RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 DACT1Q9NYF0 836 aa15.17■□□□□ 0.02
C9orf3-201ENST00000277198 MRVI1Q9Y6F6 885 aa15.17■□□□□ 0.02
C9orf3-201ENST00000277198 DLEC1Q9Y238 1755 aa15.17■□□□□ 0.02
C9orf3-201ENST00000277198 RASSF7Q02833 373 aa15.16■□□□□ 0.02
C9orf3-201ENST00000277198 RESTQ13127 1097 aa15.16■□□□□ 0.02
C9orf3-201ENST00000277198 COL9A3Q14050 684 aaPredicted RBP15.16■□□□□ 0.02
C9orf3-201ENST00000277198 DNTTIP2Q5QJE6 756 aaKnown RBP15.16■□□□□ 0.02
C9orf3-201ENST00000277198 C3orf67Q6ZVT6 689 aa15.16■□□□□ 0.02
C9orf3-201ENST00000277198 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.16■□□□□ 0.02
C9orf3-201ENST00000277198 FBXL16Q8N461 479 aa15.16■□□□□ 0.02
C9orf3-201ENST00000277198 KIAA1524Q8TCG1 905 aa15.16■□□□□ 0.02
C9orf3-201ENST00000277198 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.16■□□□□ 0.02
C9orf3-201ENST00000277198 EDC3Q96F86 508 aaKnown RBP15.16■□□□□ 0.02
C9orf3-201ENST00000277198 H3BQV1 296 aa15.16■□□□□ 0.02
C9orf3-201ENST00000277198 RGL2O15211 777 aa15.16■□□□□ 0.02
C9orf3-201ENST00000277198 SRGNP10124 158 aa15.16■□□□□ 0.02
C9orf3-201ENST00000277198 PDE6BP35913 854 aa15.16■□□□□ 0.02
C9orf3-201ENST00000277198 PRELPP51888 382 aa15.16■□□□□ 0.02
C9orf3-201ENST00000277198 FOXO4P98177 505 aa15.16■□□□□ 0.02
C9orf3-201ENST00000277198 IFFO2Q5TF58 517 aa15.16■□□□□ 0.02
C9orf3-201ENST00000277198 LMBR1LQ6UX01 489 aa15.16■□□□□ 0.02
C9orf3-201ENST00000277198 SYNE4Q8N205 404 aa15.16■□□□□ 0.02
C9orf3-201ENST00000277198 TTLL6Q8N841 843 aa15.16■□□□□ 0.02
C9orf3-201ENST00000277198 DNAJC2Q99543 621 aaKnown RBP15.16■□□□□ 0.02
C9orf3-201ENST00000277198 CIAO1O76071 339 aa15.15■□□□□ 0.02
C9orf3-201ENST00000277198 NTSR2O95665 410 aa15.15■□□□□ 0.02
C9orf3-201ENST00000277198 LRRFIP1Q32MZ4 808 aaKnown RBP15.15■□□□□ 0.02
C9orf3-201ENST00000277198 TPTE2Q6XPS3 522 aa15.15■□□□□ 0.02
C9orf3-201ENST00000277198 BRF1Q92994 677 aa15.15■□□□□ 0.02
C9orf3-201ENST00000277198 CWC25Q9NXE8 425 aaPredicted RBP15.15■□□□□ 0.02
C9orf3-201ENST00000277198 ARFGEF1Q9Y6D6 1849 aa15.15■□□□□ 0.02
C9orf3-201ENST00000277198 CTAGE5O15320 804 aa15.15■□□□□ 0.02
C9orf3-201ENST00000277198 STK3Q13188 491 aa15.15■□□□□ 0.02
C9orf3-201ENST00000277198 FAM173BQ6P4H8 233 aa15.15■□□□□ 0.02
C9orf3-201ENST00000277198 CCDC191Q8NCU4 936 aa15.15■□□□□ 0.02
C9orf3-201ENST00000277198 ZNF526Q8TF50 670 aaPredicted RBP15.15■□□□□ 0.02
C9orf3-201ENST00000277198 PAG1Q9NWQ8 432 aa15.15■□□□□ 0.02
C9orf3-201ENST00000277198 FBXO3Q9UK99 471 aa15.15■□□□□ 0.02
C9orf3-201ENST00000277198 ATP5J2-PTCD1G3V325 749 aa15.14■□□□□ 0.01
C9orf3-201ENST00000277198 AP5Z1O43299 807 aa15.14■□□□□ 0.01
C9orf3-201ENST00000277198 HSP90B1P14625 803 aaKnown RBP15.14■□□□□ 0.01
C9orf3-201ENST00000277198 GTF2E1P29083 439 aaPredicted RBP15.14■□□□□ 0.01
C9orf3-201ENST00000277198 EXOSC10Q01780 885 aaKnown RBP15.14■□□□□ 0.01
C9orf3-201ENST00000277198 SCRN1Q12765 414 aa15.14■□□□□ 0.01
C9orf3-201ENST00000277198 ZMYM1Q5SVZ6 1142 aa15.14■□□□□ 0.01
C9orf3-201ENST00000277198 OLFM4Q6UX06 510 aa15.14■□□□□ 0.01
C9orf3-201ENST00000277198 ATG9AQ7Z3C6 839 aa15.14■□□□□ 0.01
C9orf3-201ENST00000277198 TDRD7Q8NHU6 1098 aaKnown RBP15.14■□□□□ 0.01
C9orf3-201ENST00000277198 ZNF830Q96NB3 372 aaPredicted RBP15.14■□□□□ 0.01
C9orf3-201ENST00000277198 TFIP11Q9UBB9 837 aaKnown RBP15.14■□□□□ 0.01
C9orf3-201ENST00000277198 ARFGEF2Q9Y6D5 1785 aa15.14■□□□□ 0.01
C9orf3-201ENST00000277198 C21orf2O43822 256 aa15.13■□□□□ 0.01
C9orf3-201ENST00000277198 JAK2O60674 1132 aa15.13■□□□□ 0.01
C9orf3-201ENST00000277198 FGD1P98174 961 aa15.13■□□□□ 0.01
C9orf3-201ENST00000277198 PLCB2Q00722 1185 aa15.13■□□□□ 0.01
C9orf3-201ENST00000277198 TPRNQ4KMQ1 711 aa15.13■□□□□ 0.01
C9orf3-201ENST00000277198 DDX46Q7L014 1031 aaKnown RBP15.13■□□□□ 0.01
C9orf3-201ENST00000277198 ZNF274Q96GC6 653 aaPredicted RBP15.13■□□□□ 0.01
C9orf3-201ENST00000277198 PGBD1Q96JS3 809 aa15.13■□□□□ 0.01
C9orf3-201ENST00000277198 FAM13BQ9NYF5 915 aa15.13■□□□□ 0.01
C9orf3-201ENST00000277198 RCOR1Q9UKL0 485 aa15.13■□□□□ 0.01
C9orf3-201ENST00000277198 SLX4Q8IY92 1834 aa15.13■□□□□ 0.01
C9orf3-201ENST00000277198 NLRP10Q86W26 655 aa15.13■□□□□ 0.01
C9orf3-201ENST00000277198 BICD2Q8TD16 824 aa15.13■□□□□ 0.01
C9orf3-201ENST00000277198 KLRG2A4D1S0 409 aaPredicted RBP15.12■□□□□ 0.01
C9orf3-201ENST00000277198 EYA2O00167 538 aa15.12■□□□□ 0.01
C9orf3-201ENST00000277198 NFKBIEO00221 500 aa15.12■□□□□ 0.01
C9orf3-201ENST00000277198 TCIRG1Q13488 830 aa15.12■□□□□ 0.01
C9orf3-201ENST00000277198 CAMK4Q16566 473 aa15.12■□□□□ 0.01
C9orf3-201ENST00000277198 ANO6Q4KMQ2 910 aa15.12■□□□□ 0.01
C9orf3-201ENST00000277198 C9orf131Q5VYM1 1079 aa15.12■□□□□ 0.01
C9orf3-201ENST00000277198 CCDC129Q6ZRS4 1044 aa15.12■□□□□ 0.01
C9orf3-201ENST00000277198 NSUN7Q8NE18 718 aaKnown RBP15.12■□□□□ 0.01
C9orf3-201ENST00000277198 SEC62Q99442 399 aaKnown RBP15.12■□□□□ 0.01
C9orf3-201ENST00000277198 CBX8Q9HC52 389 aa15.12■□□□□ 0.01
C9orf3-201ENST00000277198 CACNA1SQ13698 1873 aa15.11■□□□□ 0.01
C9orf3-201ENST00000277198 SPEF2Q9C093 1822 aa15.11■□□□□ 0.01
C9orf3-201ENST00000277198 NR1I2O75469 434 aa15.11■□□□□ 0.01
C9orf3-201ENST00000277198 EVCP57679 992 aa15.11■□□□□ 0.01
C9orf3-201ENST00000277198 STOX1Q6ZVD7 989 aa15.11■□□□□ 0.01
C9orf3-201ENST00000277198 RGS22Q8NE09 1264 aa15.11■□□□□ 0.01
C9orf3-201ENST00000277198 MASTLQ96GX5 879 aa15.11■□□□□ 0.01
C9orf3-201ENST00000277198 ZNF396Q96N95 335 aaPredicted RBP15.11■□□□□ 0.01
C9orf3-201ENST00000277198 RNF113AO15541 343 aaKnown RBP15.11■□□□□ 0.01
C9orf3-201ENST00000277198 CDC25BP30305 580 aa15.11■□□□□ 0.01
C9orf3-201ENST00000277198 STYK1Q6J9G0 422 aa15.11■□□□□ 0.01
C9orf3-201ENST00000277198 PLA2G4DQ86XP0 818 aa15.11■□□□□ 0.01
C9orf3-201ENST00000277198 JARID2Q92833 1246 aaPredicted RBP15.11■□□□□ 0.01
C9orf3-201ENST00000277198 NYXQ9GZU5 481 aa15.11■□□□□ 0.01
C9orf3-201ENST00000277198 KCNF1Q9H3M0 494 aa15.11■□□□□ 0.01
C9orf3-201ENST00000277198 SALL1Q9NSC2 1324 aa15.1■□□□□ 0.01
C9orf3-201ENST00000277198 GOLIM4O00461 696 aa15.1■□□□□ 0.01
C9orf3-201ENST00000277198 DTNBO60941 627 aa15.1■□□□□ 0.01
C9orf3-201ENST00000277198 ZFYP08048 801 aaPredicted RBP15.1■□□□□ 0.01
C9orf3-201ENST00000277198 HSPD1P10809 573 aaKnown RBP15.1■□□□□ 0.01
C9orf3-201ENST00000277198 ADD1P35611 737 aaKnown RBP15.1■□□□□ 0.01
C9orf3-201ENST00000277198 ZNF165P49910 485 aa15.1■□□□□ 0.01
C9orf3-201ENST00000277198 RBM10P98175 930 aaKnown RBP15.1■□□□□ 0.01
C9orf3-201ENST00000277198 CHAF1AQ13111 956 aaPredicted RBP15.1■□□□□ 0.01
C9orf3-201ENST00000277198 PARP10Q53GL7 1025 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms