513 aa11.9□□□□□ -0.5
HMHB1-201ENST00000289448 CACNB3P54284 484 aa11.9□□□□□ -0.5
HMHB1-201ENST00000289448 HDLBPQ00341 1268 aaKnown RBP11.9□□□□□ -0.5
HMHB1-201ENST00000289448 SLC10A4Q96EP9 437 aa11.9□□□□□ -0.5
HMHB1-201ENST00000289448 TMEM39BQ9GZU3 492 aa11.9□□□□□ -0.5
HMHB1-201ENST00000289448 R3HDMLQ9H3Y0 253 aa11.9□□□□□ -0.5
HMHB1-201ENST00000289448 COPRSQ9NQ92 184 aa11.9□□□□□ -0.5
HMHB1-201ENST00000289448 CEP126Q9P2H0 1117 aa11.9□□□□□ -0.5
HMHB1-201ENST00000289448 FBXO3Q9UK99 471 aa11.9□□□□□ -0.5
HMHB1-201ENST00000289448 ECM29Q5VYK3 1845 aa11.89□□□□□ -0.51
HMHB1-201ENST00000289448 GJA5P36382 358 aa11.89□□□□□ -0.51
HMHB1-201ENST00000289448 ATP2B3Q16720 1220 aa11.89□□□□□ -0.51
HMHB1-201ENST00000289448 APOBEC3HQ6NTF7 200 aaKnown RBP11.89□□□□□ -0.51
HMHB1-201ENST00000289448 ATF7IPQ6VMQ6 1270 aa11.89□□□□□ -0.51
HMHB1-201ENST00000289448 FRAT1Q92837 279 aaPredicted RBP11.89□□□□□ -0.51
HMHB1-201ENST00000289448 TEKT1Q969V4 418 aa11.89□□□□□ -0.51
HMHB1-201ENST00000289448 CLUAP1Q96AJ1 413 aa11.89□□□□□ -0.51
HMHB1-201ENST00000289448 WNK4Q96J92 1243 aa11.89□□□□□ -0.51
HMHB1-201ENST00000289448 ZDHHC15Q96MV8 337 aa11.89□□□□□ -0.51
HMHB1-201ENST00000289448 MRIQ9BWK5 157 aa11.89□□□□□ -0.51
HMHB1-201ENST00000289448 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.89□□□□□ -0.51
HMHB1-201ENST00000289448 AKAP11Q9UKA4 1901 aa11.89□□□□□ -0.51
HMHB1-201ENST00000289448 ARAP2Q8WZ64 1704 aa11.89□□□□□ -0.51
HMHB1-201ENST00000289448 ADORA1P30542 326 aa11.88□□□□□ -0.51
HMHB1-201ENST00000289448 IL15P40933 162 aaPredicted RBP11.88□□□□□ -0.51
HMHB1-201ENST00000289448 PHKA1P46020 1223 aa11.88□□□□□ -0.51
HMHB1-201ENST00000289448 HNRNPUQ00839 825 aaKnown RBP eCLIP11.88□□□□□ -0.51
HMHB1-201ENST00000289448 TNFAIP1Q13829 316 aa11.88□□□□□ -0.51
HMHB1-201ENST00000289448 SUGT1Q9Y2Z0 365 aa11.88□□□□□ -0.51
HMHB1-201ENST00000289448 IPO8O15397 1037 aaKnown RBP11.87□□□□□ -0.51
HMHB1-201ENST00000289448 SRGAP3O43295 1099 aa11.87□□□□□ -0.51
HMHB1-201ENST00000289448 GNAI3P08754 354 aa11.87□□□□□ -0.51
HMHB1-201ENST00000289448 PRDX5P30044 214 aa11.87□□□□□ -0.51
HMHB1-201ENST00000289448 IREB2P48200 963 aaKnown RBP11.87□□□□□ -0.51
HMHB1-201ENST00000289448 TIMM10P62072 90 aa11.87□□□□□ -0.51
HMHB1-201ENST00000289448 SREBF2Q12772 1141 aa11.87□□□□□ -0.51
HMHB1-201ENST00000289448 MTX1Q13505 466 aa11.87□□□□□ -0.51
HMHB1-201ENST00000289448 HHIPL2Q6UWX4 724 aa11.87□□□□□ -0.51
HMHB1-201ENST00000289448 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.87□□□□□ -0.51
HMHB1-201ENST00000289448 WDR66Q8TBY9 1149 aa11.87□□□□□ -0.51
HMHB1-201ENST00000289448 ZNF296Q8WUU4 475 aaPredicted RBP11.87□□□□□ -0.51
HMHB1-201ENST00000289448 HDAC5Q9UQL6 1122 aa11.87□□□□□ -0.51
HMHB1-201ENST00000289448 CENPFP49454 3210 aa11.87□□□□□ -0.51
HMHB1-201ENST00000289448 UNCXA6NJT0 531 aa11.86□□□□□ -0.51
HMHB1-201ENST00000289448 GPR25O00155 361 aa11.86□□□□□ -0.51
HMHB1-201ENST00000289448 IGF2BP3O00425 579 aaKnown RBP eCLIP11.86□□□□□ -0.51
HMHB1-201ENST00000289448 ZBTB48P10074 688 aaPredicted RBP11.86□□□□□ -0.51
HMHB1-201ENST00000289448 TFCP2Q12800 502 aa11.86□□□□□ -0.51
HMHB1-201ENST00000289448 DIXDC1Q155Q3 683 aa11.86□□□□□ -0.51
HMHB1-201ENST00000289448 CCDC102BQ68D86 513 aa11.86□□□□□ -0.51
HMHB1-201ENST00000289448 CTU1Q7Z7A3 348 aaKnown RBP11.86□□□□□ -0.51
HMHB1-201ENST00000289448 ANKRD13AQ8IZ07 590 aa11.86□□□□□ -0.51
HMHB1-201ENST00000289448 CNKSR2Q8WXI2 1034 aa11.86□□□□□ -0.51
HMHB1-201ENST00000289448 CFHR5Q9BXR6 569 aa11.86□□□□□ -0.51
HMHB1-201ENST00000289448 ELP3Q9H9T3 547 aa11.86□□□□□ -0.51
HMHB1-201ENST00000289448 MAST3O60307 1309 aa11.86□□□□□ -0.51
HMHB1-201ENST00000289448 PNMA6EA0A0J9YXQ4 647 aa11.85□□□□□ -0.51
HMHB1-201ENST00000289448 MANSC4A6NHS7 340 aaPredicted RBP11.85□□□□□ -0.51
HMHB1-201ENST00000289448 GNAI2P04899 355 aa11.85□□□□□ -0.51
HMHB1-201ENST00000289448 TNNI2P48788 182 aa11.85□□□□□ -0.51
HMHB1-201ENST00000289448 CDC42EP5Q6NZY7 148 aa11.85□□□□□ -0.51
HMHB1-201ENST00000289448 IFNL1Q8IU54 200 aa11.85□□□□□ -0.51
HMHB1-201ENST00000289448 TMEM57Q8N5G2 664 aa11.85□□□□□ -0.51
HMHB1-201ENST00000289448 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.85□□□□□ -0.51
HMHB1-201ENST00000289448 PTPN18Q99952 460 aa11.85□□□□□ -0.51
HMHB1-201ENST00000289448 DAGLAQ9Y4D2 1042 aa11.85□□□□□ -0.51
HMHB1-201ENST00000289448 TNRC18O15417 2968 aaPredicted RBP11.85□□□□□ -0.51
HMHB1-201ENST00000289448 A0A1B0GUL7 405 aa11.84□□□□□ -0.51
HMHB1-201ENST00000289448 RLBP1P12271 317 aa11.84□□□□□ -0.51
HMHB1-201ENST00000289448 RGS19P49795 217 aa11.84□□□□□ -0.51
HMHB1-201ENST00000289448 INHBEP58166 350 aa11.84□□□□□ -0.51
HMHB1-201ENST00000289448 MAP3K9P80192 1104 aa11.84□□□□□ -0.51
HMHB1-201ENST00000289448 NFIAQ12857 509 aa11.84□□□□□ -0.51
HMHB1-201ENST00000289448 RASGRF1Q13972 1273 aa11.84□□□□□ -0.51
HMHB1-201ENST00000289448 VGLL4Q14135 290 aa11.84□□□□□ -0.51
HMHB1-201ENST00000289448 NOM1Q5C9Z4 860 aaKnown RBP11.84□□□□□ -0.51
HMHB1-201ENST00000289448 FKBP1CQ5VVH2 108 aa11.84□□□□□ -0.51
HMHB1-201ENST00000289448 ZKSCAN2Q63HK3 967 aa11.84□□□□□ -0.51
HMHB1-201ENST00000289448 FAM83AQ86UY5 434 aa11.84□□□□□ -0.51
HMHB1-201ENST00000289448 OPTNQ96CV9 577 aa11.84□□□□□ -0.51
HMHB1-201ENST00000289448 XAGE2Q96GT9 111 aa11.84□□□□□ -0.51
HMHB1-201ENST00000289448 MS4A4AQ96JQ5 239 aa11.84□□□□□ -0.51
HMHB1-201ENST00000289448 GNL3LQ9NVN8 582 aaKnown RBP11.84□□□□□ -0.51
HMHB1-201ENST00000289448 SALL1Q9NSC2 1324 aa11.84□□□□□ -0.51
HMHB1-201ENST00000289448 TESPA1A2RU30 521 aaPredicted RBP11.83□□□□□ -0.52
HMHB1-201ENST00000289448 SEMA3EO15041 775 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms