RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 SEC62Q99442 399 aaKnown RBP26.36■■□□□ 1.81
PDLIM3-203ENST00000284771 GMLQ99445 158 aa26.36■■□□□ 1.81
PDLIM3-203ENST00000284771 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.36■■□□□ 1.81
PDLIM3-203ENST00000284771 RFX7Q2KHR2 1363 aa26.36■■□□□ 1.81
PDLIM3-203ENST00000284771 ZNF532Q9HCE3 1301 aa26.35■■□□□ 1.81
PDLIM3-203ENST00000284771 NMIQ13287 307 aaPredicted RBP26.35■■□□□ 1.81
PDLIM3-203ENST00000284771 CWC27Q6UX04 472 aaKnown RBP26.35■■□□□ 1.81
PDLIM3-203ENST00000284771 A0A0D9SFI3 127 aa26.34■■□□□ 1.81
PDLIM3-203ENST00000284771 F8W031 263 aaPredicted RBP26.34■■□□□ 1.81
PDLIM3-203ENST00000284771 UBE3CQ15386 1083 aa26.34■■□□□ 1.81
PDLIM3-203ENST00000284771 DIXDC1Q155Q3 683 aa26.34■■□□□ 1.81
PDLIM3-203ENST00000284771 TICAM2Q86XR7 235 aa26.34■■□□□ 1.81
PDLIM3-203ENST00000284771 KIAA0825Q8IV33 1275 aa26.34■■□□□ 1.81
PDLIM3-203ENST00000284771 SUGT1Q9Y2Z0 365 aa26.34■■□□□ 1.81
PDLIM3-203ENST00000284771 EIF6P56537 245 aaKnown RBP26.34■■□□□ 1.81
PDLIM3-203ENST00000284771 ZMYM1Q5SVZ6 1142 aa26.34■■□□□ 1.81
PDLIM3-203ENST00000284771 OSBP2Q969R2 916 aa26.34■■□□□ 1.81
PDLIM3-203ENST00000284771 ZFYP08048 801 aaPredicted RBP26.33■■□□□ 1.81
PDLIM3-203ENST00000284771 PUS7LQ9H0K6 701 aaKnown RBP26.33■■□□□ 1.81
PDLIM3-203ENST00000284771 TTF2Q9UNY4 1162 aaKnown RBP26.33■■□□□ 1.81
PDLIM3-203ENST00000284771 TIAM2Q8IVF5 1701 aa26.33■■□□□ 1.8
PDLIM3-203ENST00000284771 NAA16Q6N069 864 aaPredicted RBP26.32■■□□□ 1.8
PDLIM3-203ENST00000284771 ZSCAN25Q6NSZ9 544 aa26.32■■□□□ 1.8
PDLIM3-203ENST00000284771 DIAPH3Q9NSV4 1193 aa26.32■■□□□ 1.8
PDLIM3-203ENST00000284771 TNIP1Q15025 636 aa26.31■■□□□ 1.8
PDLIM3-203ENST00000284771 DZIP1Q86YF9 867 aaKnown RBP26.31■■□□□ 1.8
PDLIM3-203ENST00000284771 MYH2Q9UKX2 1941 aa26.31■■□□□ 1.8
PDLIM3-203ENST00000284771 HIP1O00291 1037 aa26.31■■□□□ 1.8
PDLIM3-203ENST00000284771 CYP7A1P22680 504 aa26.31■■□□□ 1.8
PDLIM3-203ENST00000284771 APPBP2Q92624 585 aa26.31■■□□□ 1.8
PDLIM3-203ENST00000284771 IGSF3O75054 1194 aa26.3■■□□□ 1.8
PDLIM3-203ENST00000284771 SCNN1DP51172 638 aa26.3■■□□□ 1.8
PDLIM3-203ENST00000284771 LRRFIP1Q32MZ4 808 aaKnown RBP26.3■■□□□ 1.8
PDLIM3-203ENST00000284771 AGBL3Q8NEM8 1001 aa26.3■■□□□ 1.8
PDLIM3-203ENST00000284771 MYO3BQ8WXR4 1341 aa26.3■■□□□ 1.8
PDLIM3-203ENST00000284771 MAST2Q6P0Q8 1798 aa26.29■■□□□ 1.8
PDLIM3-203ENST00000284771 M0R2C6 588 aa26.29■■□□□ 1.8
PDLIM3-203ENST00000284771 SEC24BO95487 1268 aa26.29■■□□□ 1.8
PDLIM3-203ENST00000284771 ZNF589Q86UQ0 364 aaPredicted RBP26.29■■□□□ 1.8
PDLIM3-203ENST00000284771 ESYT1Q9BSJ8 1104 aa26.29■■□□□ 1.8
PDLIM3-203ENST00000284771 GJA3Q9Y6H8 435 aa26.29■■□□□ 1.8
PDLIM3-203ENST00000284771 SGSM2O43147 1006 aa26.28■■□□□ 1.8
PDLIM3-203ENST00000284771 CCDC129Q6ZRS4 1044 aa26.28■■□□□ 1.8
PDLIM3-203ENST00000284771 MIGA1Q8NAN2 632 aa26.28■■□□□ 1.8
PDLIM3-203ENST00000284771 PCDHAC2Q9Y5I4 1007 aa26.28■■□□□ 1.8
PDLIM3-203ENST00000284771 MAST3O60307 1309 aa26.28■■□□□ 1.8
PDLIM3-203ENST00000284771 ADAMTSL1Q8N6G6 1762 aa26.28■■□□□ 1.8
PDLIM3-203ENST00000284771 SHTN1A0MZ66 631 aa26.28■■□□□ 1.8
PDLIM3-203ENST00000284771 FAM163AQ96GL9 167 aaPredicted RBP26.28■■□□□ 1.8
PDLIM3-203ENST00000284771 HELLSQ9NRZ9 838 aa26.28■■□□□ 1.8
PDLIM3-203ENST00000284771 MCMDC2Q4G0Z9 681 aa26.27■■□□□ 1.8
PDLIM3-203ENST00000284771 GPC2Q8N158 579 aa26.27■■□□□ 1.8
PDLIM3-203ENST00000284771 DDNO94850 711 aaPredicted RBP26.26■■□□□ 1.79
PDLIM3-203ENST00000284771 GMPSP49915 693 aaPredicted RBP26.26■■□□□ 1.79
PDLIM3-203ENST00000284771 MRIQ9BWK5 157 aa26.26■■□□□ 1.79
PDLIM3-203ENST00000284771 GAKO14976 1311 aa26.26■■□□□ 1.79
PDLIM3-203ENST00000284771 CASC1Q6TDU7 716 aa26.25■■□□□ 1.79
PDLIM3-203ENST00000284771 RIOK1Q9BRS2 568 aaKnown RBP26.25■■□□□ 1.79
PDLIM3-203ENST00000284771 BACH2Q9BYV9 841 aa26.25■■□□□ 1.79
PDLIM3-203ENST00000284771 DAGLAQ9Y4D2 1042 aa26.25■■□□□ 1.79
PDLIM3-203ENST00000284771 MROH7-TTC4A0A0A0MT08 1334 aa26.25■■□□□ 1.79
PDLIM3-203ENST00000284771 USP17L8P0C7I0 530 aa26.25■■□□□ 1.79
PDLIM3-203ENST00000284771 RPS12P25398 132 aaKnown RBP26.25■■□□□ 1.79
PDLIM3-203ENST00000284771 CRKP46108 304 aa26.25■■□□□ 1.79
PDLIM3-203ENST00000284771 DYNLL1P63167 89 aaKnown RBP26.25■■□□□ 1.79
PDLIM3-203ENST00000284771 GSTO1P78417 241 aa26.25■■□□□ 1.79
PDLIM3-203ENST00000284771 TMED8Q6PL24 325 aaPredicted RBP26.25■■□□□ 1.79
PDLIM3-203ENST00000284771 HHIPL2Q6UWX4 724 aa26.25■■□□□ 1.79
PDLIM3-203ENST00000284771 DPF2Q92785 391 aa26.25■■□□□ 1.79
PDLIM3-203ENST00000284771 AATFQ9NY61 560 aaKnown RBP eCLIP26.25■■□□□ 1.79
PDLIM3-203ENST00000284771 HDLBPQ00341 1268 aaKnown RBP26.24■■□□□ 1.79
PDLIM3-203ENST00000284771 RUFY2Q8WXA3 655 aa26.24■■□□□ 1.79
PDLIM3-203ENST00000284771 SERPINA10Q9UK55 444 aa26.24■■□□□ 1.79
PDLIM3-203ENST00000284771 GPR75-ASB3A0A0A6YYF3 556 aa26.23■■□□□ 1.79
PDLIM3-203ENST00000284771 GPAA1O43292 621 aa26.23■■□□□ 1.79
PDLIM3-203ENST00000284771 LDHCP07864 332 aa26.23■■□□□ 1.79
PDLIM3-203ENST00000284771 APOBEC3HQ6NTF7 200 aaKnown RBP26.23■■□□□ 1.79
PDLIM3-203ENST00000284771 LCORLQ8N3X6 602 aa26.23■■□□□ 1.79
PDLIM3-203ENST00000284771 TEKT1Q969V4 418 aa26.23■■□□□ 1.79
PDLIM3-203ENST00000284771 ARMT1Q9H993 441 aa26.23■■□□□ 1.79
PDLIM3-203ENST00000284771 MBD4O95243 580 aa26.22■■□□□ 1.79
PDLIM3-203ENST00000284771 STRBPQ96SI9 672 aaKnown RBP26.22■■□□□ 1.79
PDLIM3-203ENST00000284771 VPS53Q5VIR6 699 aa26.22■■□□□ 1.79
PDLIM3-203ENST00000284771 OGFOD1Q8N543 542 aa26.22■■□□□ 1.79
PDLIM3-203ENST00000284771 ZDHHC15Q96MV8 337 aa26.22■■□□□ 1.79
PDLIM3-203ENST00000284771 CNOT7Q9UIV1 285 aaKnown RBP26.22■■□□□ 1.79
PDLIM3-203ENST00000284771 RAD50Q92878 1312 aa26.22■■□□□ 1.79
PDLIM3-203ENST00000284771 ZC3H4Q9UPT8 1303 aaKnown RBP26.22■■□□□ 1.79
PDLIM3-203ENST00000284771 MAGEB6P1A0A0J9YX57 407 aa26.21■■□□□ 1.79
PDLIM3-203ENST00000284771 DCAF8L1A6NGE4 600 aa26.21■■□□□ 1.79
PDLIM3-203ENST00000284771 FOXP2O15409 715 aa26.21■■□□□ 1.79
PDLIM3-203ENST00000284771 EGFRP00533 1210 aa26.21■■□□□ 1.79
PDLIM3-203ENST00000284771 BTDP43251 543 aa26.21■■□□□ 1.79
PDLIM3-203ENST00000284771 PPP4CP60510 307 aa26.21■■□□□ 1.79
PDLIM3-203ENST00000284771 SLF2Q8IX21 1173 aa26.21■■□□□ 1.79
PDLIM3-203ENST00000284771 AIDAQ96BJ3 306 aa26.21■■□□□ 1.79
PDLIM3-203ENST00000284771 CCDC171Q6TFL3 1326 aa26.21■■□□□ 1.79
PDLIM3-203ENST00000284771 ZNF280AP59817 542 aaPredicted RBP26.2■■□□□ 1.78
PDLIM3-203ENST00000284771 CFAP100Q494V2 611 aa26.2■■□□□ 1.78
PDLIM3-203ENST00000284771 MICALL2Q8IY33 904 aa26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms