RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 CYB5R4Q7L1T6 521 aa7.08□□□□□ -1.28
TNFSF4-201ENST00000281834 AMIGO3Q86WK7 504 aa7.08□□□□□ -1.28
TNFSF4-201ENST00000281834 SMARCC1Q92922 1105 aaPredicted RBP7.08□□□□□ -1.28
TNFSF4-201ENST00000281834 CDC5LQ99459 802 aaKnown RBP7.08□□□□□ -1.28
TNFSF4-201ENST00000281834 SCAND2PQ9GZW5 306 aaPredicted RBP7.08□□□□□ -1.28
TNFSF4-201ENST00000281834 KIF3AQ9Y496 699 aa7.08□□□□□ -1.28
TNFSF4-201ENST00000281834 DISP2A7MBM2 1401 aa7.08□□□□□ -1.28
TNFSF4-201ENST00000281834 GLI3P10071 1580 aa7.08□□□□□ -1.28
TNFSF4-201ENST00000281834 MROH5Q6ZUA9 1318 aa7.08□□□□□ -1.28
TNFSF4-201ENST00000281834 METAP2P50579 478 aaKnown RBP eCLIP7.08□□□□□ -1.28
TNFSF4-201ENST00000281834 ANTXR2P58335 489 aa7.08□□□□□ -1.28
TNFSF4-201ENST00000281834 PARP10Q53GL7 1025 aa7.08□□□□□ -1.28
TNFSF4-201ENST00000281834 TOGARAM1Q9Y4F4 1720 aa7.08□□□□□ -1.28
TNFSF4-201ENST00000281834 NEDD4P46934 1319 aa7.08□□□□□ -1.28
TNFSF4-201ENST00000281834 MARCKSP29966 332 aaPredicted RBP7.08□□□□□ -1.28
TNFSF4-201ENST00000281834 MAP3K11Q16584 847 aa7.08□□□□□ -1.28
TNFSF4-201ENST00000281834 ISM2Q6H9L7 571 aa7.08□□□□□ -1.28
TNFSF4-201ENST00000281834 LUZP1Q86V48 1076 aa7.08□□□□□ -1.28
TNFSF4-201ENST00000281834 DRC7Q8IY82 874 aa7.08□□□□□ -1.28
TNFSF4-201ENST00000281834 PGBD1Q96JS3 809 aa7.08□□□□□ -1.28
TNFSF4-201ENST00000281834 FBXO3Q9UK99 471 aa7.08□□□□□ -1.28
TNFSF4-201ENST00000281834 ADCY5O95622 1261 aa7.07□□□□□ -1.28
TNFSF4-201ENST00000281834 RFC4P35249 363 aa7.07□□□□□ -1.28
TNFSF4-201ENST00000281834 DYNLL1P63167 89 aaKnown RBP7.07□□□□□ -1.28
TNFSF4-201ENST00000281834 HMGN5P82970 282 aaKnown RBP7.07□□□□□ -1.28
TNFSF4-201ENST00000281834 IFNL3Q8IZI9 196 aa7.07□□□□□ -1.28
TNFSF4-201ENST00000281834 C17orf53Q8N3J3 647 aaPredicted RBP7.07□□□□□ -1.28
TNFSF4-201ENST00000281834 STRBPQ96SI9 672 aaKnown RBP7.07□□□□□ -1.28
TNFSF4-201ENST00000281834 EPB41L4AQ9HCS5 686 aaPredicted RBP7.07□□□□□ -1.28
TNFSF4-201ENST00000281834 ANKIB1Q9P2G1 1089 aa7.07□□□□□ -1.28
TNFSF4-201ENST00000281834 THRAP3Q9Y2W1 955 aaKnown RBP7.07□□□□□ -1.28
TNFSF4-201ENST00000281834 ABCC6O95255 1503 aa7.07□□□□□ -1.28
TNFSF4-201ENST00000281834 GOLGA8AA7E2F4 631 aa7.07□□□□□ -1.28
TNFSF4-201ENST00000281834 RANBP6O60518 1105 aaKnown RBP7.07□□□□□ -1.28
TNFSF4-201ENST00000281834 RESTQ13127 1097 aa7.07□□□□□ -1.28
TNFSF4-201ENST00000281834 STK38Q15208 465 aa7.07□□□□□ -1.28
TNFSF4-201ENST00000281834 CAVIN4Q5BKX8 364 aa7.07□□□□□ -1.28
TNFSF4-201ENST00000281834 DNTTIP2Q5QJE6 756 aaKnown RBP7.07□□□□□ -1.28
TNFSF4-201ENST00000281834 NLRP3Q96P20 1036 aa7.07□□□□□ -1.28
TNFSF4-201ENST00000281834 SLC26A6Q9BXS9 759 aa7.07□□□□□ -1.28
TNFSF4-201ENST00000281834 NBPF3Q9H094 633 aa7.07□□□□□ -1.28
TNFSF4-201ENST00000281834 TTC12Q9H892 705 aaPredicted RBP7.07□□□□□ -1.28
TNFSF4-201ENST00000281834 RTCBQ9Y3I0 505 aaKnown RBP7.07□□□□□ -1.28
TNFSF4-201ENST00000281834 A0A1B0GVL5 298 aa7.07□□□□□ -1.28
TNFSF4-201ENST00000281834 CCDC69A6NI79 296 aa7.07□□□□□ -1.28
TNFSF4-201ENST00000281834 CCDC192P0DO97 292 aa7.07□□□□□ -1.28
TNFSF4-201ENST00000281834 FDPSP14324 419 aaKnown RBP7.07□□□□□ -1.28
TNFSF4-201ENST00000281834 SYNE3Q6ZMZ3 975 aa7.07□□□□□ -1.28
TNFSF4-201ENST00000281834 MFSD6Q6ZSS7 791 aa7.07□□□□□ -1.28
TNFSF4-201ENST00000281834 ADGRA1Q86SQ6 560 aa7.07□□□□□ -1.28
TNFSF4-201ENST00000281834 CCAR1Q8IX12 1150 aaKnown RBP7.07□□□□□ -1.28
TNFSF4-201ENST00000281834 MB21D2Q8IYB1 491 aaPredicted RBP7.07□□□□□ -1.28
TNFSF4-201ENST00000281834 SDF4Q9BRK5 362 aa7.07□□□□□ -1.28
TNFSF4-201ENST00000281834 DNAJC25Q9H1X3 360 aa7.07□□□□□ -1.28
TNFSF4-201ENST00000281834 ANGEL1Q9UNK9 670 aaKnown RBP7.07□□□□□ -1.28
TNFSF4-201ENST00000281834 CARMIL3Q8ND23 1372 aa7.06□□□□□ -1.28
TNFSF4-201ENST00000281834 BIN1O00499 593 aa7.06□□□□□ -1.28
TNFSF4-201ENST00000281834 EVX2Q03828 476 aa7.06□□□□□ -1.28
TNFSF4-201ENST00000281834 UBE3CQ15386 1083 aa7.06□□□□□ -1.28
TNFSF4-201ENST00000281834 ANO6Q4KMQ2 910 aa7.06□□□□□ -1.28
TNFSF4-201ENST00000281834 SASS6Q6UVJ0 657 aa7.06□□□□□ -1.28
TNFSF4-201ENST00000281834 CCDC73Q6ZRK6 1079 aa7.06□□□□□ -1.28
TNFSF4-201ENST00000281834 FAM196AQ6ZSG2 479 aa7.06□□□□□ -1.28
TNFSF4-201ENST00000281834 ZSCAN30Q86W11 494 aa7.06□□□□□ -1.28
TNFSF4-201ENST00000281834 FSIP1Q8NA03 581 aa7.06□□□□□ -1.28
TNFSF4-201ENST00000281834 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.06□□□□□ -1.28
TNFSF4-201ENST00000281834 NACAP1Q9BZK3 213 aa7.06□□□□□ -1.28
TNFSF4-201ENST00000281834 AATFQ9NY61 560 aaKnown RBP eCLIP7.06□□□□□ -1.28
TNFSF4-201ENST00000281834 ZSWIM5Q9P217 1185 aa7.06□□□□□ -1.28
TNFSF4-201ENST00000281834 CFAP45Q9UL16 551 aa7.06□□□□□ -1.28
TNFSF4-201ENST00000281834 SLC12A7Q9Y666 1083 aa7.06□□□□□ -1.28
TNFSF4-201ENST00000281834 ZBTB43O43298 467 aa7.06□□□□□ -1.28
TNFSF4-201ENST00000281834 DHX16O60231 1041 aaKnown RBP7.06□□□□□ -1.28
TNFSF4-201ENST00000281834 FGFR2P21802 821 aa7.06□□□□□ -1.28
TNFSF4-201ENST00000281834 TMEM87AQ8NBN3 555 aa7.06□□□□□ -1.28
TNFSF4-201ENST00000281834 AK7Q96M32 723 aa7.06□□□□□ -1.28
TNFSF4-201ENST00000281834 ALG1Q9BT22 464 aa7.06□□□□□ -1.28
TNFSF4-201ENST00000281834 BCL11BQ9C0K0 894 aaPredicted RBP7.06□□□□□ -1.28
TNFSF4-201ENST00000281834 GNL3LQ9NVN8 582 aaKnown RBP7.06□□□□□ -1.28
TNFSF4-201ENST00000281834 MINPP1Q9UNW1 487 aa7.06□□□□□ -1.28
TNFSF4-201ENST00000281834 RFX7Q2KHR2 1363 aa7.06□□□□□ -1.28
TNFSF4-201ENST00000281834 PLEKHG2Q9H7P9 1386 aa7.06□□□□□ -1.28
TNFSF4-201ENST00000281834 JCADQ9P266 1359 aa7.06□□□□□ -1.28
TNFSF4-201ENST00000281834 ERICH2A1L162 156 aa7.06□□□□□ -1.28
TNFSF4-201ENST00000281834 ARID4AP29374 1257 aaPredicted RBP7.06□□□□□ -1.28
TNFSF4-201ENST00000281834 CDC27P30260 824 aa7.06□□□□□ -1.28
TNFSF4-201ENST00000281834 RPS8P62241 208 aaKnown RBP7.06□□□□□ -1.28
TNFSF4-201ENST00000281834 TYRO3Q06418 890 aa7.06□□□□□ -1.28
TNFSF4-201ENST00000281834 CPLX2Q6PUV4 134 aaKnown RBP7.06□□□□□ -1.28
TNFSF4-201ENST00000281834 TXNRD3Q86VQ6 643 aa7.06□□□□□ -1.28
TNFSF4-201ENST00000281834 ARHGEF1Q92888 912 aaKnown RBP7.06□□□□□ -1.28
TNFSF4-201ENST00000281834 ZNF274Q96GC6 653 aaPredicted RBP7.06□□□□□ -1.28
TNFSF4-201ENST00000281834 CLIC4Q9Y696 253 aa7.06□□□□□ -1.28
TNFSF4-201ENST00000281834 ABCC12Q96J65 1359 aa7.05□□□□□ -1.28
TNFSF4-201ENST00000281834 BAZ2BQ9UIF8 2168 aaKnown RBP7.05□□□□□ -1.28
TNFSF4-201ENST00000281834 GSG1L2A8MUP6 293 aa7.05□□□□□ -1.28
TNFSF4-201ENST00000281834 KINO60870 393 aaKnown RBP7.05□□□□□ -1.28
TNFSF4-201ENST00000281834 PRDX5P30044 214 aa7.05□□□□□ -1.28
TNFSF4-201ENST00000281834 ZRSR1Q15695 479 aaKnown RBP7.05□□□□□ -1.28
TNFSF4-201ENST00000281834 SPECC1Q5M775 1068 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms